RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
PHC3-214ENST00000494943 HECTD1Q9ULT8 2610 aa3.52□□□□□ -1.85
PHC3-214ENST00000494943 KRTAP13-3Q3SY46 172 aa3.51□□□□□ -1.85
PHC3-214ENST00000494943 KRTAP10-11P60412 298 aa3.51□□□□□ -1.85
PHC3-214ENST00000494943 KRTAP1-1Q07627 177 aa3.5□□□□□ -1.85
PHC3-214ENST00000494943 A0A087WTM6 91 aa3.5□□□□□ -1.85
PHC3-214ENST00000494943 MXRA5Q9NR99 2828 aa3.49□□□□□ -1.85
PHC3-214ENST00000494943 ANKRD17O75179 2603 aaKnown RBP3.49□□□□□ -1.85
PHC3-214ENST00000494943 A0A0D9SG42 100 aa3.49□□□□□ -1.85
PHC3-214ENST00000494943 H0YAA0 97 aa3.48□□□□□ -1.85
PHC3-214ENST00000494943 Q6ZSA8 131 aa3.48□□□□□ -1.85
PHC3-214ENST00000494943 NSD1Q96L73 2696 aaPredicted RBP3.48□□□□□ -1.85
PHC3-214ENST00000494943 ITPR3Q14573 2671 aa3.48□□□□□ -1.85
PHC3-214ENST00000494943 MAP1AP78559 2803 aaPredicted RBP3.48□□□□□ -1.85
PHC3-214ENST00000494943 C2CD3Q4AC94 2353 aa3.47□□□□□ -1.85
PHC3-214ENST00000494943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.46□□□□□ -1.86
PHC3-214ENST00000494943 ZANQ9Y493 2812 aa3.46□□□□□ -1.86
PHC3-214ENST00000494943 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
PHC3-214ENST00000494943 FBN1P35555 2871 aaKnown RBP3.45□□□□□ -1.86
PHC3-214ENST00000494943 LYSTQ99698 3801 aa3.45□□□□□ -1.86
PHC3-214ENST00000494943 TRRAPQ9Y4A5 3859 aa3.45□□□□□ -1.86
PHC3-214ENST00000494943 SMR3AQ99954 134 aa3.43□□□□□ -1.86
PHC3-214ENST00000494943 FLNBO75369 2602 aaKnown RBP3.43□□□□□ -1.86
PHC3-214ENST00000494943 CSPG4Q6UVK1 2322 aa3.43□□□□□ -1.86
PHC3-214ENST00000494943 S4R3F8 94 aa3.43□□□□□ -1.86
PHC3-214ENST00000494943 ALMS1Q8TCU4 4167 aa3.42□□□□□ -1.86
PHC3-214ENST00000494943 NIPBLQ6KC79 2804 aaeCLIP3.41□□□□□ -1.86
PHC3-214ENST00000494943 MYO9AB2RTY4 2548 aa3.4□□□□□ -1.86
PHC3-214ENST00000494943 P0C880 135 aa3.4□□□□□ -1.87
PHC3-214ENST00000494943 NBASA2RRP1 2371 aa3.4□□□□□ -1.87
PHC3-214ENST00000494943 FLNAP21333 2647 aaKnown RBP3.39□□□□□ -1.87
PHC3-214ENST00000494943 NAV2Q8IVL1 2488 aa3.38□□□□□ -1.87
PHC3-214ENST00000494943 KRTAP1-5Q9BYS1 174 aa3.38□□□□□ -1.87
PHC3-214ENST00000494943 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
PHC3-214ENST00000494943 SPG11Q96JI7 2443 aa3.37□□□□□ -1.87
PHC3-214ENST00000494943 C9orf92A6NGG3 77 aa3.37□□□□□ -1.87
PHC3-214ENST00000494943 KRTAP24-1Q3LI83 254 aa3.37□□□□□ -1.87
PHC3-214ENST00000494943 POLQO75417 2590 aa3.36□□□□□ -1.87
PHC3-214ENST00000494943 M0QZ58 72 aa3.36□□□□□ -1.87
PHC3-214ENST00000494943 DNAH7Q8WXX0 4024 aa3.36□□□□□ -1.87
PHC3-214ENST00000494943 CSMD3Q7Z407 3707 aa3.36□□□□□ -1.87
PHC3-214ENST00000494943 FN1P02751 2386 aaKnown RBP3.35□□□□□ -1.87
PHC3-214ENST00000494943 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
PHC3-214ENST00000494943 FBN3Q75N90 2809 aa3.35□□□□□ -1.87
PHC3-214ENST00000494943 TENM2Q9NT68 2774 aa3.34□□□□□ -1.87
PHC3-214ENST00000494943 PRKDCP78527 4128 aaKnown RBP3.34□□□□□ -1.87
PHC3-214ENST00000494943 F8P00451 2351 aa3.33□□□□□ -1.88
PHC3-214ENST00000494943 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
PHC3-214ENST00000494943 TENM1Q9UKZ4 2725 aa3.33□□□□□ -1.88
PHC3-214ENST00000494943 DYNC2H1Q8NCM8 4307 aaKnown RBP3.32□□□□□ -1.88
PHC3-214ENST00000494943 TEP1Q99973 2627 aaKnown RBP3.31□□□□□ -1.88
PHC3-214ENST00000494943 Q6ZRN7 208 aaPredicted RBP3.31□□□□□ -1.88
PHC3-214ENST00000494943 MEGF8Q7Z7M0 2845 aa3.31□□□□□ -1.88
PHC3-214ENST00000494943 HIVEP2P31629 2446 aa3.29□□□□□ -1.88
PHC3-214ENST00000494943 DNAH9Q9NYC9 4486 aa3.29□□□□□ -1.88
PHC3-214ENST00000494943 FRAS1Q86XX4 4008 aa3.28□□□□□ -1.88
PHC3-214ENST00000494943 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
PHC3-214ENST00000494943 KRTAP13-2Q52LG2 175 aa3.28□□□□□ -1.88
PHC3-214ENST00000494943 PKD1L1Q8TDX9 2849 aa3.28□□□□□ -1.88
PHC3-214ENST00000494943 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
PHC3-214ENST00000494943 SETD2Q9BYW2 2564 aaPredicted RBP3.26□□□□□ -1.89
PHC3-214ENST00000494943 ACANP16112 2415 aa3.26□□□□□ -1.89
PHC3-214ENST00000494943 DNAH10Q8IVF4 4471 aa3.26□□□□□ -1.89
PHC3-214ENST00000494943 VPS13DQ5THJ4 4388 aa3.25□□□□□ -1.89
PHC3-214ENST00000494943 VWFP04275 2813 aa3.25□□□□□ -1.89
PHC3-214ENST00000494943 DNAH6Q9C0G6 4158 aa3.25□□□□□ -1.89
PHC3-214ENST00000494943 TLN2Q9Y4G6 2542 aa3.24□□□□□ -1.89
PHC3-214ENST00000494943 COL7A1Q02388 2944 aa3.23□□□□□ -1.89
PHC3-214ENST00000494943 CCDC168Q8NDH2 2452 aa3.23□□□□□ -1.89
PHC3-214ENST00000494943 R4GN34 69 aa3.22□□□□□ -1.89
PHC3-214ENST00000494943 HUWE1Q7Z6Z7 4374 aaKnown RBP3.22□□□□□ -1.89
PHC3-214ENST00000494943 HECTD4Q9Y4D8 3996 aa3.2□□□□□ -1.9
PHC3-214ENST00000494943 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
PHC3-214ENST00000494943 MTORP42345 2549 aa3.19□□□□□ -1.9
PHC3-214ENST00000494943 NOTCH2Q04721 2471 aa3.18□□□□□ -1.9
PHC3-214ENST00000494943 COL6A5A8TX70 2615 aa3.17□□□□□ -1.9
PHC3-214ENST00000494943 DNAH17Q9UFH2 4485 aa3.17□□□□□ -1.9
PHC3-214ENST00000494943 STAB1Q9NY15 2570 aa3.17□□□□□ -1.9
PHC3-214ENST00000494943 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
PHC3-214ENST00000494943 RYR3Q15413 4870 aa3.16□□□□□ -1.9
PHC3-214ENST00000494943 KMT2CQ8NEZ4 4911 aaKnown RBP3.16□□□□□ -1.9
PHC3-214ENST00000494943 STARD9Q9P2P6 4700 aa3.16□□□□□ -1.9
PHC3-214ENST00000494943 SACSQ9NZJ4 4579 aa3.16□□□□□ -1.9
PHC3-214ENST00000494943 XP32Q5T750 250 aa3.16□□□□□ -1.9
PHC3-214ENST00000494943 RYR2Q92736 4967 aa3.15□□□□□ -1.9
PHC3-214ENST00000494943 KRTAP1-4P0C5Y4 121 aa3.15□□□□□ -1.91
PHC3-214ENST00000494943 ATRQ13535 2644 aa3.15□□□□□ -1.91
PHC3-214ENST00000494943 SONP18583 2426 aaKnown RBP3.14□□□□□ -1.91
PHC3-214ENST00000494943 NBEAL2Q6ZNJ1 2754 aa3.14□□□□□ -1.91
PHC3-214ENST00000494943 JMJD1CQ15652 2540 aa3.13□□□□□ -1.91
PHC3-214ENST00000494943 KRTAP10-1P60331 282 aa3.13□□□□□ -1.91
PHC3-214ENST00000494943 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
PHC3-214ENST00000494943 PLECQ15149 4684 aaKnown RBP3.13□□□□□ -1.91
PHC3-214ENST00000494943 INE1O15225 51 aa3.12□□□□□ -1.91
PHC3-214ENST00000494943 KRTAP12-1P59990 96 aa3.12□□□□□ -1.91
PHC3-214ENST00000494943 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
PHC3-214ENST00000494943 KMT2AQ03164 3969 aa3.1□□□□□ -1.91
PHC3-214ENST00000494943 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
PHC3-214ENST00000494943 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
PHC3-214ENST00000494943 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms