RNA–Protein interactions for RNA: ENST00000435422.7

SGCD-202, Transcript of sarcoglycan delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SGCD, Length 9,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-202ENST00000435422 COL12A1Q99715 3063 aa3.86□□□□□ -1.79
SGCD-202ENST00000435422 WDFY4Q6ZS81 3184 aa3.86□□□□□ -1.79
SGCD-202ENST00000435422 TENM1Q9UKZ4 2725 aa3.85□□□□□ -1.79
SGCD-202ENST00000435422 VPS13AQ96RL7 3174 aa3.84□□□□□ -1.79
SGCD-202ENST00000435422 FRYLO94915 3013 aa3.84□□□□□ -1.8
SGCD-202ENST00000435422 XP32Q5T750 250 aa3.83□□□□□ -1.8
SGCD-202ENST00000435422 KRTAP7-1Q8IUC3 87 aa3.83□□□□□ -1.8
SGCD-202ENST00000435422 KRTAP13-1Q8IUC0 172 aa3.83□□□□□ -1.8
SGCD-202ENST00000435422 PRUNE2Q8WUY3 3088 aa3.83□□□□□ -1.8
SGCD-202ENST00000435422 NF1P21359 2839 aa3.81□□□□□ -1.8
SGCD-202ENST00000435422 DMXL2Q8TDJ6 3036 aa3.8□□□□□ -1.8
SGCD-202ENST00000435422 CELSR3Q9NYQ7 3312 aa3.79□□□□□ -1.8
SGCD-202ENST00000435422 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
SGCD-202ENST00000435422 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
SGCD-202ENST00000435422 FLNCQ14315 2725 aa3.75□□□□□ -1.81
SGCD-202ENST00000435422 HTTP42858 3142 aa3.74□□□□□ -1.81
SGCD-202ENST00000435422 LAMA1P25391 3075 aa3.74□□□□□ -1.81
SGCD-202ENST00000435422 CELSR2Q9HCU4 2923 aa3.73□□□□□ -1.81
SGCD-202ENST00000435422 NIPBLQ6KC79 2804 aaeCLIP3.73□□□□□ -1.81
SGCD-202ENST00000435422 ZZEF1O43149 2961 aa3.72□□□□□ -1.81
SGCD-202ENST00000435422 TNRC18O15417 2968 aaPredicted RBP3.72□□□□□ -1.81
SGCD-202ENST00000435422 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.81
SGCD-202ENST00000435422 PDZD2O15018 2839 aa3.71□□□□□ -1.82
SGCD-202ENST00000435422 UNC80Q8N2C7 3258 aa3.7□□□□□ -1.82
SGCD-202ENST00000435422 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
SGCD-202ENST00000435422 MKI67P46013 3256 aaKnown RBP3.69□□□□□ -1.82
SGCD-202ENST00000435422 TACC2O95359 2948 aa3.68□□□□□ -1.82
SGCD-202ENST00000435422 DNAH14Q0VDD8 3507 aa3.68□□□□□ -1.82
SGCD-202ENST00000435422 ATMQ13315 3056 aa3.68□□□□□ -1.82
SGCD-202ENST00000435422 CELSR1Q9NYQ6 3014 aa3.67□□□□□ -1.82
SGCD-202ENST00000435422 INE1O15225 51 aa3.67□□□□□ -1.82
SGCD-202ENST00000435422 COL6A3P12111 3177 aa3.66□□□□□ -1.82
SGCD-202ENST00000435422 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.82
SGCD-202ENST00000435422 VWFP04275 2813 aa3.64□□□□□ -1.83
SGCD-202ENST00000435422 CFAP47Q6ZTR5 3102 aa3.64□□□□□ -1.83
SGCD-202ENST00000435422 BOD1L1Q8NFC6 3051 aa3.64□□□□□ -1.83
SGCD-202ENST00000435422 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
SGCD-202ENST00000435422 ZANQ9Y493 2812 aa3.61□□□□□ -1.83
SGCD-202ENST00000435422 NBEAQ8NFP9 2946 aa3.61□□□□□ -1.83
SGCD-202ENST00000435422 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
SGCD-202ENST00000435422 ADGRG4Q8IZF6 3080 aa3.6□□□□□ -1.83
SGCD-202ENST00000435422 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
SGCD-202ENST00000435422 DCHS2Q6V1P9 2916 aa3.59□□□□□ -1.83
SGCD-202ENST00000435422 USP34Q70CQ2 3546 aa3.58□□□□□ -1.84
SGCD-202ENST00000435422 LAMA3Q16787 3333 aa3.58□□□□□ -1.84
SGCD-202ENST00000435422 VCANP13611 3396 aa3.57□□□□□ -1.84
SGCD-202ENST00000435422 DMXL1Q9Y485 3027 aa3.57□□□□□ -1.84
SGCD-202ENST00000435422 SPEGQ15772 3267 aa3.56□□□□□ -1.84
SGCD-202ENST00000435422 ZFHX4Q86UP3 3567 aa3.55□□□□□ -1.84
SGCD-202ENST00000435422 PKD1L1Q8TDX9 2849 aa3.55□□□□□ -1.84
SGCD-202ENST00000435422 BRCA2P51587 3418 aa3.54□□□□□ -1.84
SGCD-202ENST00000435422 TENM2Q9NT68 2774 aa3.52□□□□□ -1.85
SGCD-202ENST00000435422 TENM4Q6N022 2769 aa3.52□□□□□ -1.85
SGCD-202ENST00000435422 SZT2Q5T011 3432 aa3.5□□□□□ -1.85
SGCD-202ENST00000435422 FBN2P35556 2912 aa3.48□□□□□ -1.85
SGCD-202ENST00000435422 SPTBN5Q9NRC6 3674 aaKnown RBP3.47□□□□□ -1.85
SGCD-202ENST00000435422 ZFHX3Q15911 3703 aa3.46□□□□□ -1.86
SGCD-202ENST00000435422 MXRA5Q9NR99 2828 aa3.46□□□□□ -1.86
SGCD-202ENST00000435422 CDH23Q9H251 3354 aa3.42□□□□□ -1.86
SGCD-202ENST00000435422 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
SGCD-202ENST00000435422 COL7A1Q02388 2944 aa3.42□□□□□ -1.86
SGCD-202ENST00000435422 NBPF19A0A087WUL8 3843 aa3.42□□□□□ -1.86
SGCD-202ENST00000435422 MEGF8Q7Z7M0 2845 aa3.41□□□□□ -1.86
SGCD-202ENST00000435422 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.86
SGCD-202ENST00000435422 WDFY3Q8IZQ1 3526 aa3.4□□□□□ -1.86
SGCD-202ENST00000435422 ASPMQ8IZT6 3477 aa3.38□□□□□ -1.87
SGCD-202ENST00000435422 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
SGCD-202ENST00000435422 LOC400499M0QZD8 3231 aa3.36□□□□□ -1.87
SGCD-202ENST00000435422 LAMA5O15230 3695 aa3.35□□□□□ -1.87
SGCD-202ENST00000435422 SMG1Q96Q15 3661 aaKnown RBP3.34□□□□□ -1.87
SGCD-202ENST00000435422 HRNRQ86YZ3 2850 aaPredicted RBP3.33□□□□□ -1.88
SGCD-202ENST00000435422 MYO15AQ9UKN7 3530 aa3.31□□□□□ -1.88
SGCD-202ENST00000435422 KRTAP3-1Q9BYR8 98 aa3.31□□□□□ -1.88
SGCD-202ENST00000435422 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
SGCD-202ENST00000435422 KRTAP21-3Q3LHN1 58 aa3.29□□□□□ -1.88
SGCD-202ENST00000435422 SPENQ96T58 3664 aaKnown RBP3.29□□□□□ -1.88
SGCD-202ENST00000435422 EYSQ5T1H1 3165 aa3.28□□□□□ -1.88
SGCD-202ENST00000435422 OTOGQ6ZRI0 2925 aa3.27□□□□□ -1.89
SGCD-202ENST00000435422 DMDP11532 3685 aa3.27□□□□□ -1.89
SGCD-202ENST00000435422 CSMD1Q96PZ7 3565 aa3.25□□□□□ -1.89
SGCD-202ENST00000435422 DCHS1Q96JQ0 3298 aa3.24□□□□□ -1.89
SGCD-202ENST00000435422 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
SGCD-202ENST00000435422 FBN3Q75N90 2809 aa3.22□□□□□ -1.89
SGCD-202ENST00000435422 RELNP78509 3460 aa3.2□□□□□ -1.9
SGCD-202ENST00000435422 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
SGCD-202ENST00000435422 VPS13CQ709C8 3753 aa3.12□□□□□ -1.91
SGCD-202ENST00000435422 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
SGCD-202ENST00000435422 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
SGCD-202ENST00000435422 CSMD3Q7Z407 3707 aa3.11□□□□□ -1.91
SGCD-202ENST00000435422 KRTAP3-2Q9BYR7 98 aa3.1□□□□□ -1.91
SGCD-202ENST00000435422 FBN1P35555 2871 aaKnown RBP3.1□□□□□ -1.91
SGCD-202ENST00000435422 KRTAP3-3Q9BYR6 98 aa3.08□□□□□ -1.92
SGCD-202ENST00000435422 CUBNO60494 3623 aa3.06□□□□□ -1.92
SGCD-202ENST00000435422 LORP23490 312 aaPredicted RBP3.05□□□□□ -1.92
SGCD-202ENST00000435422 AKAP9Q99996 3911 aa3.04□□□□□ -1.92
SGCD-202ENST00000435422 TRRAPQ9Y4A5 3859 aa3.03□□□□□ -1.92
SGCD-202ENST00000435422 SVEP1Q4LDE5 3571 aa2.99□□□□□ -1.93
SGCD-202ENST00000435422 ALMS1Q8TCU4 4167 aa2.99□□□□□ -1.93
SGCD-202ENST00000435422 MUC3AQ02505 3323 aa2.96□□□□□ -1.94
SGCD-202ENST00000435422 CSMD2Q7Z408 3487 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms