RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 COL12A1Q99715 3063 aa6.19□□□□□ -1.42
AC055713.1-201ENST00000498967 DMXL2Q8TDJ6 3036 aa6.16□□□□□ -1.42
AC055713.1-201ENST00000498967 PRUNE2Q8WUY3 3088 aa6.16□□□□□ -1.42
AC055713.1-201ENST00000498967 SRRM2Q9UQ35 2752 aaKnown RBP6.15□□□□□ -1.42
AC055713.1-201ENST00000498967 WDFY4Q6ZS81 3184 aa6.13□□□□□ -1.43
AC055713.1-201ENST00000498967 TENM4Q6N022 2769 aa6.09□□□□□ -1.43
AC055713.1-201ENST00000498967 TNRC18O15417 2968 aaPredicted RBP6.09□□□□□ -1.44
AC055713.1-201ENST00000498967 TENM2Q9NT68 2774 aa6.08□□□□□ -1.44
AC055713.1-201ENST00000498967 LAMA1P25391 3075 aa6.04□□□□□ -1.44
AC055713.1-201ENST00000498967 UNC80Q8N2C7 3258 aa6.04□□□□□ -1.44
AC055713.1-201ENST00000498967 RANBP2P49792 3224 aaKnown RBP6.02□□□□□ -1.45
AC055713.1-201ENST00000498967 VPS13AQ96RL7 3174 aa6.02□□□□□ -1.45
AC055713.1-201ENST00000498967 XIRP2A4UGR9 3374 aa5.99□□□□□ -1.45
AC055713.1-201ENST00000498967 H0YAA0 97 aa5.98□□□□□ -1.45
AC055713.1-201ENST00000498967 KRTAP13-2Q52LG2 175 aa5.95□□□□□ -1.46
AC055713.1-201ENST00000498967 PKD1L1Q8TDX9 2849 aa5.95□□□□□ -1.46
AC055713.1-201ENST00000498967 HTTP42858 3142 aa5.94□□□□□ -1.46
AC055713.1-201ENST00000498967 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
AC055713.1-201ENST00000498967 CELSR3Q9NYQ7 3312 aa5.93□□□□□ -1.46
AC055713.1-201ENST00000498967 VWFP04275 2813 aa5.93□□□□□ -1.46
AC055713.1-201ENST00000498967 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
AC055713.1-201ENST00000498967 DCHS2Q6V1P9 2916 aa5.92□□□□□ -1.46
AC055713.1-201ENST00000498967 ZANQ9Y493 2812 aa5.91□□□□□ -1.46
AC055713.1-201ENST00000498967 ATMQ13315 3056 aa5.91□□□□□ -1.46
AC055713.1-201ENST00000498967 ZZEF1O43149 2961 aa5.89□□□□□ -1.47
AC055713.1-201ENST00000498967 INE1O15225 51 aa5.88□□□□□ -1.47
AC055713.1-201ENST00000498967 KRTAP7-1Q8IUC3 87 aa5.88□□□□□ -1.47
AC055713.1-201ENST00000498967 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
AC055713.1-201ENST00000498967 CELSR1Q9NYQ6 3014 aa5.86□□□□□ -1.47
AC055713.1-201ENST00000498967 KRTAP21-3Q3LHN1 58 aa5.85□□□□□ -1.47
AC055713.1-201ENST00000498967 NBEAQ8NFP9 2946 aa5.84□□□□□ -1.47
AC055713.1-201ENST00000498967 ADGRG4Q8IZF6 3080 aa5.83□□□□□ -1.48
AC055713.1-201ENST00000498967 TACC2O95359 2948 aa5.83□□□□□ -1.48
AC055713.1-201ENST00000498967 XP32Q5T750 250 aa5.83□□□□□ -1.48
AC055713.1-201ENST00000498967 A0A1B0GVY2 172 aa5.82□□□□□ -1.48
AC055713.1-201ENST00000498967 MKI67P46013 3256 aaKnown RBP5.8□□□□□ -1.48
AC055713.1-201ENST00000498967 LAMA3Q16787 3333 aa5.79□□□□□ -1.48
AC055713.1-201ENST00000498967 KRTAP12-2P59991 146 aa5.77□□□□□ -1.48
AC055713.1-201ENST00000498967 COL7A1Q02388 2944 aa5.77□□□□□ -1.49
AC055713.1-201ENST00000498967 DNAH14Q0VDD8 3507 aa5.77□□□□□ -1.49
AC055713.1-201ENST00000498967 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
AC055713.1-201ENST00000498967 BOD1L1Q8NFC6 3051 aa5.76□□□□□ -1.49
AC055713.1-201ENST00000498967 DMXL1Q9Y485 3027 aa5.75□□□□□ -1.49
AC055713.1-201ENST00000498967 BRCA2P51587 3418 aa5.7□□□□□ -1.5
AC055713.1-201ENST00000498967 VCANP13611 3396 aa5.66□□□□□ -1.5
AC055713.1-201ENST00000498967 COL6A3P12111 3177 aa5.66□□□□□ -1.5
AC055713.1-201ENST00000498967 CFAP47Q6ZTR5 3102 aa5.65□□□□□ -1.51
AC055713.1-201ENST00000498967 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.51
AC055713.1-201ENST00000498967 SZT2Q5T011 3432 aa5.62□□□□□ -1.51
AC055713.1-201ENST00000498967 MXRA5Q9NR99 2828 aa5.62□□□□□ -1.51
AC055713.1-201ENST00000498967 SPEGQ15772 3267 aa5.61□□□□□ -1.51
AC055713.1-201ENST00000498967 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.51
AC055713.1-201ENST00000498967 ZFHX4Q86UP3 3567 aa5.56□□□□□ -1.52
AC055713.1-201ENST00000498967 FBN2P35556 2912 aa5.54□□□□□ -1.52
AC055713.1-201ENST00000498967 KRTAP13-3Q3SY46 172 aa5.54□□□□□ -1.52
AC055713.1-201ENST00000498967 USP34Q70CQ2 3546 aa5.53□□□□□ -1.52
AC055713.1-201ENST00000498967 MEGF8Q7Z7M0 2845 aa5.49□□□□□ -1.53
AC055713.1-201ENST00000498967 FBN3Q75N90 2809 aa5.47□□□□□ -1.53
AC055713.1-201ENST00000498967 OTOGQ6ZRI0 2925 aa5.46□□□□□ -1.53
AC055713.1-201ENST00000498967 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
AC055713.1-201ENST00000498967 CDH23Q9H251 3354 aa5.41□□□□□ -1.54
AC055713.1-201ENST00000498967 HRNRQ86YZ3 2850 aaPredicted RBP5.39□□□□□ -1.55
AC055713.1-201ENST00000498967 EYSQ5T1H1 3165 aa5.38□□□□□ -1.55
AC055713.1-201ENST00000498967 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
AC055713.1-201ENST00000498967 NBPF19A0A087WUL8 3843 aa5.22□□□□□ -1.57
AC055713.1-201ENST00000498967 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
AC055713.1-201ENST00000498967 LOC400499M0QZD8 3231 aa5.21□□□□□ -1.58
AC055713.1-201ENST00000498967 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
AC055713.1-201ENST00000498967 ASPMQ8IZT6 3477 aa5.15□□□□□ -1.59
AC055713.1-201ENST00000498967 MYO15AQ9UKN7 3530 aa5.14□□□□□ -1.59
AC055713.1-201ENST00000498967 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
AC055713.1-201ENST00000498967 SPTBN5Q9NRC6 3674 aaKnown RBP5.11□□□□□ -1.59
AC055713.1-201ENST00000498967 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
AC055713.1-201ENST00000498967 ZFHX3Q15911 3703 aa5.06□□□□□ -1.6
AC055713.1-201ENST00000498967 WDFY3Q8IZQ1 3526 aa5.04□□□□□ -1.6
AC055713.1-201ENST00000498967 FBN1P35555 2871 aaKnown RBP5.03□□□□□ -1.6
AC055713.1-201ENST00000498967 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
AC055713.1-201ENST00000498967 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
AC055713.1-201ENST00000498967 DCHS1Q96JQ0 3298 aa4.96□□□□□ -1.62
AC055713.1-201ENST00000498967 LAMA5O15230 3695 aa4.95□□□□□ -1.62
AC055713.1-201ENST00000498967 SPENQ96T58 3664 aaKnown RBP4.91□□□□□ -1.62
AC055713.1-201ENST00000498967 RELNP78509 3460 aa4.88□□□□□ -1.63
AC055713.1-201ENST00000498967 SMG1Q96Q15 3661 aaKnown RBP4.83□□□□□ -1.64
AC055713.1-201ENST00000498967 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
AC055713.1-201ENST00000498967 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
AC055713.1-201ENST00000498967 DMDP11532 3685 aa4.73□□□□□ -1.65
AC055713.1-201ENST00000498967 CSMD1Q96PZ7 3565 aa4.73□□□□□ -1.65
AC055713.1-201ENST00000498967 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
AC055713.1-201ENST00000498967 KRTAP3-2Q9BYR7 98 aa4.69□□□□□ -1.66
AC055713.1-201ENST00000498967 KRTAP3-3Q9BYR6 98 aa4.67□□□□□ -1.66
AC055713.1-201ENST00000498967 CUBNO60494 3623 aa4.67□□□□□ -1.66
AC055713.1-201ENST00000498967 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.66
AC055713.1-201ENST00000498967 MUC3AQ02505 3323 aa4.64□□□□□ -1.67
AC055713.1-201ENST00000498967 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
AC055713.1-201ENST00000498967 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
AC055713.1-201ENST00000498967 TRRAPQ9Y4A5 3859 aa4.57□□□□□ -1.68
AC055713.1-201ENST00000498967 CSMD3Q7Z407 3707 aa4.55□□□□□ -1.68
AC055713.1-201ENST00000498967 CSMD2Q7Z408 3487 aa4.5□□□□□ -1.69
AC055713.1-201ENST00000498967 LORP23490 312 aaPredicted RBP4.49□□□□□ -1.69
AC055713.1-201ENST00000498967 ANK3Q12955 4377 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms