RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 COL12A1Q99715 3063 aa5.09□□□□□ -1.59
CD109-202ENST00000422508 TNRC18O15417 2968 aaPredicted RBP5.09□□□□□ -1.6
CD109-202ENST00000422508 USP34Q70CQ2 3546 aa5.05□□□□□ -1.6
CD109-202ENST00000422508 ZZEF1O43149 2961 aa5.03□□□□□ -1.6
CD109-202ENST00000422508 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
CD109-202ENST00000422508 DMXL2Q8TDJ6 3036 aa5.02□□□□□ -1.61
CD109-202ENST00000422508 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
CD109-202ENST00000422508 CRYBG3Q68DQ2 2970 aa5□□□□□ -1.61
CD109-202ENST00000422508 H0YAA0 97 aa5□□□□□ -1.61
CD109-202ENST00000422508 TPRXLQ17RH7 258 aa5□□□□□ -1.61
CD109-202ENST00000422508 PRUNE2Q8WUY3 3088 aa4.99□□□□□ -1.61
CD109-202ENST00000422508 KRTAP21-3Q3LHN1 58 aa4.99□□□□□ -1.61
CD109-202ENST00000422508 NBEAQ8NFP9 2946 aa4.98□□□□□ -1.61
CD109-202ENST00000422508 KRTAP10-8P60410 259 aa4.95□□□□□ -1.62
CD109-202ENST00000422508 DCHS2Q6V1P9 2916 aa4.94□□□□□ -1.62
CD109-202ENST00000422508 REV3LO60673 3130 aa4.92□□□□□ -1.62
CD109-202ENST00000422508 ZANQ9Y493 2812 aa4.91□□□□□ -1.62
CD109-202ENST00000422508 XP32Q5T750 250 aa4.89□□□□□ -1.63
CD109-202ENST00000422508 LAMA1P25391 3075 aa4.89□□□□□ -1.63
CD109-202ENST00000422508 KRTAP7-1Q8IUC3 87 aa4.88□□□□□ -1.63
CD109-202ENST00000422508 CELSR1Q9NYQ6 3014 aa4.88□□□□□ -1.63
CD109-202ENST00000422508 TENM2Q9NT68 2774 aa4.88□□□□□ -1.63
CD109-202ENST00000422508 XIRP2A4UGR9 3374 aa4.88□□□□□ -1.63
CD109-202ENST00000422508 MXRA5Q9NR99 2828 aa4.88□□□□□ -1.63
CD109-202ENST00000422508 HRNRQ86YZ3 2850 aaPredicted RBP4.87□□□□□ -1.63
CD109-202ENST00000422508 RANBP2P49792 3224 aaKnown RBP4.85□□□□□ -1.63
CD109-202ENST00000422508 FBN2P35556 2912 aa4.85□□□□□ -1.63
CD109-202ENST00000422508 INE1O15225 51 aa4.85□□□□□ -1.63
CD109-202ENST00000422508 BOD1L1Q8NFC6 3051 aa4.84□□□□□ -1.63
CD109-202ENST00000422508 MKI67P46013 3256 aaKnown RBP4.82□□□□□ -1.64
CD109-202ENST00000422508 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
CD109-202ENST00000422508 TENM4Q6N022 2769 aa4.81□□□□□ -1.64
CD109-202ENST00000422508 DMXL1Q9Y485 3027 aa4.81□□□□□ -1.64
CD109-202ENST00000422508 VWFP04275 2813 aa4.77□□□□□ -1.65
CD109-202ENST00000422508 FREM2Q5SZK8 3169 aa4.76□□□□□ -1.65
CD109-202ENST00000422508 KRTAP1-4P0C5Y4 121 aa4.75□□□□□ -1.65
CD109-202ENST00000422508 ADGRG4Q8IZF6 3080 aa4.74□□□□□ -1.65
CD109-202ENST00000422508 COL6A3P12111 3177 aa4.74□□□□□ -1.65
CD109-202ENST00000422508 CELSR3Q9NYQ7 3312 aa4.74□□□□□ -1.65
CD109-202ENST00000422508 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
CD109-202ENST00000422508 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
CD109-202ENST00000422508 ZFHX3Q15911 3703 aa4.73□□□□□ -1.65
CD109-202ENST00000422508 PKD1L1Q8TDX9 2849 aa4.72□□□□□ -1.65
CD109-202ENST00000422508 ATMQ13315 3056 aa4.72□□□□□ -1.65
CD109-202ENST00000422508 KRTAP13-3Q3SY46 172 aa4.71□□□□□ -1.65
CD109-202ENST00000422508 NBPF19A0A087WUL8 3843 aa4.7□□□□□ -1.66
CD109-202ENST00000422508 UNC80Q8N2C7 3258 aa4.7□□□□□ -1.66
CD109-202ENST00000422508 HTTP42858 3142 aa4.68□□□□□ -1.66
CD109-202ENST00000422508 DNAH14Q0VDD8 3507 aa4.67□□□□□ -1.66
CD109-202ENST00000422508 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
CD109-202ENST00000422508 MEGF8Q7Z7M0 2845 aa4.61□□□□□ -1.67
CD109-202ENST00000422508 AKAP9Q99996 3911 aa4.59□□□□□ -1.67
CD109-202ENST00000422508 LAMA3Q16787 3333 aa4.58□□□□□ -1.68
CD109-202ENST00000422508 SPTBN5Q9NRC6 3674 aaKnown RBP4.57□□□□□ -1.68
CD109-202ENST00000422508 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
CD109-202ENST00000422508 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
CD109-202ENST00000422508 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
CD109-202ENST00000422508 A0A1B0GVY2 172 aa4.52□□□□□ -1.69
CD109-202ENST00000422508 CFAP47Q6ZTR5 3102 aa4.48□□□□□ -1.69
CD109-202ENST00000422508 SPENQ96T58 3664 aaKnown RBP4.48□□□□□ -1.69
CD109-202ENST00000422508 BRCA2P51587 3418 aa4.48□□□□□ -1.69
CD109-202ENST00000422508 CDH23Q9H251 3354 aa4.47□□□□□ -1.69
CD109-202ENST00000422508 SPEGQ15772 3267 aa4.47□□□□□ -1.69
CD109-202ENST00000422508 VCANP13611 3396 aa4.46□□□□□ -1.7
CD109-202ENST00000422508 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
CD109-202ENST00000422508 ZFHX4Q86UP3 3567 aa4.39□□□□□ -1.71
CD109-202ENST00000422508 CMYA5Q8N3K9 4069 aa4.38□□□□□ -1.71
CD109-202ENST00000422508 WDFY3Q8IZQ1 3526 aa4.33□□□□□ -1.72
CD109-202ENST00000422508 VPS13CQ709C8 3753 aa4.32□□□□□ -1.72
CD109-202ENST00000422508 TRRAPQ9Y4A5 3859 aa4.32□□□□□ -1.72
CD109-202ENST00000422508 ALMS1Q8TCU4 4167 aa4.32□□□□□ -1.72
CD109-202ENST00000422508 DMDP11532 3685 aa4.31□□□□□ -1.72
CD109-202ENST00000422508 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
CD109-202ENST00000422508 LAMA5O15230 3695 aa4.3□□□□□ -1.72
CD109-202ENST00000422508 OTOGQ6ZRI0 2925 aa4.3□□□□□ -1.72
CD109-202ENST00000422508 EYSQ5T1H1 3165 aa4.29□□□□□ -1.72
CD109-202ENST00000422508 FBN1P35555 2871 aaKnown RBP4.28□□□□□ -1.72
CD109-202ENST00000422508 SMG1Q96Q15 3661 aaKnown RBP4.27□□□□□ -1.73
CD109-202ENST00000422508 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
CD109-202ENST00000422508 MYO15AQ9UKN7 3530 aa4.24□□□□□ -1.73
CD109-202ENST00000422508 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
CD109-202ENST00000422508 SZT2Q5T011 3432 aa4.2□□□□□ -1.74
CD109-202ENST00000422508 ASPMQ8IZT6 3477 aa4.2□□□□□ -1.74
CD109-202ENST00000422508 DNAH3Q8TD57 4116 aa4.19□□□□□ -1.74
CD109-202ENST00000422508 LOC400499M0QZD8 3231 aa4.19□□□□□ -1.74
CD109-202ENST00000422508 DNAH7Q8WXX0 4024 aa4.17□□□□□ -1.74
CD109-202ENST00000422508 RELNP78509 3460 aa4.16□□□□□ -1.74
CD109-202ENST00000422508 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
CD109-202ENST00000422508 BSNQ9UPA5 3926 aa4.14□□□□□ -1.75
CD109-202ENST00000422508 LYSTQ99698 3801 aa4.1□□□□□ -1.75
CD109-202ENST00000422508 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
CD109-202ENST00000422508 CSMD1Q96PZ7 3565 aa4.05□□□□□ -1.76
CD109-202ENST00000422508 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
CD109-202ENST00000422508 DCHS1Q96JQ0 3298 aa4.01□□□□□ -1.77
CD109-202ENST00000422508 HECTD4Q9Y4D8 3996 aa4□□□□□ -1.77
CD109-202ENST00000422508 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
CD109-202ENST00000422508 ZNF469Q96JG9 3925 aaPredicted RBP3.95□□□□□ -1.78
CD109-202ENST00000422508 ANK2Q01484 3957 aa3.95□□□□□ -1.78
CD109-202ENST00000422508 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
CD109-202ENST00000422508 CSMD3Q7Z407 3707 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms