RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
AC055713.1-201ENST00000498967 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
AC055713.1-201ENST00000498967 MYT1Q01538 1121 aa17.94■□□□□ 0.46
AC055713.1-201ENST00000498967 ERICH6Q7L0X2 663 aa17.84■□□□□ 0.45
AC055713.1-201ENST00000498967 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
AC055713.1-201ENST00000498967 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
AC055713.1-201ENST00000498967 FAM9AQ8IZU1 332 aaPredicted RBP17.3■□□□□ 0.36
AC055713.1-201ENST00000498967 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.35
AC055713.1-201ENST00000498967 APLP2Q06481 763 aa17.22■□□□□ 0.35
AC055713.1-201ENST00000498967 NEFLP07196 543 aa17.08■□□□□ 0.32
AC055713.1-201ENST00000498967 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
AC055713.1-201ENST00000498967 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
AC055713.1-201ENST00000498967 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.32
AC055713.1-201ENST00000498967 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
AC055713.1-201ENST00000498967 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
AC055713.1-201ENST00000498967 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
AC055713.1-201ENST00000498967 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
AC055713.1-201ENST00000498967 ZNF316A6NFI3 1004 aaPredicted RBP16.43■□□□□ 0.22
AC055713.1-201ENST00000498967 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
AC055713.1-201ENST00000498967 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
AC055713.1-201ENST00000498967 GLIPR1L2Q4G1C9 344 aa16.18■□□□□ 0.18
AC055713.1-201ENST00000498967 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
AC055713.1-201ENST00000498967 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
AC055713.1-201ENST00000498967 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
AC055713.1-201ENST00000498967 ANP32BQ92688 251 aaKnown RBP15.94■□□□□ 0.14
AC055713.1-201ENST00000498967 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
AC055713.1-201ENST00000498967 NEFMP07197 916 aa15.75■□□□□ 0.11
AC055713.1-201ENST00000498967 POLR3GLQ9BT43 218 aa15.75■□□□□ 0.11
AC055713.1-201ENST00000498967 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
AC055713.1-201ENST00000498967 RANGAP1P46060 587 aaPredicted RBP15.73■□□□□ 0.11
AC055713.1-201ENST00000498967 MYT1LQ9UL68 1186 aa15.72■□□□□ 0.11
AC055713.1-201ENST00000498967 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
AC055713.1-201ENST00000498967 EIF5BO60841 1220 aaKnown RBP15.69■□□□□ 0.1
AC055713.1-201ENST00000498967 CDK11AQ9UQ88 783 aaPredicted RBP15.66■□□□□ 0.1
AC055713.1-201ENST00000498967 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
AC055713.1-201ENST00000498967 TNNT2P45379 298 aaPredicted RBP15.59■□□□□ 0.09
AC055713.1-201ENST00000498967 ANP32AP39687 249 aaKnown RBP15.58■□□□□ 0.08
AC055713.1-201ENST00000498967 HSP90AA1P07900 732 aaKnown RBP15.5■□□□□ 0.07
AC055713.1-201ENST00000498967 CANXP27824 592 aaKnown RBP15.46■□□□□ 0.07
AC055713.1-201ENST00000498967 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
AC055713.1-201ENST00000498967 UPF2Q9HAU5 1272 aaKnown RBP15.44■□□□□ 0.06
AC055713.1-201ENST00000498967 HRCP23327 699 aa15.41■□□□□ 0.06
AC055713.1-201ENST00000498967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
AC055713.1-201ENST00000498967 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
AC055713.1-201ENST00000498967 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
AC055713.1-201ENST00000498967 CNGB1Q14028 1251 aaPredicted RBP15.35■□□□□ 0.05
AC055713.1-201ENST00000498967 TRIM44Q96DX7 344 aaPredicted RBP15.34■□□□□ 0.05
AC055713.1-201ENST00000498967 SLC24A1O60721 1099 aa15.33■□□□□ 0.05
AC055713.1-201ENST00000498967 DIEXFQ68CQ4 756 aaKnown RBP15.27■□□□□ 0.04
AC055713.1-201ENST00000498967 ANP32EQ9BTT0 268 aa15.26■□□□□ 0.03
AC055713.1-201ENST00000498967 ANP32CO43423 234 aa15.25■□□□□ 0.03
AC055713.1-201ENST00000498967 ITGAEP38570 1179 aa15.23■□□□□ 0.03
AC055713.1-201ENST00000498967 NCLP19338 710 aaKnown RBP15.19■□□□□ 0.02
AC055713.1-201ENST00000498967 BCL11AQ9H165 835 aa15.15■□□□□ 0.02
AC055713.1-201ENST00000498967 ZRSR1Q15695 479 aaKnown RBP15.07■□□□□ 0
AC055713.1-201ENST00000498967 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
AC055713.1-201ENST00000498967 BCANQ96GW7 911 aa15.04■□□□□ -0
AC055713.1-201ENST00000498967 GOLGA6L22H0YM25 854 aa15.03■□□□□ -0
AC055713.1-201ENST00000498967 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
AC055713.1-201ENST00000498967 GTF3C3Q9Y5Q9 886 aa15□□□□□ -0.01
AC055713.1-201ENST00000498967 NRDCO43847 1150 aa14.99□□□□□ -0.01
AC055713.1-201ENST00000498967 L1TD1Q5T7N2 865 aaKnown RBP14.99□□□□□ -0.01
AC055713.1-201ENST00000498967 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
AC055713.1-201ENST00000498967 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
AC055713.1-201ENST00000498967 GOLGA6L6A8MZA4 724 aa14.95□□□□□ -0.02
AC055713.1-201ENST00000498967 BECN1Q14457 450 aa14.94□□□□□ -0.02
AC055713.1-201ENST00000498967 DNTTIP2Q5QJE6 756 aaKnown RBP14.94□□□□□ -0.02
AC055713.1-201ENST00000498967 TRIM52Q96A61 297 aa14.94□□□□□ -0.02
AC055713.1-201ENST00000498967 MYH16Q9H6N6 1097 aa14.91□□□□□ -0.02
AC055713.1-201ENST00000498967 PTMAP06454 111 aaKnown RBP14.9□□□□□ -0.02
AC055713.1-201ENST00000498967 CHAF1AQ13111 956 aaPredicted RBP14.86□□□□□ -0.03
AC055713.1-201ENST00000498967 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
AC055713.1-201ENST00000498967 FAM50AQ14320 339 aaKnown RBP14.84□□□□□ -0.03
AC055713.1-201ENST00000498967 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.03
AC055713.1-201ENST00000498967 ZNF326Q5BKZ1 582 aaKnown RBP14.81□□□□□ -0.04
AC055713.1-201ENST00000498967 ARXQ96QS3 562 aa14.81□□□□□ -0.04
AC055713.1-201ENST00000498967 CALRP27797 417 aaKnown RBP14.79□□□□□ -0.04
AC055713.1-201ENST00000498967 NBR1Q14596 966 aa14.79□□□□□ -0.04
AC055713.1-201ENST00000498967 USP35Q9P2H5 1018 aa14.78□□□□□ -0.04
AC055713.1-201ENST00000498967 NEUROD1Q13562 356 aa14.77□□□□□ -0.05
AC055713.1-201ENST00000498967 CCDC136Q96JN2 1154 aa14.75□□□□□ -0.05
AC055713.1-201ENST00000498967 CASC1Q6TDU7 716 aa14.73□□□□□ -0.05
AC055713.1-201ENST00000498967 TNNT3P45378 269 aaPredicted RBP14.7□□□□□ -0.06
AC055713.1-201ENST00000498967 NAP1L5Q96NT1 182 aaPredicted RBP14.7□□□□□ -0.06
AC055713.1-201ENST00000498967 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
AC055713.1-201ENST00000498967 KIAA2012Q0VF49 1180 aa14.67□□□□□ -0.06
AC055713.1-201ENST00000498967 ACIN1Q9UKV3 1341 aaKnown RBP14.65□□□□□ -0.06
AC055713.1-201ENST00000498967 FKBP8Q14318 412 aa14.61□□□□□ -0.07
AC055713.1-201ENST00000498967 NOC3LQ8WTT2 800 aaKnown RBP14.61□□□□□ -0.07
AC055713.1-201ENST00000498967 PTMSP20962 102 aa14.61□□□□□ -0.07
AC055713.1-201ENST00000498967 PNNQ9H307 717 aaKnown RBP14.61□□□□□ -0.07
AC055713.1-201ENST00000498967 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
AC055713.1-201ENST00000498967 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
AC055713.1-201ENST00000498967 MSNP26038 577 aaKnown RBP14.57□□□□□ -0.08
AC055713.1-201ENST00000498967 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.08
AC055713.1-201ENST00000498967 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
AC055713.1-201ENST00000498967 TULP1O00294 542 aaPredicted RBP14.56□□□□□ -0.08
AC055713.1-201ENST00000498967 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
AC055713.1-201ENST00000498967 HNRNPUQ00839 825 aaKnown RBP eCLIP14.54□□□□□ -0.08
AC055713.1-201ENST00000498967 STAG3Q9UJ98 1225 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms