RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
CDH23-202ENST00000299366 KRTAP13-4Q3LI77 160 aa7.38□□□□□ -1.23
CDH23-202ENST00000299366 DNAH2Q9P225 4427 aa7.37□□□□□ -1.23
CDH23-202ENST00000299366 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
CDH23-202ENST00000299366 VPS13DQ5THJ4 4388 aa7.36□□□□□ -1.23
CDH23-202ENST00000299366 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.23
CDH23-202ENST00000299366 DNAH3Q8TD57 4116 aa7.32□□□□□ -1.24
CDH23-202ENST00000299366 ALMS1Q8TCU4 4167 aa7.32□□□□□ -1.24
CDH23-202ENST00000299366 TNP1P09430 55 aa7.3□□□□□ -1.24
CDH23-202ENST00000299366 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
CDH23-202ENST00000299366 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
CDH23-202ENST00000299366 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
CDH23-202ENST00000299366 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
CDH23-202ENST00000299366 VPS13BQ7Z7G8 4022 aa7.2□□□□□ -1.26
CDH23-202ENST00000299366 KRTAP10-10P60014 251 aa7.15□□□□□ -1.27
CDH23-202ENST00000299366 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
CDH23-202ENST00000299366 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
CDH23-202ENST00000299366 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
CDH23-202ENST00000299366 DYNC1H1Q14204 4646 aaKnown RBP7.1□□□□□ -1.27
CDH23-202ENST00000299366 HYDINQ4G0P3 5121 aa7.09□□□□□ -1.27
CDH23-202ENST00000299366 KIAA1109Q2LD37 5005 aa7.09□□□□□ -1.27
CDH23-202ENST00000299366 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
CDH23-202ENST00000299366 DYNC2H1Q8NCM8 4307 aaKnown RBP7.05□□□□□ -1.28
CDH23-202ENST00000299366 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
CDH23-202ENST00000299366 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
CDH23-202ENST00000299366 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
CDH23-202ENST00000299366 RYR1P21817 5038 aa7.03□□□□□ -1.28
CDH23-202ENST00000299366 PKHD1P08F94 4074 aa6.99□□□□□ -1.29
CDH23-202ENST00000299366 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
CDH23-202ENST00000299366 PP632Q6XCG6 107 aa6.97□□□□□ -1.29
CDH23-202ENST00000299366 SACSQ9NZJ4 4579 aa6.94□□□□□ -1.3
CDH23-202ENST00000299366 APOBP04114 4563 aaKnown RBP6.88□□□□□ -1.31
CDH23-202ENST00000299366 RYR3Q15413 4870 aa6.85□□□□□ -1.31
CDH23-202ENST00000299366 FAT2Q9NYQ8 4349 aa6.85□□□□□ -1.31
CDH23-202ENST00000299366 KMT2CQ8NEZ4 4911 aaKnown RBP6.83□□□□□ -1.32
CDH23-202ENST00000299366 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
CDH23-202ENST00000299366 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
CDH23-202ENST00000299366 LRP2P98164 4655 aa6.72□□□□□ -1.33
CDH23-202ENST00000299366 PKD1P98161 4303 aa6.68□□□□□ -1.34
CDH23-202ENST00000299366 HSPG2P98160 4391 aa6.64□□□□□ -1.35
CDH23-202ENST00000299366 RYR2Q92736 4967 aa6.56□□□□□ -1.36
CDH23-202ENST00000299366 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
CDH23-202ENST00000299366 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
CDH23-202ENST00000299366 EPPK1P58107 5090 aaKnown RBP6.51□□□□□ -1.37
CDH23-202ENST00000299366 LPAP08519 4548 aa6.49□□□□□ -1.37
CDH23-202ENST00000299366 HERC2O95714 4834 aa6.42□□□□□ -1.38
CDH23-202ENST00000299366 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
CDH23-202ENST00000299366 MUC2Q02817 5179 aa6.35□□□□□ -1.39
CDH23-202ENST00000299366 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
CDH23-202ENST00000299366 ABCA13Q86UQ4 5058 aa6.26□□□□□ -1.41
CDH23-202ENST00000299366 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
CDH23-202ENST00000299366 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
CDH23-202ENST00000299366 TNXBP22105 4242 aa6.24□□□□□ -1.41
CDH23-202ENST00000299366 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
CDH23-202ENST00000299366 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
CDH23-202ENST00000299366 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
CDH23-202ENST00000299366 HERC1Q15751 4861 aa6.1□□□□□ -1.43
CDH23-202ENST00000299366 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.43
CDH23-202ENST00000299366 FSIP2Q5CZC0 6907 aa6□□□□□ -1.45
CDH23-202ENST00000299366 MT1HP80294 61 aa6□□□□□ -1.45
CDH23-202ENST00000299366 MT2AP02795 61 aa5.99□□□□□ -1.45
CDH23-202ENST00000299366 MT1FP04733 61 aa5.98□□□□□ -1.45
CDH23-202ENST00000299366 UBR4Q5T4S7 5183 aa5.94□□□□□ -1.46
CDH23-202ENST00000299366 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
CDH23-202ENST00000299366 INE1O15225 51 aa5.9□□□□□ -1.47
CDH23-202ENST00000299366 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
CDH23-202ENST00000299366 BIRC6Q9NR09 4857 aa5.83□□□□□ -1.48
CDH23-202ENST00000299366 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
CDH23-202ENST00000299366 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
CDH23-202ENST00000299366 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
CDH23-202ENST00000299366 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
CDH23-202ENST00000299366 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
CDH23-202ENST00000299366 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
CDH23-202ENST00000299366 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
CDH23-202ENST00000299366 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
CDH23-202ENST00000299366 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
CDH23-202ENST00000299366 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
CDH23-202ENST00000299366 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
CDH23-202ENST00000299366 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
CDH23-202ENST00000299366 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
CDH23-202ENST00000299366 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
CDH23-202ENST00000299366 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
CDH23-202ENST00000299366 USH2AO75445 5202 aa5.54□□□□□ -1.52
CDH23-202ENST00000299366 MT1XP80297 61 aa5.53□□□□□ -1.52
CDH23-202ENST00000299366 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
CDH23-202ENST00000299366 MT1BP07438 61 aa5.51□□□□□ -1.53
CDH23-202ENST00000299366 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
CDH23-202ENST00000299366 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
CDH23-202ENST00000299366 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
CDH23-202ENST00000299366 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
CDH23-202ENST00000299366 KMT2DO14686 5537 aa5.35□□□□□ -1.55
CDH23-202ENST00000299366 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
CDH23-202ENST00000299366 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
CDH23-202ENST00000299366 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
CDH23-202ENST00000299366 LCE2BO14633 110 aa5.23□□□□□ -1.57
CDH23-202ENST00000299366 MT1GP13640 62 aa5.2□□□□□ -1.58
CDH23-202ENST00000299366 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
CDH23-202ENST00000299366 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
CDH23-202ENST00000299366 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
CDH23-202ENST00000299366 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms