RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 FREM2Q5SZK8 3169 aa2.02□□□□□ -2.09
GPHN-210ENST00000555668 PRRC2CQ9Y520 2896 aaKnown RBP2.01□□□□□ -2.09
GPHN-210ENST00000555668 HTTP42858 3142 aa2.01□□□□□ -2.09
GPHN-210ENST00000555668 CHD9Q3L8U1 2897 aa2□□□□□ -2.09
GPHN-210ENST00000555668 WDFY3Q8IZQ1 3526 aa2□□□□□ -2.09
GPHN-210ENST00000555668 A0A0D9SG42 100 aa2□□□□□ -2.09
GPHN-210ENST00000555668 DEFB4AO15263 64 aa2□□□□□ -2.09
GPHN-210ENST00000555668 LAMA3Q16787 3333 aa2□□□□□ -2.09
GPHN-210ENST00000555668 OTOGLQ3ZCN5 2332 aa2□□□□□ -2.09
GPHN-210ENST00000555668 NOTCH2Q04721 2471 aa1.99□□□□□ -2.09
GPHN-210ENST00000555668 AKAP9Q99996 3911 aa1.99□□□□□ -2.09
GPHN-210ENST00000555668 DMXL1Q9Y485 3027 aa1.99□□□□□ -2.09
GPHN-210ENST00000555668 MUC6Q6W4X9 2439 aa1.99□□□□□ -2.09
GPHN-210ENST00000555668 COL12A1Q99715 3063 aa1.99□□□□□ -2.09
GPHN-210ENST00000555668 CSMD1Q96PZ7 3565 aa1.98□□□□□ -2.09
GPHN-210ENST00000555668 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
GPHN-210ENST00000555668 FN1P02751 2386 aaKnown RBP1.98□□□□□ -2.09
GPHN-210ENST00000555668 SPENQ96T58 3664 aaKnown RBP1.97□□□□□ -2.09
GPHN-210ENST00000555668 ATMQ13315 3056 aa1.97□□□□□ -2.09
GPHN-210ENST00000555668 SPTAN1Q13813 2472 aaKnown RBP1.97□□□□□ -2.09
GPHN-210ENST00000555668 CCDC168Q8NDH2 2452 aa1.97□□□□□ -2.09
GPHN-210ENST00000555668 APCP25054 2843 aa1.97□□□□□ -2.09
GPHN-210ENST00000555668 CREBBPQ92793 2442 aa1.97□□□□□ -2.09
GPHN-210ENST00000555668 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
GPHN-210ENST00000555668 KRTAP12-1P59990 96 aa1.97□□□□□ -2.09
GPHN-210ENST00000555668 BRCA2P51587 3418 aa1.95□□□□□ -2.1
GPHN-210ENST00000555668 VWFP04275 2813 aa1.95□□□□□ -2.1
GPHN-210ENST00000555668 LOC400499M0QZD8 3231 aa1.95□□□□□ -2.1
GPHN-210ENST00000555668 PTPN13Q12923 2485 aa1.95□□□□□ -2.1
GPHN-210ENST00000555668 CELSR1Q9NYQ6 3014 aa1.95□□□□□ -2.1
GPHN-210ENST00000555668 TLN1Q9Y490 2541 aaKnown RBP1.95□□□□□ -2.1
GPHN-210ENST00000555668 F8P00451 2351 aa1.95□□□□□ -2.1
GPHN-210ENST00000555668 FAM208BQ5VWN6 2430 aa1.95□□□□□ -2.1
GPHN-210ENST00000555668 COL6A5A8TX70 2615 aa1.94□□□□□ -2.1
GPHN-210ENST00000555668 HRNRQ86YZ3 2850 aaPredicted RBP1.94□□□□□ -2.1
GPHN-210ENST00000555668 M0QZ58 72 aa1.94□□□□□ -2.1
GPHN-210ENST00000555668 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
GPHN-210ENST00000555668 VCANP13611 3396 aa1.94□□□□□ -2.1
GPHN-210ENST00000555668 CRYBG3Q68DQ2 2970 aa1.94□□□□□ -2.1
GPHN-210ENST00000555668 DCHS2Q6V1P9 2916 aa1.94□□□□□ -2.1
GPHN-210ENST00000555668 ZNF462Q96JM2 2506 aa1.93□□□□□ -2.1
GPHN-210ENST00000555668 NAV2Q8IVL1 2488 aa1.93□□□□□ -2.1
GPHN-210ENST00000555668 TEX15Q9BXT5 2789 aa1.93□□□□□ -2.1
GPHN-210ENST00000555668 CDH23Q9H251 3354 aa1.92□□□□□ -2.1
GPHN-210ENST00000555668 TLN2Q9Y4G6 2542 aa1.92□□□□□ -2.1
GPHN-210ENST00000555668 MEGF8Q7Z7M0 2845 aa1.92□□□□□ -2.1
GPHN-210ENST00000555668 ATRXP46100 2492 aa1.92□□□□□ -2.1
GPHN-210ENST00000555668 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
GPHN-210ENST00000555668 HIVEP3Q5T1R4 2406 aa1.91□□□□□ -2.1
GPHN-210ENST00000555668 SETXQ7Z333 2677 aaKnown RBP1.91□□□□□ -2.1
GPHN-210ENST00000555668 CEP290O15078 2479 aa1.91□□□□□ -2.1
GPHN-210ENST00000555668 RIF1Q5UIP0 2472 aaKnown RBP1.91□□□□□ -2.1
GPHN-210ENST00000555668 NF1P21359 2839 aa1.91□□□□□ -2.1
GPHN-210ENST00000555668 NBPF19A0A087WUL8 3843 aa1.91□□□□□ -2.1
GPHN-210ENST00000555668 CELSR3Q9NYQ7 3312 aa1.9□□□□□ -2.1
GPHN-210ENST00000555668 Q5VSD8 79 aa1.9□□□□□ -2.11
GPHN-210ENST00000555668 UTP20O75691 2785 aaKnown RBP1.9□□□□□ -2.11
GPHN-210ENST00000555668 LAMA5O15230 3695 aa1.89□□□□□ -2.11
GPHN-210ENST00000555668 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
GPHN-210ENST00000555668 BAHCC1Q9P281 2608 aa1.89□□□□□ -2.11
GPHN-210ENST00000555668 SRRM2Q9UQ35 2752 aaKnown RBP1.89□□□□□ -2.11
GPHN-210ENST00000555668 SMG1Q96Q15 3661 aaKnown RBP1.89□□□□□ -2.11
GPHN-210ENST00000555668 USP9XQ93008 2570 aaPredicted RBP1.89□□□□□ -2.11
GPHN-210ENST00000555668 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
GPHN-210ENST00000555668 SONP18583 2426 aaKnown RBP1.88□□□□□ -2.11
GPHN-210ENST00000555668 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
GPHN-210ENST00000555668 DOPEY1Q5JWR5 2465 aa1.88□□□□□ -2.11
GPHN-210ENST00000555668 JMJD1CQ15652 2540 aa1.86□□□□□ -2.11
GPHN-210ENST00000555668 CENPEQ02224 2701 aa1.86□□□□□ -2.11
GPHN-210ENST00000555668 KRTAP10-1P60331 282 aa1.85□□□□□ -2.11
GPHN-210ENST00000555668 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
GPHN-210ENST00000555668 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
GPHN-210ENST00000555668 ADGRG4Q8IZF6 3080 aa1.83□□□□□ -2.12
GPHN-210ENST00000555668 RELNP78509 3460 aa1.83□□□□□ -2.12
GPHN-210ENST00000555668 GCN1Q92616 2671 aaKnown RBP1.83□□□□□ -2.12
GPHN-210ENST00000555668 MYO15AQ9UKN7 3530 aa1.82□□□□□ -2.12
GPHN-210ENST00000555668 BSNQ9UPA5 3926 aa1.82□□□□□ -2.12
GPHN-210ENST00000555668 KRTAP13-2Q52LG2 175 aa1.82□□□□□ -2.12
GPHN-210ENST00000555668 TTC28Q96AY4 2481 aa1.81□□□□□ -2.12
GPHN-210ENST00000555668 TENM4Q6N022 2769 aa1.81□□□□□ -2.12
GPHN-210ENST00000555668 FRAS1Q86XX4 4008 aa1.81□□□□□ -2.12
GPHN-210ENST00000555668 MTORP42345 2549 aa1.81□□□□□ -2.12
GPHN-210ENST00000555668 CEP295Q9C0D2 2601 aa1.81□□□□□ -2.12
GPHN-210ENST00000555668 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
GPHN-210ENST00000555668 DNAH1Q9P2D7 4330 aa1.8□□□□□ -2.12
GPHN-210ENST00000555668 ZFYVE26Q68DK2 2539 aa1.8□□□□□ -2.12
GPHN-210ENST00000555668 PIEZO1Q92508 2521 aa1.8□□□□□ -2.12
GPHN-210ENST00000555668 CHD8Q9HCK8 2581 aa1.8□□□□□ -2.12
GPHN-210ENST00000555668 ASPMQ8IZT6 3477 aa1.79□□□□□ -2.12
GPHN-210ENST00000555668 HECTD1Q9ULT8 2610 aa1.79□□□□□ -2.12
GPHN-210ENST00000555668 UNC79Q9P2D8 2635 aa1.79□□□□□ -2.12
GPHN-210ENST00000555668 TRRAPQ9Y4A5 3859 aa1.78□□□□□ -2.12
GPHN-210ENST00000555668 TGP01266 2768 aa1.78□□□□□ -2.12
GPHN-210ENST00000555668 PKD1L2Q7Z442 2459 aa1.78□□□□□ -2.12
GPHN-210ENST00000555668 NBEAL2Q6ZNJ1 2754 aa1.77□□□□□ -2.13
GPHN-210ENST00000555668 ITPR3Q14573 2671 aa1.77□□□□□ -2.13
GPHN-210ENST00000555668 SETD2Q9BYW2 2564 aaPredicted RBP1.77□□□□□ -2.13
GPHN-210ENST00000555668 HELZ2Q9BYK8 2649 aaKnown RBP1.77□□□□□ -2.13
GPHN-210ENST00000555668 MYO9AB2RTY4 2548 aa1.77□□□□□ -2.13
GPHN-210ENST00000555668 LRRK2Q5S007 2527 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms