RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
PTPN13-209ENST00000511467 BOD1L1Q8NFC6 3051 aa2.88□□□□□ -1.95
PTPN13-209ENST00000511467 ATMQ13315 3056 aa2.88□□□□□ -1.95
PTPN13-209ENST00000511467 M0R2T5 61 aa2.86□□□□□ -1.95
PTPN13-209ENST00000511467 DMXL1Q9Y485 3027 aa2.86□□□□□ -1.95
PTPN13-209ENST00000511467 Q8N1X5 172 aa2.85□□□□□ -1.95
PTPN13-209ENST00000511467 LAMA3Q16787 3333 aa2.85□□□□□ -1.95
PTPN13-209ENST00000511467 COL7A1Q02388 2944 aa2.85□□□□□ -1.95
PTPN13-209ENST00000511467 Q5VV11 94 aa2.85□□□□□ -1.95
PTPN13-209ENST00000511467 TNP1P09430 55 aa2.84□□□□□ -1.96
PTPN13-209ENST00000511467 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
PTPN13-209ENST00000511467 XIRP2A4UGR9 3374 aa2.83□□□□□ -1.96
PTPN13-209ENST00000511467 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
PTPN13-209ENST00000511467 KRTAP10-1P60331 282 aa2.82□□□□□ -1.96
PTPN13-209ENST00000511467 KRTAP1-5Q9BYS1 174 aa2.82□□□□□ -1.96
PTPN13-209ENST00000511467 FREM2Q5SZK8 3169 aa2.81□□□□□ -1.96
PTPN13-209ENST00000511467 H0YAA0 97 aa2.81□□□□□ -1.96
PTPN13-209ENST00000511467 AKAP9Q99996 3911 aa2.81□□□□□ -1.96
PTPN13-209ENST00000511467 SMR3BP02814 79 aaPredicted RBP2.8□□□□□ -1.96
PTPN13-209ENST00000511467 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
PTPN13-209ENST00000511467 COL6A3P12111 3177 aa2.77□□□□□ -1.97
PTPN13-209ENST00000511467 KRTAP25-1Q3LHN0 102 aa2.77□□□□□ -1.97
PTPN13-209ENST00000511467 REV3LO60673 3130 aa2.77□□□□□ -1.97
PTPN13-209ENST00000511467 NBPF19A0A087WUL8 3843 aa2.76□□□□□ -1.97
PTPN13-209ENST00000511467 Q8NDZ9 215 aa2.75□□□□□ -1.97
PTPN13-209ENST00000511467 KRTAP10-2P60368 255 aa2.74□□□□□ -1.97
PTPN13-209ENST00000511467 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
PTPN13-209ENST00000511467 A0A0D9SG42 100 aa2.73□□□□□ -1.97
PTPN13-209ENST00000511467 BRCA2P51587 3418 aa2.73□□□□□ -1.97
PTPN13-209ENST00000511467 UNC80Q8N2C7 3258 aa2.73□□□□□ -1.97
PTPN13-209ENST00000511467 SPTBN5Q9NRC6 3674 aaKnown RBP2.73□□□□□ -1.97
PTPN13-209ENST00000511467 A6NN06 94 aa2.72□□□□□ -1.97
PTPN13-209ENST00000511467 CDH23Q9H251 3354 aa2.72□□□□□ -1.97
PTPN13-209ENST00000511467 CELSR3Q9NYQ7 3312 aa2.71□□□□□ -1.98
PTPN13-209ENST00000511467 MEGF8Q7Z7M0 2845 aa2.71□□□□□ -1.98
PTPN13-209ENST00000511467 TRRAPQ9Y4A5 3859 aa2.71□□□□□ -1.98
PTPN13-209ENST00000511467 EYSQ5T1H1 3165 aa2.7□□□□□ -1.98
PTPN13-209ENST00000511467 CFAP47Q6ZTR5 3102 aa2.69□□□□□ -1.98
PTPN13-209ENST00000511467 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
PTPN13-209ENST00000511467 XP32Q5T750 250 aa2.68□□□□□ -1.98
PTPN13-209ENST00000511467 VCANP13611 3396 aa2.67□□□□□ -1.98
PTPN13-209ENST00000511467 A0A0G2JQZ4 141 aa2.66□□□□□ -1.98
PTPN13-209ENST00000511467 KRTAP23-1A1A580 65 aa2.66□□□□□ -1.98
PTPN13-209ENST00000511467 DNAH14Q0VDD8 3507 aa2.66□□□□□ -1.98
PTPN13-209ENST00000511467 OTOGQ6ZRI0 2925 aa2.66□□□□□ -1.98
PTPN13-209ENST00000511467 ZFHX3Q15911 3703 aa2.66□□□□□ -1.98
PTPN13-209ENST00000511467 SZT2Q5T011 3432 aa2.65□□□□□ -1.98
PTPN13-209ENST00000511467 KRTAP1-4P0C5Y4 121 aa2.65□□□□□ -1.98
PTPN13-209ENST00000511467 CMYA5Q8N3K9 4069 aa2.65□□□□□ -1.98
PTPN13-209ENST00000511467 LOC400499M0QZD8 3231 aa2.65□□□□□ -1.99
PTPN13-209ENST00000511467 SRRM2Q9UQ35 2752 aaKnown RBP2.65□□□□□ -1.99
PTPN13-209ENST00000511467 SPENQ96T58 3664 aaKnown RBP2.65□□□□□ -1.99
PTPN13-209ENST00000511467 SPEGQ15772 3267 aa2.65□□□□□ -1.99
PTPN13-209ENST00000511467 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
PTPN13-209ENST00000511467 FBN3Q75N90 2809 aa2.63□□□□□ -1.99
PTPN13-209ENST00000511467 KRTAP19-4Q3LI73 84 aa2.62□□□□□ -1.99
PTPN13-209ENST00000511467 KRTAP10-8P60410 259 aa2.62□□□□□ -1.99
PTPN13-209ENST00000511467 KRTAP7-1Q8IUC3 87 aa2.62□□□□□ -1.99
PTPN13-209ENST00000511467 KRTAP16-1A8MUX0 517 aa2.61□□□□□ -1.99
PTPN13-209ENST00000511467 KRTAP11-1Q8IUC1 163 aa2.61□□□□□ -1.99
PTPN13-209ENST00000511467 C10orf95Q9H7T3 257 aa2.59□□□□□ -2
PTPN13-209ENST00000511467 A0A1B0GVY2 172 aa2.58□□□□□ -2
PTPN13-209ENST00000511467 BSNQ9UPA5 3926 aa2.58□□□□□ -2
PTPN13-209ENST00000511467 DNAH6Q9C0G6 4158 aa2.58□□□□□ -2
PTPN13-209ENST00000511467 DNAH7Q8WXX0 4024 aa2.57□□□□□ -2
PTPN13-209ENST00000511467 DNAH1Q9P2D7 4330 aa2.55□□□□□ -2
PTPN13-209ENST00000511467 VPS13CQ709C8 3753 aa2.54□□□□□ -2
PTPN13-209ENST00000511467 DNAH3Q8TD57 4116 aa2.52□□□□□ -2.01
PTPN13-209ENST00000511467 ALMS1Q8TCU4 4167 aa2.52□□□□□ -2.01
PTPN13-209ENST00000511467 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
PTPN13-209ENST00000511467 P0C880 135 aa2.52□□□□□ -2.01
PTPN13-209ENST00000511467 RYR1P21817 5038 aa2.51□□□□□ -2.01
PTPN13-209ENST00000511467 DMDP11532 3685 aa2.48□□□□□ -2.01
PTPN13-209ENST00000511467 HECTD4Q9Y4D8 3996 aa2.47□□□□□ -2.01
PTPN13-209ENST00000511467 ZFHX4Q86UP3 3567 aa2.47□□□□□ -2.01
PTPN13-209ENST00000511467 ZNF469Q96JG9 3925 aaPredicted RBP2.46□□□□□ -2.02
PTPN13-209ENST00000511467 H3BS24 57 aa2.46□□□□□ -2.02
PTPN13-209ENST00000511467 WDFY3Q8IZQ1 3526 aa2.46□□□□□ -2.02
PTPN13-209ENST00000511467 MYO15AQ9UKN7 3530 aa2.45□□□□□ -2.02
PTPN13-209ENST00000511467 INE1O15225 51 aa2.45□□□□□ -2.02
PTPN13-209ENST00000511467 LAMA5O15230 3695 aa2.44□□□□□ -2.02
PTPN13-209ENST00000511467 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
PTPN13-209ENST00000511467 PRAC1Q96KF2 57 aa2.42□□□□□ -2.02
PTPN13-209ENST00000511467 DCHS1Q96JQ0 3298 aa2.42□□□□□ -2.02
PTPN13-209ENST00000511467 ANK2Q01484 3957 aa2.42□□□□□ -2.02
PTPN13-209ENST00000511467 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
PTPN13-209ENST00000511467 LYSTQ99698 3801 aa2.41□□□□□ -2.02
PTPN13-209ENST00000511467 SMG1Q96Q15 3661 aaKnown RBP2.4□□□□□ -2.03
PTPN13-209ENST00000511467 A8MU10 97 aa2.38□□□□□ -2.03
PTPN13-209ENST00000511467 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
PTPN13-209ENST00000511467 RELNP78509 3460 aa2.37□□□□□ -2.03
PTPN13-209ENST00000511467 ASPMQ8IZT6 3477 aa2.36□□□□□ -2.03
PTPN13-209ENST00000511467 HUWE1Q7Z6Z7 4374 aaKnown RBP2.35□□□□□ -2.03
PTPN13-209ENST00000511467 FRAS1Q86XX4 4008 aa2.35□□□□□ -2.03
PTPN13-209ENST00000511467 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
PTPN13-209ENST00000511467 KRTAP12-1P59990 96 aa2.34□□□□□ -2.04
PTPN13-209ENST00000511467 KMT2AQ03164 3969 aa2.3□□□□□ -2.04
PTPN13-209ENST00000511467 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
PTPN13-209ENST00000511467 MUC3AQ02505 3323 aa2.26□□□□□ -2.05
PTPN13-209ENST00000511467 MT1HL1P0DM35 61 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms