RNA–Protein interactions for RNA: ENST00000355260.7

NUP98-202, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 5,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-202ENST00000355260 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
NUP98-202ENST00000355260 PLECQ15149 4684 aaKnown RBP3.49□□□□□ -1.85
NUP98-202ENST00000355260 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
NUP98-202ENST00000355260 MEGF8Q7Z7M0 2845 aa3.48□□□□□ -1.85
NUP98-202ENST00000355260 TRRAPQ9Y4A5 3859 aa3.48□□□□□ -1.85
NUP98-202ENST00000355260 LAMA5O15230 3695 aa3.46□□□□□ -1.86
NUP98-202ENST00000355260 DNAH7Q8WXX0 4024 aa3.45□□□□□ -1.86
NUP98-202ENST00000355260 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
NUP98-202ENST00000355260 FAT2Q9NYQ8 4349 aa3.42□□□□□ -1.86
NUP98-202ENST00000355260 VPS13CQ709C8 3753 aa3.42□□□□□ -1.86
NUP98-202ENST00000355260 HSPG2P98160 4391 aa3.42□□□□□ -1.86
NUP98-202ENST00000355260 DNAH5Q8TE73 4624 aa3.41□□□□□ -1.86
NUP98-202ENST00000355260 ZFHX3Q15911 3703 aa3.4□□□□□ -1.86
NUP98-202ENST00000355260 KRTAP12-3P60328 96 aa3.4□□□□□ -1.86
NUP98-202ENST00000355260 MUC3AQ02505 3323 aa3.38□□□□□ -1.87
NUP98-202ENST00000355260 PRKDCP78527 4128 aaKnown RBP3.38□□□□□ -1.87
NUP98-202ENST00000355260 LORP23490 312 aaPredicted RBP3.36□□□□□ -1.87
NUP98-202ENST00000355260 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
NUP98-202ENST00000355260 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
NUP98-202ENST00000355260 STARD9Q9P2P6 4700 aa3.34□□□□□ -1.87
NUP98-202ENST00000355260 PKD1L1Q8TDX9 2849 aa3.34□□□□□ -1.87
NUP98-202ENST00000355260 FBN3Q75N90 2809 aa3.34□□□□□ -1.88
NUP98-202ENST00000355260 ZNF469Q96JG9 3925 aaPredicted RBP3.33□□□□□ -1.88
NUP98-202ENST00000355260 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
NUP98-202ENST00000355260 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
NUP98-202ENST00000355260 HECTD4Q9Y4D8 3996 aa3.3□□□□□ -1.88
NUP98-202ENST00000355260 KRTAP4-1Q9BYQ7 146 aa3.29□□□□□ -1.88
NUP98-202ENST00000355260 FAT1Q14517 4588 aa3.29□□□□□ -1.88
NUP98-202ENST00000355260 HERC1Q15751 4861 aa3.29□□□□□ -1.88
NUP98-202ENST00000355260 APOBP04114 4563 aaKnown RBP3.28□□□□□ -1.88
NUP98-202ENST00000355260 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
NUP98-202ENST00000355260 CSMD2Q7Z408 3487 aa3.26□□□□□ -1.89
NUP98-202ENST00000355260 MYCBP2O75592 4640 aa3.26□□□□□ -1.89
NUP98-202ENST00000355260 MT1HP80294 61 aa3.25□□□□□ -1.89
NUP98-202ENST00000355260 SRRM2Q9UQ35 2752 aaKnown RBP3.25□□□□□ -1.89
NUP98-202ENST00000355260 KRTAP19-8Q3LI54 63 aa3.24□□□□□ -1.89
NUP98-202ENST00000355260 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
NUP98-202ENST00000355260 MT2AP02795 61 aa3.22□□□□□ -1.89
NUP98-202ENST00000355260 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
NUP98-202ENST00000355260 VPS13BQ7Z7G8 4022 aa3.2□□□□□ -1.9
NUP98-202ENST00000355260 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
NUP98-202ENST00000355260 DNHD1Q96M86 4753 aa3.19□□□□□ -1.9
NUP98-202ENST00000355260 RYR2Q92736 4967 aa3.17□□□□□ -1.9
NUP98-202ENST00000355260 PKHD1P08F94 4074 aa3.15□□□□□ -1.91
NUP98-202ENST00000355260 MUC17Q685J3 4493 aa3.15□□□□□ -1.91
NUP98-202ENST00000355260 TNXBP22105 4242 aa3.14□□□□□ -1.91
NUP98-202ENST00000355260 MT1FP04733 61 aa3.12□□□□□ -1.91
NUP98-202ENST00000355260 KMT2AQ03164 3969 aa3.11□□□□□ -1.91
NUP98-202ENST00000355260 PKD1P98161 4303 aa3.1□□□□□ -1.91
NUP98-202ENST00000355260 LYSTQ99698 3801 aa3.1□□□□□ -1.91
NUP98-202ENST00000355260 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
NUP98-202ENST00000355260 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
NUP98-202ENST00000355260 RYR1P21817 5038 aa3.06□□□□□ -1.92
NUP98-202ENST00000355260 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
NUP98-202ENST00000355260 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
NUP98-202ENST00000355260 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
NUP98-202ENST00000355260 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
NUP98-202ENST00000355260 MT1XP80297 61 aa3□□□□□ -1.93
NUP98-202ENST00000355260 COL7A1Q02388 2944 aa3□□□□□ -1.93
NUP98-202ENST00000355260 MT1BP07438 61 aa2.98□□□□□ -1.93
NUP98-202ENST00000355260 KRTAP17-1Q9BYP8 105 aa2.98□□□□□ -1.93
NUP98-202ENST00000355260 LCE2CQ5TA81 110 aa2.98□□□□□ -1.93
NUP98-202ENST00000355260 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
NUP98-202ENST00000355260 RYR3Q15413 4870 aa2.96□□□□□ -1.94
NUP98-202ENST00000355260 CSMD3Q7Z407 3707 aa2.94□□□□□ -1.94
NUP98-202ENST00000355260 KRTAP9-3Q9BYQ3 159 aa2.91□□□□□ -1.94
NUP98-202ENST00000355260 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.94
NUP98-202ENST00000355260 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
NUP98-202ENST00000355260 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
NUP98-202ENST00000355260 LCE2DQ5TA82 110 aaPredicted RBP2.82□□□□□ -1.96
NUP98-202ENST00000355260 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
NUP98-202ENST00000355260 MT1GP13640 62 aa2.8□□□□□ -1.96
NUP98-202ENST00000355260 BIRC6Q9NR09 4857 aa2.79□□□□□ -1.96
NUP98-202ENST00000355260 MT1EP04732 61 aa2.77□□□□□ -1.97
NUP98-202ENST00000355260 MT1LQ93083 61 aa2.77□□□□□ -1.97
NUP98-202ENST00000355260 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
NUP98-202ENST00000355260 LRP2P98164 4655 aa2.69□□□□□ -1.98
NUP98-202ENST00000355260 KIAA1109Q2LD37 5005 aa2.68□□□□□ -1.98
NUP98-202ENST00000355260 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
NUP98-202ENST00000355260 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
NUP98-202ENST00000355260 HERC2O95714 4834 aa2.66□□□□□ -1.98
NUP98-202ENST00000355260 LCE2BO14633 110 aa2.64□□□□□ -1.99
NUP98-202ENST00000355260 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
NUP98-202ENST00000355260 KRTAP2-4Q9BYR9 128 aa2.64□□□□□ -1.99
NUP98-202ENST00000355260 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
NUP98-202ENST00000355260 KMT2CQ8NEZ4 4911 aaKnown RBP2.63□□□□□ -1.99
NUP98-202ENST00000355260 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
NUP98-202ENST00000355260 PCLOQ9Y6V0 5065 aa2.58□□□□□ -2
NUP98-202ENST00000355260 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
NUP98-202ENST00000355260 KRTAP4-8A0A0G2JLE6 195 aa2.57□□□□□ -2
NUP98-202ENST00000355260 LCE2AQ5TA79 106 aaPredicted RBP2.57□□□□□ -2
NUP98-202ENST00000355260 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
NUP98-202ENST00000355260 MT1MQ8N339 61 aa2.57□□□□□ -2
NUP98-202ENST00000355260 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
NUP98-202ENST00000355260 SPRR2EP22531 72 aa2.56□□□□□ -2
NUP98-202ENST00000355260 SPRR2BP35325 72 aa2.56□□□□□ -2
NUP98-202ENST00000355260 SPRR2AP35326 72 aa2.56□□□□□ -2
NUP98-202ENST00000355260 LPAP08519 4548 aa2.55□□□□□ -2
NUP98-202ENST00000355260 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
NUP98-202ENST00000355260 LCE3BQ5TA77 95 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms