RNA–Protein interactions for RNA: ENST00000435422.7

SGCD-202, Transcript of sarcoglycan delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SGCD, Length 9,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-202ENST00000435422 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
SGCD-202ENST00000435422 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.5
SGCD-202ENST00000435422 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
SGCD-202ENST00000435422 MYT1Q01538 1121 aa11.75□□□□□ -0.53
SGCD-202ENST00000435422 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
SGCD-202ENST00000435422 EHMT2Q96KQ7 1210 aa11.58□□□□□ -0.56
SGCD-202ENST00000435422 CENPBP07199 599 aaPredicted RBP11.39□□□□□ -0.59
SGCD-202ENST00000435422 SUPT5HO00267 1087 aaKnown RBP11.37□□□□□ -0.59
SGCD-202ENST00000435422 APLP2Q06481 763 aa11.32□□□□□ -0.6
SGCD-202ENST00000435422 NEFLP07196 543 aa11.29□□□□□ -0.6
SGCD-202ENST00000435422 TTBK1Q5TCY1 1321 aaPredicted RBP11.26□□□□□ -0.61
SGCD-202ENST00000435422 DAXXQ9UER7 740 aaPredicted RBP11.26□□□□□ -0.61
SGCD-202ENST00000435422 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
SGCD-202ENST00000435422 PCGF6Q9BYE7 350 aa11.14□□□□□ -0.63
SGCD-202ENST00000435422 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
SGCD-202ENST00000435422 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
SGCD-202ENST00000435422 SHROOM4Q9ULL8 1493 aa10.97□□□□□ -0.65
SGCD-202ENST00000435422 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.65
SGCD-202ENST00000435422 RANGAP1P46060 587 aaPredicted RBP10.93□□□□□ -0.66
SGCD-202ENST00000435422 ZEB1P37275 1124 aaPredicted RBP10.9□□□□□ -0.66
SGCD-202ENST00000435422 ATP1B4Q9UN42 357 aaPredicted RBP10.89□□□□□ -0.67
SGCD-202ENST00000435422 CLSPNQ9HAW4 1339 aa10.8□□□□□ -0.68
SGCD-202ENST00000435422 POLR3GLQ9BT43 218 aa10.78□□□□□ -0.68
SGCD-202ENST00000435422 CNGB1Q14028 1251 aaPredicted RBP10.73□□□□□ -0.69
SGCD-202ENST00000435422 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
SGCD-202ENST00000435422 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.71
SGCD-202ENST00000435422 CHIC1Q5VXU3 224 aa10.59□□□□□ -0.71
SGCD-202ENST00000435422 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
SGCD-202ENST00000435422 GLIPR1L2Q4G1C9 344 aa10.56□□□□□ -0.72
SGCD-202ENST00000435422 BCL11AQ9H165 835 aa10.54□□□□□ -0.72
SGCD-202ENST00000435422 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
SGCD-202ENST00000435422 PPARGC1BQ86YN6 1023 aaKnown RBP10.52□□□□□ -0.73
SGCD-202ENST00000435422 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
SGCD-202ENST00000435422 BCANQ96GW7 911 aa10.47□□□□□ -0.73
SGCD-202ENST00000435422 ITGAEP38570 1179 aa10.44□□□□□ -0.74
SGCD-202ENST00000435422 ANP32BQ92688 251 aaKnown RBP10.43□□□□□ -0.74
SGCD-202ENST00000435422 SLC24A1O60721 1099 aa10.41□□□□□ -0.74
SGCD-202ENST00000435422 TRIM41Q8WV44 630 aa10.41□□□□□ -0.74
SGCD-202ENST00000435422 CDK11AQ9UQ88 783 aaPredicted RBP10.4□□□□□ -0.74
SGCD-202ENST00000435422 HRCP23327 699 aa10.4□□□□□ -0.75
SGCD-202ENST00000435422 CANXP27824 592 aaKnown RBP10.35□□□□□ -0.75
SGCD-202ENST00000435422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.33□□□□□ -0.76
SGCD-202ENST00000435422 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
SGCD-202ENST00000435422 ANP32AP39687 249 aaKnown RBP10.33□□□□□ -0.76
SGCD-202ENST00000435422 NPM2Q86SE8 214 aaKnown RBP10.32□□□□□ -0.76
SGCD-202ENST00000435422 HSP90AA1P07900 732 aaKnown RBP10.29□□□□□ -0.76
SGCD-202ENST00000435422 ARXQ96QS3 562 aa10.29□□□□□ -0.76
SGCD-202ENST00000435422 DIEXFQ68CQ4 756 aaKnown RBP10.27□□□□□ -0.77
SGCD-202ENST00000435422 TRIM26Q12899 539 aaPredicted RBP10.26□□□□□ -0.77
SGCD-202ENST00000435422 GTF3C3Q9Y5Q9 886 aa10.25□□□□□ -0.77
SGCD-202ENST00000435422 CDK11BP21127 795 aaKnown RBP10.24□□□□□ -0.77
SGCD-202ENST00000435422 NBR1Q14596 966 aa10.19□□□□□ -0.78
SGCD-202ENST00000435422 TNNT2P45379 298 aaPredicted RBP10.18□□□□□ -0.78
SGCD-202ENST00000435422 AMER1Q5JTC6 1135 aaPredicted RBP10.14□□□□□ -0.79
SGCD-202ENST00000435422 ANP32CO43423 234 aa10.12□□□□□ -0.79
SGCD-202ENST00000435422 NEFMP07197 916 aa10.12□□□□□ -0.79
SGCD-202ENST00000435422 ZNF326Q5BKZ1 582 aaKnown RBP10.11□□□□□ -0.79
SGCD-202ENST00000435422 UPF2Q9HAU5 1272 aaKnown RBP10.1□□□□□ -0.79
SGCD-202ENST00000435422 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
SGCD-202ENST00000435422 TRIM52Q96A61 297 aa10.04□□□□□ -0.8
SGCD-202ENST00000435422 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
SGCD-202ENST00000435422 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
SGCD-202ENST00000435422 TRIM44Q96DX7 344 aaPredicted RBP10.01□□□□□ -0.81
SGCD-202ENST00000435422 DNTTIP2Q5QJE6 756 aaKnown RBP9.97□□□□□ -0.81
SGCD-202ENST00000435422 NCBP3Q53F19 620 aaKnown RBP9.95□□□□□ -0.82
SGCD-202ENST00000435422 NAP1L5Q96NT1 182 aaPredicted RBP9.94□□□□□ -0.82
SGCD-202ENST00000435422 PTMAP06454 111 aaKnown RBP9.94□□□□□ -0.82
SGCD-202ENST00000435422 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
SGCD-202ENST00000435422 FKBP8Q14318 412 aa9.92□□□□□ -0.82
SGCD-202ENST00000435422 NCLP19338 710 aaKnown RBP9.9□□□□□ -0.82
SGCD-202ENST00000435422 RTN4Q9NQC3 1192 aaKnown RBP9.89□□□□□ -0.83
SGCD-202ENST00000435422 ZRSR1Q15695 479 aaKnown RBP9.89□□□□□ -0.83
SGCD-202ENST00000435422 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
SGCD-202ENST00000435422 LOC105371045A0A1W2PR82 267 aa9.85□□□□□ -0.83
SGCD-202ENST00000435422 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.83□□□□□ -0.84
SGCD-202ENST00000435422 CCDC136Q96JN2 1154 aa9.83□□□□□ -0.84
SGCD-202ENST00000435422 GOLGA6L22H0YM25 854 aa9.82□□□□□ -0.84
SGCD-202ENST00000435422 SALL2Q9Y467 1007 aaPredicted RBP9.82□□□□□ -0.84
SGCD-202ENST00000435422 A0A0G2JS52 829 aa9.81□□□□□ -0.84
SGCD-202ENST00000435422 MYH16Q9H6N6 1097 aa9.81□□□□□ -0.84
SGCD-202ENST00000435422 NISCHQ9Y2I1 1504 aa9.8□□□□□ -0.84
SGCD-202ENST00000435422 BECN1Q14457 450 aa9.8□□□□□ -0.84
SGCD-202ENST00000435422 TAOK2Q9UL54 1235 aa9.78□□□□□ -0.84
SGCD-202ENST00000435422 ARID4BQ4LE39 1312 aaPredicted RBP9.78□□□□□ -0.84
SGCD-202ENST00000435422 GOLGA6L6A8MZA4 724 aa9.78□□□□□ -0.84
SGCD-202ENST00000435422 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
SGCD-202ENST00000435422 CLSTN1O94985 981 aa9.77□□□□□ -0.84
SGCD-202ENST00000435422 ANP32EQ9BTT0 268 aa9.77□□□□□ -0.84
SGCD-202ENST00000435422 ERICH6BQ5W0A0 696 aa9.77□□□□□ -0.85
SGCD-202ENST00000435422 HNRNPUQ00839 825 aaKnown RBP eCLIP9.77□□□□□ -0.85
SGCD-202ENST00000435422 FAM9BQ8IZU0 186 aa9.76□□□□□ -0.85
SGCD-202ENST00000435422 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
SGCD-202ENST00000435422 ARID3AQ99856 593 aa9.75□□□□□ -0.85
SGCD-202ENST00000435422 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
SGCD-202ENST00000435422 TNNT3P45378 269 aaPredicted RBP9.74□□□□□ -0.85
SGCD-202ENST00000435422 SCAF1Q9H7N4 1312 aaKnown RBP9.74□□□□□ -0.85
SGCD-202ENST00000435422 CALRP27797 417 aaKnown RBP9.73□□□□□ -0.85
SGCD-202ENST00000435422 PLPPR3Q6T4P5 718 aa9.73□□□□□ -0.85
SGCD-202ENST00000435422 PRM3Q9NNZ6 103 aa9.73□□□□□ -0.85
SGCD-202ENST00000435422 IRX6P78412 446 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms