RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ZNF706Q9Y5V0 76 aaPredicted RBP10.71□□□□□ -0.69
SPC24-206ENST00000592540 PLECQ15149 4684 aaKnown RBP10.69□□□□□ -0.7
SPC24-206ENST00000592540 RBM12B-AS1Q9P1G2 102 aa10.68□□□□□ -0.7
SPC24-206ENST00000592540 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
SPC24-206ENST00000592540 DNAH8Q96JB1 4490 aa10.67□□□□□ -0.7
SPC24-206ENST00000592540 Q5W150 140 aa10.64□□□□□ -0.71
SPC24-206ENST00000592540 PSORS1C2Q9UIG4 136 aa10.64□□□□□ -0.71
SPC24-206ENST00000592540 FRAS1Q86XX4 4008 aa10.64□□□□□ -0.71
SPC24-206ENST00000592540 ALMS1Q8TCU4 4167 aa10.64□□□□□ -0.71
SPC24-206ENST00000592540 KRTAP13-3Q3SY46 172 aa10.63□□□□□ -0.71
SPC24-206ENST00000592540 PRR26Q8N8Z3 221 aa10.63□□□□□ -0.71
SPC24-206ENST00000592540 IGLV5-52A0A0A0MRZ9 124 aa10.63□□□□□ -0.71
SPC24-206ENST00000592540 MDFIQ99750 246 aa10.62□□□□□ -0.71
SPC24-206ENST00000592540 C7orf65Q6ZTY9 151 aa10.61□□□□□ -0.71
SPC24-206ENST00000592540 MGAM2Q2M2H8 2515 aa10.61□□□□□ -0.71
SPC24-206ENST00000592540 SPINK6Q6UWN8 80 aa10.6□□□□□ -0.71
SPC24-206ENST00000592540 ZNF861PO60384 105 aa10.59□□□□□ -0.71
SPC24-206ENST00000592540 HECTD4Q9Y4D8 3996 aa10.59□□□□□ -0.71
SPC24-206ENST00000592540 ACYP2P14621 99 aa10.56□□□□□ -0.72
SPC24-206ENST00000592540 A0A087WTM6 91 aa10.55□□□□□ -0.72
SPC24-206ENST00000592540 VPS13DQ5THJ4 4388 aa10.52□□□□□ -0.73
SPC24-206ENST00000592540 RTL8CO15255 209 aa10.51□□□□□ -0.73
SPC24-206ENST00000592540 NUPR2A6NF83 97 aa10.49□□□□□ -0.73
SPC24-206ENST00000592540 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
SPC24-206ENST00000592540 DMAC1Q96GE9 116 aa10.48□□□□□ -0.73
SPC24-206ENST00000592540 DNAH17Q9UFH2 4485 aa10.48□□□□□ -0.73
SPC24-206ENST00000592540 C8orf87E5RJ46 101 aa10.47□□□□□ -0.73
SPC24-206ENST00000592540 STARD9Q9P2P6 4700 aa10.44□□□□□ -0.74
SPC24-206ENST00000592540 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
SPC24-206ENST00000592540 DNAH2Q9P225 4427 aa10.41□□□□□ -0.74
SPC24-206ENST00000592540 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
SPC24-206ENST00000592540 LINC00313P59037 77 aa10.39□□□□□ -0.75
SPC24-206ENST00000592540 A0A1B0GU69 56 aa10.38□□□□□ -0.75
SPC24-206ENST00000592540 SSBP3-AS1Q7Z2R9 100 aa10.38□□□□□ -0.75
SPC24-206ENST00000592540 RETNLBQ9BQ08 111 aa10.38□□□□□ -0.75
SPC24-206ENST00000592540 PRKDCP78527 4128 aaKnown RBP10.37□□□□□ -0.75
SPC24-206ENST00000592540 IGKV2-30P06310 120 aa10.36□□□□□ -0.75
SPC24-206ENST00000592540 KMT2AQ03164 3969 aa10.36□□□□□ -0.75
SPC24-206ENST00000592540 FBN3Q75N90 2809 aa10.34□□□□□ -0.75
SPC24-206ENST00000592540 SPATA8Q6RVD6 105 aa10.33□□□□□ -0.76
SPC24-206ENST00000592540 PRAC1Q96KF2 57 aa10.31□□□□□ -0.76
SPC24-206ENST00000592540 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
SPC24-206ENST00000592540 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.77
SPC24-206ENST00000592540 MEGF8Q7Z7M0 2845 aa10.26□□□□□ -0.77
SPC24-206ENST00000592540 DNAH11Q96DT5 4516 aa10.26□□□□□ -0.77
SPC24-206ENST00000592540 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
SPC24-206ENST00000592540 MIR22HGQ0VDD5 57 aa10.24□□□□□ -0.77
SPC24-206ENST00000592540 UQCR11O14957 56 aa10.24□□□□□ -0.77
SPC24-206ENST00000592540 DNAH6Q9C0G6 4158 aa10.22□□□□□ -0.77
SPC24-206ENST00000592540 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
SPC24-206ENST00000592540 TGP01266 2768 aa10.2□□□□□ -0.78
SPC24-206ENST00000592540 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
SPC24-206ENST00000592540 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
SPC24-206ENST00000592540 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
SPC24-206ENST00000592540 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
SPC24-206ENST00000592540 KRTAP10-2P60368 255 aa10.07□□□□□ -0.8
SPC24-206ENST00000592540 LRP1BQ9NZR2 4599 aa10.05□□□□□ -0.8
SPC24-206ENST00000592540 KRTAP1-4P0C5Y4 121 aa10.03□□□□□ -0.8
SPC24-206ENST00000592540 SPINK1P00995 79 aa10.01□□□□□ -0.81
SPC24-206ENST00000592540 LY6G6CO95867 125 aa10□□□□□ -0.81
SPC24-206ENST00000592540 Q8N1X5 172 aa9.98□□□□□ -0.81
SPC24-206ENST00000592540 CSAG1Q6PB30 78 aa9.97□□□□□ -0.81
SPC24-206ENST00000592540 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.81
SPC24-206ENST00000592540 Q6ZSA8 131 aa9.96□□□□□ -0.81
SPC24-206ENST00000592540 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
SPC24-206ENST00000592540 KRTAP10-1P60331 282 aa9.95□□□□□ -0.82
SPC24-206ENST00000592540 PKD1P98161 4303 aa9.95□□□□□ -0.82
SPC24-206ENST00000592540 TYMSOSQ8TAI1 123 aa9.91□□□□□ -0.82
SPC24-206ENST00000592540 FAT2Q9NYQ8 4349 aa9.84□□□□□ -0.83
SPC24-206ENST00000592540 H0YAA0 97 aa9.84□□□□□ -0.83
SPC24-206ENST00000592540 A8MUU9 505 aa9.8□□□□□ -0.84
SPC24-206ENST00000592540 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
SPC24-206ENST00000592540 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
SPC24-206ENST00000592540 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
SPC24-206ENST00000592540 A0A1B0GU33 70 aa9.73□□□□□ -0.85
SPC24-206ENST00000592540 KRTAP3-1Q9BYR8 98 aa9.73□□□□□ -0.85
SPC24-206ENST00000592540 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
SPC24-206ENST00000592540 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
SPC24-206ENST00000592540 C20orf166-AS1Q96NR2 134 aa9.68□□□□□ -0.86
SPC24-206ENST00000592540 C9orf92A6NGG3 77 aa9.68□□□□□ -0.86
SPC24-206ENST00000592540 KRTAP25-1Q3LHN0 102 aa9.66□□□□□ -0.86
SPC24-206ENST00000592540 H3BS24 57 aa9.59□□□□□ -0.87
SPC24-206ENST00000592540 PKHD1L1Q86WI1 4243 aa9.57□□□□□ -0.88
SPC24-206ENST00000592540 DNHD1Q96M86 4753 aa9.57□□□□□ -0.88
SPC24-206ENST00000592540 PKHD1P08F94 4074 aa9.57□□□□□ -0.88
SPC24-206ENST00000592540 COX6B2Q6YFQ2 88 aa9.51□□□□□ -0.89
SPC24-206ENST00000592540 K7ERS5 55 aa9.49□□□□□ -0.89
SPC24-206ENST00000592540 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
SPC24-206ENST00000592540 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
SPC24-206ENST00000592540 ROMO1P60602 79 aa9.47□□□□□ -0.89
SPC24-206ENST00000592540 APOBP04114 4563 aaKnown RBP9.45□□□□□ -0.9
SPC24-206ENST00000592540 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
SPC24-206ENST00000592540 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
SPC24-206ENST00000592540 FAT1Q14517 4588 aa9.4□□□□□ -0.91
SPC24-206ENST00000592540 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
SPC24-206ENST00000592540 KRTAP21-3Q3LHN1 58 aa9.34□□□□□ -0.91
SPC24-206ENST00000592540 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
SPC24-206ENST00000592540 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
SPC24-206ENST00000592540 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
SPC24-206ENST00000592540 KRTAP13-4Q3LI77 160 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms