RNA–Protein interactions for RNA: ENST00000406875.7

HIPK2-202, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIPK2, Length 15,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-202ENST00000406875 LAMA3Q16787 3333 aa3.86□□□□□ -1.79
HIPK2-202ENST00000406875 FLNAP21333 2647 aaKnown RBP3.86□□□□□ -1.79
HIPK2-202ENST00000406875 CHD9Q3L8U1 2897 aa3.83□□□□□ -1.8
HIPK2-202ENST00000406875 CDH23Q9H251 3354 aa3.83□□□□□ -1.8
HIPK2-202ENST00000406875 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
HIPK2-202ENST00000406875 TNP1P09430 55 aa3.81□□□□□ -1.8
HIPK2-202ENST00000406875 INE1O15225 51 aa3.79□□□□□ -1.8
HIPK2-202ENST00000406875 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
HIPK2-202ENST00000406875 KMT2BQ9UMN6 2715 aaPredicted RBP3.77□□□□□ -1.81
HIPK2-202ENST00000406875 KRTAP10-1P60331 282 aa3.77□□□□□ -1.81
HIPK2-202ENST00000406875 ITPR1Q14643 2758 aa3.77□□□□□ -1.81
HIPK2-202ENST00000406875 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.81
HIPK2-202ENST00000406875 TACC2O95359 2948 aa3.75□□□□□ -1.81
HIPK2-202ENST00000406875 PDZD2O15018 2839 aa3.75□□□□□ -1.81
HIPK2-202ENST00000406875 CELSR1Q9NYQ6 3014 aa3.74□□□□□ -1.81
HIPK2-202ENST00000406875 ITPR2Q14571 2701 aa3.72□□□□□ -1.81
HIPK2-202ENST00000406875 NBEAL2Q6ZNJ1 2754 aa3.72□□□□□ -1.81
HIPK2-202ENST00000406875 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
HIPK2-202ENST00000406875 Q6ZRN7 208 aaPredicted RBP3.72□□□□□ -1.81
HIPK2-202ENST00000406875 SZT2Q5T011 3432 aa3.71□□□□□ -1.82
HIPK2-202ENST00000406875 SPEGQ15772 3267 aa3.69□□□□□ -1.82
HIPK2-202ENST00000406875 VCANP13611 3396 aa3.69□□□□□ -1.82
HIPK2-202ENST00000406875 EYSQ5T1H1 3165 aa3.69□□□□□ -1.82
HIPK2-202ENST00000406875 KRTAP10-2P60368 255 aa3.68□□□□□ -1.82
HIPK2-202ENST00000406875 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
HIPK2-202ENST00000406875 TENM3Q9P273 2699 aa3.67□□□□□ -1.82
HIPK2-202ENST00000406875 APCP25054 2843 aa3.67□□□□□ -1.82
HIPK2-202ENST00000406875 NF1P21359 2839 aa3.67□□□□□ -1.82
HIPK2-202ENST00000406875 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
HIPK2-202ENST00000406875 KRTAP10-8P60410 259 aa3.65□□□□□ -1.82
HIPK2-202ENST00000406875 DNAH14Q0VDD8 3507 aa3.64□□□□□ -1.83
HIPK2-202ENST00000406875 HIVEP1P15822 2718 aa3.64□□□□□ -1.83
HIPK2-202ENST00000406875 KRTAP13-1Q8IUC0 172 aa3.63□□□□□ -1.83
HIPK2-202ENST00000406875 LRBAP50851 2863 aa3.62□□□□□ -1.83
HIPK2-202ENST00000406875 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
HIPK2-202ENST00000406875 H0YAA0 97 aa3.57□□□□□ -1.84
HIPK2-202ENST00000406875 BRCA2P51587 3418 aa3.56□□□□□ -1.84
HIPK2-202ENST00000406875 TENM4Q6N022 2769 aa3.54□□□□□ -1.84
HIPK2-202ENST00000406875 LOC400499M0QZD8 3231 aa3.54□□□□□ -1.84
HIPK2-202ENST00000406875 ZANQ9Y493 2812 aa3.5□□□□□ -1.85
HIPK2-202ENST00000406875 DCHS1Q96JQ0 3298 aa3.48□□□□□ -1.85
HIPK2-202ENST00000406875 TENM1Q9UKZ4 2725 aa3.45□□□□□ -1.86
HIPK2-202ENST00000406875 XP32Q5T750 250 aa3.45□□□□□ -1.86
HIPK2-202ENST00000406875 KRTAP13-2Q52LG2 175 aa3.44□□□□□ -1.86
HIPK2-202ENST00000406875 KRTAP10-10P60014 251 aa3.44□□□□□ -1.86
HIPK2-202ENST00000406875 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
HIPK2-202ENST00000406875 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
HIPK2-202ENST00000406875 MXRA5Q9NR99 2828 aa3.4□□□□□ -1.87
HIPK2-202ENST00000406875 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
HIPK2-202ENST00000406875 PKD1L1Q8TDX9 2849 aa3.4□□□□□ -1.87
HIPK2-202ENST00000406875 FBN2P35556 2912 aa3.39□□□□□ -1.87
HIPK2-202ENST00000406875 COL7A1Q02388 2944 aa3.39□□□□□ -1.87
HIPK2-202ENST00000406875 SPTBN5Q9NRC6 3674 aaKnown RBP3.37□□□□□ -1.87
HIPK2-202ENST00000406875 SRRM2Q9UQ35 2752 aaKnown RBP3.37□□□□□ -1.87
HIPK2-202ENST00000406875 ZFHX4Q86UP3 3567 aa3.36□□□□□ -1.87
HIPK2-202ENST00000406875 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
HIPK2-202ENST00000406875 ASPMQ8IZT6 3477 aa3.35□□□□□ -1.87
HIPK2-202ENST00000406875 HUWE1Q7Z6Z7 4374 aaKnown RBP3.32□□□□□ -1.88
HIPK2-202ENST00000406875 TGP01266 2768 aa3.32□□□□□ -1.88
HIPK2-202ENST00000406875 MYO15AQ9UKN7 3530 aa3.31□□□□□ -1.88
HIPK2-202ENST00000406875 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
HIPK2-202ENST00000406875 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
HIPK2-202ENST00000406875 USP34Q70CQ2 3546 aa3.3□□□□□ -1.88
HIPK2-202ENST00000406875 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
HIPK2-202ENST00000406875 VWFP04275 2813 aa3.28□□□□□ -1.88
HIPK2-202ENST00000406875 HRNRQ86YZ3 2850 aaPredicted RBP3.27□□□□□ -1.89
HIPK2-202ENST00000406875 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
HIPK2-202ENST00000406875 AKAP9Q99996 3911 aa3.27□□□□□ -1.89
HIPK2-202ENST00000406875 DNAH1Q9P2D7 4330 aa3.26□□□□□ -1.89
HIPK2-202ENST00000406875 ZFHX3Q15911 3703 aa3.26□□□□□ -1.89
HIPK2-202ENST00000406875 DNAH2Q9P225 4427 aa3.26□□□□□ -1.89
HIPK2-202ENST00000406875 MEGF8Q7Z7M0 2845 aa3.25□□□□□ -1.89
HIPK2-202ENST00000406875 KRTAP10-6P60371 365 aaPredicted RBP3.24□□□□□ -1.89
HIPK2-202ENST00000406875 OTOGQ6ZRI0 2925 aa3.23□□□□□ -1.89
HIPK2-202ENST00000406875 DNAH11Q96DT5 4516 aa3.22□□□□□ -1.89
HIPK2-202ENST00000406875 RELNP78509 3460 aa3.18□□□□□ -1.9
HIPK2-202ENST00000406875 DNAH10Q8IVF4 4471 aa3.18□□□□□ -1.9
HIPK2-202ENST00000406875 NBPF19A0A087WUL8 3843 aa3.18□□□□□ -1.9
HIPK2-202ENST00000406875 FBN1P35555 2871 aaKnown RBP3.18□□□□□ -1.9
HIPK2-202ENST00000406875 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
HIPK2-202ENST00000406875 WDFY3Q8IZQ1 3526 aa3.17□□□□□ -1.9
HIPK2-202ENST00000406875 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
HIPK2-202ENST00000406875 PLECQ15149 4684 aaKnown RBP3.14□□□□□ -1.91
HIPK2-202ENST00000406875 FBN3Q75N90 2809 aa3.13□□□□□ -1.91
HIPK2-202ENST00000406875 MUC3AQ02505 3323 aa3.13□□□□□ -1.91
HIPK2-202ENST00000406875 TRRAPQ9Y4A5 3859 aa3.09□□□□□ -1.91
HIPK2-202ENST00000406875 MT3P25713 68 aa3.09□□□□□ -1.92
HIPK2-202ENST00000406875 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.92
HIPK2-202ENST00000406875 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
HIPK2-202ENST00000406875 LAMA5O15230 3695 aa3.05□□□□□ -1.92
HIPK2-202ENST00000406875 CUBNO60494 3623 aa3.05□□□□□ -1.92
HIPK2-202ENST00000406875 DNAH17Q9UFH2 4485 aa3.03□□□□□ -1.92
HIPK2-202ENST00000406875 SPENQ96T58 3664 aaKnown RBP3.01□□□□□ -1.93
HIPK2-202ENST00000406875 VPS13BQ7Z7G8 4022 aa2.99□□□□□ -1.93
HIPK2-202ENST00000406875 ANK3Q12955 4377 aaKnown RBP2.98□□□□□ -1.93
HIPK2-202ENST00000406875 CSMD1Q96PZ7 3565 aa2.98□□□□□ -1.93
HIPK2-202ENST00000406875 SMG1Q96Q15 3661 aaKnown RBP2.98□□□□□ -1.93
HIPK2-202ENST00000406875 ANK2Q01484 3957 aa2.97□□□□□ -1.93
HIPK2-202ENST00000406875 APOBP04114 4563 aaKnown RBP2.95□□□□□ -1.94
HIPK2-202ENST00000406875 KRTAP10-12P60413 245 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms