RNA–Protein interactions for RNA: ENST00000355260.7

NUP98-202, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 5,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-202ENST00000355260 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
NUP98-202ENST00000355260 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
NUP98-202ENST00000355260 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.32
NUP98-202ENST00000355260 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
NUP98-202ENST00000355260 CCDC180Q9P1Z9 1646 aa12.86□□□□□ -0.35
NUP98-202ENST00000355260 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
NUP98-202ENST00000355260 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
NUP98-202ENST00000355260 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
NUP98-202ENST00000355260 APLP2Q06481 763 aa12.45□□□□□ -0.42
NUP98-202ENST00000355260 TRIM41Q8WV44 630 aa12.45□□□□□ -0.42
NUP98-202ENST00000355260 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
NUP98-202ENST00000355260 TRIM26Q12899 539 aaPredicted RBP12.4□□□□□ -0.42
NUP98-202ENST00000355260 MYT1Q01538 1121 aa12.37□□□□□ -0.43
NUP98-202ENST00000355260 PCGF6Q9BYE7 350 aa12.37□□□□□ -0.43
NUP98-202ENST00000355260 HRCP23327 699 aa12.37□□□□□ -0.43
NUP98-202ENST00000355260 CHIC1Q5VXU3 224 aa12.36□□□□□ -0.43
NUP98-202ENST00000355260 CENPBP07199 599 aaPredicted RBP12.34□□□□□ -0.43
NUP98-202ENST00000355260 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
NUP98-202ENST00000355260 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
NUP98-202ENST00000355260 MYO15BQ96JP2 1530 aa12.09□□□□□ -0.47
NUP98-202ENST00000355260 NACADO15069 1562 aa12.08□□□□□ -0.48
NUP98-202ENST00000355260 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
NUP98-202ENST00000355260 RB1CC1Q8TDY2 1594 aa11.97□□□□□ -0.49
NUP98-202ENST00000355260 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
NUP98-202ENST00000355260 EEA1Q15075 1411 aa11.94□□□□□ -0.5
NUP98-202ENST00000355260 ABCC9O60706 1549 aa11.93□□□□□ -0.5
NUP98-202ENST00000355260 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
NUP98-202ENST00000355260 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
NUP98-202ENST00000355260 LOC105371045A0A1W2PR82 267 aa11.83□□□□□ -0.52
NUP98-202ENST00000355260 NEFLP07196 543 aa11.81□□□□□ -0.52
NUP98-202ENST00000355260 RSF1Q96T23 1441 aaPredicted RBP11.79□□□□□ -0.52
NUP98-202ENST00000355260 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
NUP98-202ENST00000355260 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
NUP98-202ENST00000355260 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
NUP98-202ENST00000355260 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
NUP98-202ENST00000355260 ACIN1Q9UKV3 1341 aaKnown RBP11.66□□□□□ -0.54
NUP98-202ENST00000355260 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
NUP98-202ENST00000355260 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
NUP98-202ENST00000355260 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
NUP98-202ENST00000355260 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
NUP98-202ENST00000355260 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
NUP98-202ENST00000355260 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
NUP98-202ENST00000355260 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
NUP98-202ENST00000355260 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
NUP98-202ENST00000355260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.52□□□□□ -0.57
NUP98-202ENST00000355260 RANGAP1P46060 587 aaPredicted RBP11.51□□□□□ -0.57
NUP98-202ENST00000355260 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
NUP98-202ENST00000355260 SMARCA2P51531 1590 aa11.49□□□□□ -0.57
NUP98-202ENST00000355260 WRNQ14191 1432 aaPredicted RBP eCLIP11.49□□□□□ -0.57
NUP98-202ENST00000355260 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
NUP98-202ENST00000355260 BAZ1BQ9UIG0 1483 aaKnown RBP11.47□□□□□ -0.57
NUP98-202ENST00000355260 YTHDC1Q96MU7 727 aaKnown RBP11.47□□□□□ -0.57
NUP98-202ENST00000355260 CLIP1P30622 1438 aa11.47□□□□□ -0.57
NUP98-202ENST00000355260 MROH2BQ7Z745 1585 aa11.4□□□□□ -0.58
NUP98-202ENST00000355260 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
NUP98-202ENST00000355260 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
NUP98-202ENST00000355260 ANP32CO43423 234 aa11.38□□□□□ -0.59
NUP98-202ENST00000355260 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
NUP98-202ENST00000355260 CECR2Q9BXF3 1484 aa11.34□□□□□ -0.59
NUP98-202ENST00000355260 FAM50AQ14320 339 aaKnown RBP11.33□□□□□ -0.6
NUP98-202ENST00000355260 GTF3C3Q9Y5Q9 886 aa11.33□□□□□ -0.6
NUP98-202ENST00000355260 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
NUP98-202ENST00000355260 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
NUP98-202ENST00000355260 FHAD1B1AJZ9 1412 aa11.31□□□□□ -0.6
NUP98-202ENST00000355260 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
NUP98-202ENST00000355260 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
NUP98-202ENST00000355260 CDK11AQ9UQ88 783 aaPredicted RBP11.3□□□□□ -0.6
NUP98-202ENST00000355260 WIZO95785 1651 aa11.3□□□□□ -0.6
NUP98-202ENST00000355260 ITGAEP38570 1179 aa11.29□□□□□ -0.6
NUP98-202ENST00000355260 TONSLQ96HA7 1378 aa11.25□□□□□ -0.61
NUP98-202ENST00000355260 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
NUP98-202ENST00000355260 KIF21BO75037 1637 aa11.21□□□□□ -0.61
NUP98-202ENST00000355260 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
NUP98-202ENST00000355260 RTL5Q5HYW3 569 aaPredicted RBP11.15□□□□□ -0.62
NUP98-202ENST00000355260 MTUS2Q5JR59 1369 aa11.14□□□□□ -0.63
NUP98-202ENST00000355260 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
NUP98-202ENST00000355260 CCNB3Q8WWL7 1395 aa11.13□□□□□ -0.63
NUP98-202ENST00000355260 ABCC8Q09428 1581 aa11.13□□□□□ -0.63
NUP98-202ENST00000355260 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
NUP98-202ENST00000355260 ATAD2BQ9ULI0 1458 aa11.12□□□□□ -0.63
NUP98-202ENST00000355260 SOGA1O94964 1423 aa11.12□□□□□ -0.63
NUP98-202ENST00000355260 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
NUP98-202ENST00000355260 ARHGAP35Q9NRY4 1499 aa11.08□□□□□ -0.64
NUP98-202ENST00000355260 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
NUP98-202ENST00000355260 SETD5Q9C0A6 1442 aa11.06□□□□□ -0.64
NUP98-202ENST00000355260 CARMIL1Q5VZK9 1371 aa11.05□□□□□ -0.64
NUP98-202ENST00000355260 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
NUP98-202ENST00000355260 CCER2I3L3R5 266 aa11.04□□□□□ -0.64
NUP98-202ENST00000355260 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
NUP98-202ENST00000355260 CUX2O14529 1486 aa11.04□□□□□ -0.64
NUP98-202ENST00000355260 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
NUP98-202ENST00000355260 PEG3Q9GZU2 1588 aa11.02□□□□□ -0.64
NUP98-202ENST00000355260 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
NUP98-202ENST00000355260 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
NUP98-202ENST00000355260 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
NUP98-202ENST00000355260 POLR3GLQ9BT43 218 aa10.98□□□□□ -0.65
NUP98-202ENST00000355260 CUX1P39880 1505 aa10.98□□□□□ -0.65
NUP98-202ENST00000355260 MIER1Q8N108 512 aa10.98□□□□□ -0.65
NUP98-202ENST00000355260 TOP2BQ02880 1626 aa10.98□□□□□ -0.65
NUP98-202ENST00000355260 PDS5BQ9NTI5 1447 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms