RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 CDK2AP2O75956 126 aa9.93□□□□□ -0.82
NPC1L1-203ENST00000423141 Q5W150 140 aa9.93□□□□□ -0.82
NPC1L1-203ENST00000423141 LINC00483Q53H64 154 aa9.91□□□□□ -0.82
NPC1L1-203ENST00000423141 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
NPC1L1-203ENST00000423141 APLNQ9ULZ1 77 aa9.89□□□□□ -0.83
NPC1L1-203ENST00000423141 ALMS1Q8TCU4 4167 aa9.88□□□□□ -0.83
NPC1L1-203ENST00000423141 MDFIQ99750 246 aa9.88□□□□□ -0.83
NPC1L1-203ENST00000423141 SPINK6Q6UWN8 80 aa9.87□□□□□ -0.83
NPC1L1-203ENST00000423141 DYNC2H1Q8NCM8 4307 aaKnown RBP9.87□□□□□ -0.83
NPC1L1-203ENST00000423141 SPACA4Q8TDM5 124 aa9.86□□□□□ -0.83
NPC1L1-203ENST00000423141 HECTD4Q9Y4D8 3996 aa9.85□□□□□ -0.83
NPC1L1-203ENST00000423141 KRTAP13-3Q3SY46 172 aa9.85□□□□□ -0.83
NPC1L1-203ENST00000423141 Q6ZRN7 208 aaPredicted RBP9.82□□□□□ -0.84
NPC1L1-203ENST00000423141 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
NPC1L1-203ENST00000423141 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
NPC1L1-203ENST00000423141 PRAC1Q96KF2 57 aa9.79□□□□□ -0.84
NPC1L1-203ENST00000423141 ZNF706Q9Y5V0 76 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-203ENST00000423141 LINC00313P59037 77 aa9.78□□□□□ -0.84
NPC1L1-203ENST00000423141 DNAH17Q9UFH2 4485 aa9.77□□□□□ -0.85
NPC1L1-203ENST00000423141 IGLV5-52A0A0A0MRZ9 124 aa9.76□□□□□ -0.85
NPC1L1-203ENST00000423141 ACYP2P14621 99 aa9.76□□□□□ -0.85
NPC1L1-203ENST00000423141 ADM2Q7Z4H4 148 aa9.76□□□□□ -0.85
NPC1L1-203ENST00000423141 RETNLBQ9BQ08 111 aa9.74□□□□□ -0.85
NPC1L1-203ENST00000423141 ZNF861PO60384 105 aa9.73□□□□□ -0.85
NPC1L1-203ENST00000423141 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.85
NPC1L1-203ENST00000423141 DMAC1Q96GE9 116 aa9.71□□□□□ -0.85
NPC1L1-203ENST00000423141 STARD9Q9P2P6 4700 aa9.71□□□□□ -0.85
NPC1L1-203ENST00000423141 DNAH2Q9P225 4427 aa9.7□□□□□ -0.86
NPC1L1-203ENST00000423141 VPS13DQ5THJ4 4388 aa9.68□□□□□ -0.86
NPC1L1-203ENST00000423141 KMT2AQ03164 3969 aa9.68□□□□□ -0.86
NPC1L1-203ENST00000423141 A0A1B0GU69 56 aa9.67□□□□□ -0.86
NPC1L1-203ENST00000423141 A0A087WTM6 91 aa9.67□□□□□ -0.86
NPC1L1-203ENST00000423141 RTL8CO15255 209 aa9.66□□□□□ -0.86
NPC1L1-203ENST00000423141 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
NPC1L1-203ENST00000423141 FBN3Q75N90 2809 aa9.63□□□□□ -0.87
NPC1L1-203ENST00000423141 PLA2G1BP04054 148 aaKnown RBP9.61□□□□□ -0.87
NPC1L1-203ENST00000423141 SPATA8Q6RVD6 105 aa9.61□□□□□ -0.87
NPC1L1-203ENST00000423141 MEGF8Q7Z7M0 2845 aa9.6□□□□□ -0.87
NPC1L1-203ENST00000423141 TGP01266 2768 aa9.59□□□□□ -0.87
NPC1L1-203ENST00000423141 FAM229AH3BQW9 127 aa9.58□□□□□ -0.88
NPC1L1-203ENST00000423141 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
NPC1L1-203ENST00000423141 IGLV7-43P04211 117 aa9.57□□□□□ -0.88
NPC1L1-203ENST00000423141 DNAH6Q9C0G6 4158 aa9.56□□□□□ -0.88
NPC1L1-203ENST00000423141 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
NPC1L1-203ENST00000423141 PRKDCP78527 4128 aaKnown RBP9.55□□□□□ -0.88
NPC1L1-203ENST00000423141 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
NPC1L1-203ENST00000423141 NUPR2A6NF83 97 aa9.52□□□□□ -0.89
NPC1L1-203ENST00000423141 UQCR11O14957 56 aa9.52□□□□□ -0.89
NPC1L1-203ENST00000423141 IGKV2D-30A0A075B6S6 120 aa9.5□□□□□ -0.89
NPC1L1-203ENST00000423141 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
NPC1L1-203ENST00000423141 SSBP3-AS1Q7Z2R9 100 aa9.49□□□□□ -0.89
NPC1L1-203ENST00000423141 KRTAP16-1A8MUX0 517 aa9.47□□□□□ -0.89
NPC1L1-203ENST00000423141 DNAH5Q8TE73 4624 aa9.45□□□□□ -0.9
NPC1L1-203ENST00000423141 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
NPC1L1-203ENST00000423141 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
NPC1L1-203ENST00000423141 LRP1BQ9NZR2 4599 aa9.4□□□□□ -0.9
NPC1L1-203ENST00000423141 SPINK1P00995 79 aa9.39□□□□□ -0.91
NPC1L1-203ENST00000423141 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
NPC1L1-203ENST00000423141 Q8N1X5 172 aa9.33□□□□□ -0.92
NPC1L1-203ENST00000423141 C1orf134Q5TEV5 83 aa9.3□□□□□ -0.92
NPC1L1-203ENST00000423141 KRTAP10-2P60368 255 aa9.28□□□□□ -0.92
NPC1L1-203ENST00000423141 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
NPC1L1-203ENST00000423141 KRTAP1-4P0C5Y4 121 aa9.23□□□□□ -0.93
NPC1L1-203ENST00000423141 H0YAA0 97 aa9.21□□□□□ -0.94
NPC1L1-203ENST00000423141 Q6ZSA8 131 aa9.21□□□□□ -0.94
NPC1L1-203ENST00000423141 PKD1P98161 4303 aa9.18□□□□□ -0.94
NPC1L1-203ENST00000423141 H3BS24 57 aa9.18□□□□□ -0.94
NPC1L1-203ENST00000423141 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
NPC1L1-203ENST00000423141 FAT2Q9NYQ8 4349 aa9.18□□□□□ -0.94
NPC1L1-203ENST00000423141 LY6G6CO95867 125 aa9.17□□□□□ -0.94
NPC1L1-203ENST00000423141 A8MUU9 505 aa9.15□□□□□ -0.94
NPC1L1-203ENST00000423141 KRTAP10-1P60331 282 aa9.15□□□□□ -0.95
NPC1L1-203ENST00000423141 LINC00304Q8N9R0 145 aa9.11□□□□□ -0.95
NPC1L1-203ENST00000423141 HYDINQ4G0P3 5121 aa9.1□□□□□ -0.95
NPC1L1-203ENST00000423141 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
NPC1L1-203ENST00000423141 A0A1B0GU33 70 aa9.05□□□□□ -0.96
NPC1L1-203ENST00000423141 KRTAP25-1Q3LHN0 102 aa9.05□□□□□ -0.96
NPC1L1-203ENST00000423141 KRTAP3-1Q9BYR8 98 aa9.05□□□□□ -0.96
NPC1L1-203ENST00000423141 C9orf92A6NGG3 77 aa9□□□□□ -0.97
NPC1L1-203ENST00000423141 H1FX-AS1Q4G0G2 97 aa9□□□□□ -0.97
NPC1L1-203ENST00000423141 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
NPC1L1-203ENST00000423141 PKHD1P08F94 4074 aa8.95□□□□□ -0.98
NPC1L1-203ENST00000423141 DNHD1Q96M86 4753 aa8.94□□□□□ -0.98
NPC1L1-203ENST00000423141 ROMO1P60602 79 aa8.93□□□□□ -0.98
NPC1L1-203ENST00000423141 SACSQ9NZJ4 4579 aa8.89□□□□□ -0.99
NPC1L1-203ENST00000423141 C20orf166-AS1Q96NR2 134 aa8.88□□□□□ -0.99
NPC1L1-203ENST00000423141 COX6B2Q6YFQ2 88 aa8.86□□□□□ -0.99
NPC1L1-203ENST00000423141 RPS29P62273 56 aaKnown RBP8.84□□□□□ -0.99
NPC1L1-203ENST00000423141 FAT1Q14517 4588 aa8.82□□□□□ -1
NPC1L1-203ENST00000423141 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
NPC1L1-203ENST00000423141 K7ERS5 55 aa8.78□□□□□ -1
NPC1L1-203ENST00000423141 SMR3BP02814 79 aaPredicted RBP8.76□□□□□ -1.01
NPC1L1-203ENST00000423141 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
NPC1L1-203ENST00000423141 P0C880 135 aa8.73□□□□□ -1.01
NPC1L1-203ENST00000423141 APOBP04114 4563 aaKnown RBP8.72□□□□□ -1.01
NPC1L1-203ENST00000423141 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
NPC1L1-203ENST00000423141 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
NPC1L1-203ENST00000423141 A0A0D9SG42 100 aa8.67□□□□□ -1.02
NPC1L1-203ENST00000423141 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
NPC1L1-203ENST00000423141 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms