RNA–Protein interactions for RNA: ENST00000406875.7

HIPK2-202, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIPK2, Length 15,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-202ENST00000406875 MYT1Q01538 1121 aa12.11□□□□□ -0.47
HIPK2-202ENST00000406875 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
HIPK2-202ENST00000406875 TTBK1Q5TCY1 1321 aaPredicted RBP11.48□□□□□ -0.57
HIPK2-202ENST00000406875 ERICH6Q7L0X2 663 aa11.03□□□□□ -0.64
HIPK2-202ENST00000406875 FAM9AQ8IZU1 332 aaPredicted RBP10.81□□□□□ -0.68
HIPK2-202ENST00000406875 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
HIPK2-202ENST00000406875 DCAF8L2P0C7V8 631 aa10.55□□□□□ -0.72
HIPK2-202ENST00000406875 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
HIPK2-202ENST00000406875 APLP2Q06481 763 aa10.15□□□□□ -0.78
HIPK2-202ENST00000406875 DAXXQ9UER7 740 aaPredicted RBP10.13□□□□□ -0.79
HIPK2-202ENST00000406875 CENPBP07199 599 aaPredicted RBP10.11□□□□□ -0.79
HIPK2-202ENST00000406875 YTHDC1Q96MU7 727 aaKnown RBP10.08□□□□□ -0.8
HIPK2-202ENST00000406875 NISCHQ9Y2I1 1504 aa10.01□□□□□ -0.81
HIPK2-202ENST00000406875 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.82
HIPK2-202ENST00000406875 CCER1Q8TC90 406 aaPredicted RBP9.94□□□□□ -0.82
HIPK2-202ENST00000406875 MYT1LQ9UL68 1186 aa9.86□□□□□ -0.83
HIPK2-202ENST00000406875 EIF5BO60841 1220 aaKnown RBP9.86□□□□□ -0.83
HIPK2-202ENST00000406875 GLIPR1L2Q4G1C9 344 aa9.84□□□□□ -0.83
HIPK2-202ENST00000406875 ZEB1P37275 1124 aaPredicted RBP9.8□□□□□ -0.84
HIPK2-202ENST00000406875 SUPT5HO00267 1087 aaKnown RBP9.65□□□□□ -0.86
HIPK2-202ENST00000406875 NEFLP07196 543 aa9.61□□□□□ -0.87
HIPK2-202ENST00000406875 ARXQ96QS3 562 aa9.6□□□□□ -0.87
HIPK2-202ENST00000406875 NCBP3Q53F19 620 aaKnown RBP9.57□□□□□ -0.88
HIPK2-202ENST00000406875 PRKCSHP14314 528 aaPredicted RBP9.55□□□□□ -0.88
HIPK2-202ENST00000406875 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
HIPK2-202ENST00000406875 BCL11AQ9H165 835 aa9.54□□□□□ -0.88
HIPK2-202ENST00000406875 HRCP23327 699 aa9.49□□□□□ -0.89
HIPK2-202ENST00000406875 ZNF326Q5BKZ1 582 aaKnown RBP9.49□□□□□ -0.89
HIPK2-202ENST00000406875 HMGB1P09429 215 aaKnown RBP9.44□□□□□ -0.9
HIPK2-202ENST00000406875 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
HIPK2-202ENST00000406875 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
HIPK2-202ENST00000406875 CLSPNQ9HAW4 1339 aa9.42□□□□□ -0.9
HIPK2-202ENST00000406875 CDK11AQ9UQ88 783 aaPredicted RBP9.42□□□□□ -0.9
HIPK2-202ENST00000406875 TRIM41Q8WV44 630 aa9.39□□□□□ -0.91
HIPK2-202ENST00000406875 POLR3GLQ9BT43 218 aa9.39□□□□□ -0.91
HIPK2-202ENST00000406875 NEFMP07197 916 aa9.37□□□□□ -0.91
HIPK2-202ENST00000406875 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
HIPK2-202ENST00000406875 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
HIPK2-202ENST00000406875 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
HIPK2-202ENST00000406875 UBTFP17480 764 aaKnown RBP9.33□□□□□ -0.92
HIPK2-202ENST00000406875 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
HIPK2-202ENST00000406875 ANP32EQ9BTT0 268 aa9.26□□□□□ -0.93
HIPK2-202ENST00000406875 PTMSP20962 102 aa9.24□□□□□ -0.93
HIPK2-202ENST00000406875 PODXL2Q9NZ53 605 aa9.22□□□□□ -0.93
HIPK2-202ENST00000406875 CDK11BP21127 795 aaKnown RBP9.21□□□□□ -0.94
HIPK2-202ENST00000406875 BCANQ96GW7 911 aa9.17□□□□□ -0.94
HIPK2-202ENST00000406875 ZBTB47Q9UFB7 747 aaPredicted RBP9.16□□□□□ -0.94
HIPK2-202ENST00000406875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.13□□□□□ -0.95
HIPK2-202ENST00000406875 HNRNPUL2Q1KMD3 747 aaKnown RBP9.13□□□□□ -0.95
HIPK2-202ENST00000406875 RTN4Q9NQC3 1192 aaKnown RBP9.13□□□□□ -0.95
HIPK2-202ENST00000406875 TNNT2P45379 298 aaPredicted RBP9.09□□□□□ -0.95
HIPK2-202ENST00000406875 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
HIPK2-202ENST00000406875 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
HIPK2-202ENST00000406875 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
HIPK2-202ENST00000406875 PKNOX2Q96KN3 472 aa9.07□□□□□ -0.96
HIPK2-202ENST00000406875 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
HIPK2-202ENST00000406875 NPM2Q86SE8 214 aaKnown RBP9.06□□□□□ -0.96
HIPK2-202ENST00000406875 GTF3C3Q9Y5Q9 886 aa9.05□□□□□ -0.96
HIPK2-202ENST00000406875 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
HIPK2-202ENST00000406875 FBXO3Q9UK99 471 aa9.04□□□□□ -0.96
HIPK2-202ENST00000406875 ESF1Q9H501 851 aaKnown RBP9.04□□□□□ -0.96
HIPK2-202ENST00000406875 ZNF316A6NFI3 1004 aaPredicted RBP9.04□□□□□ -0.96
HIPK2-202ENST00000406875 ANP32BQ92688 251 aaKnown RBP9.03□□□□□ -0.96
HIPK2-202ENST00000406875 TRIM26Q12899 539 aaPredicted RBP9.03□□□□□ -0.96
HIPK2-202ENST00000406875 PCGF6Q9BYE7 350 aa9.01□□□□□ -0.97
HIPK2-202ENST00000406875 PDE4CQ08493 712 aa8.98□□□□□ -0.97
HIPK2-202ENST00000406875 HSP90B1P14625 803 aaKnown RBP8.98□□□□□ -0.97
HIPK2-202ENST00000406875 TRIM44Q96DX7 344 aaPredicted RBP8.98□□□□□ -0.97
HIPK2-202ENST00000406875 TAF7LQ5H9L4 462 aa8.95□□□□□ -0.98
HIPK2-202ENST00000406875 PDIA4P13667 645 aaKnown RBP8.95□□□□□ -0.98
HIPK2-202ENST00000406875 ANO8Q9HCE9 1232 aaPredicted RBP8.94□□□□□ -0.98
HIPK2-202ENST00000406875 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
HIPK2-202ENST00000406875 CNGB1Q14028 1251 aaPredicted RBP8.92□□□□□ -0.98
HIPK2-202ENST00000406875 NAP1L5Q96NT1 182 aaPredicted RBP8.92□□□□□ -0.98
HIPK2-202ENST00000406875 ANP32AP39687 249 aaKnown RBP8.92□□□□□ -0.98
HIPK2-202ENST00000406875 BRD2P25440 801 aaKnown RBP8.91□□□□□ -0.98
HIPK2-202ENST00000406875 SCAF1Q9H7N4 1312 aaKnown RBP8.9□□□□□ -0.98
HIPK2-202ENST00000406875 LAS1LQ9Y4W2 734 aaKnown RBP8.89□□□□□ -0.99
HIPK2-202ENST00000406875 HDGFP51858 240 aaKnown RBP8.87□□□□□ -0.99
HIPK2-202ENST00000406875 CHMP4AQ9BY43 222 aa8.85□□□□□ -0.99
HIPK2-202ENST00000406875 SLC4A1APQ9BWU0 796 aaKnown RBP8.85□□□□□ -0.99
HIPK2-202ENST00000406875 AEBP2Q6ZN18 517 aaPredicted RBP8.85□□□□□ -0.99
HIPK2-202ENST00000406875 ARID3AQ99856 593 aa8.85□□□□□ -0.99
HIPK2-202ENST00000406875 TPRNQ4KMQ1 711 aa8.82□□□□□ -1
HIPK2-202ENST00000406875 CHMP4BQ9H444 224 aaKnown RBP8.8□□□□□ -1
HIPK2-202ENST00000406875 CSRNP3Q8WYN3 585 aa8.8□□□□□ -1
HIPK2-202ENST00000406875 CDCA8Q53HL2 280 aa8.8□□□□□ -1
HIPK2-202ENST00000406875 TRIM52Q96A61 297 aa8.8□□□□□ -1
HIPK2-202ENST00000406875 PTMAP06454 111 aaKnown RBP8.8□□□□□ -1
HIPK2-202ENST00000406875 BCCIPQ9P287 314 aaKnown RBP eCLIP8.8□□□□□ -1
HIPK2-202ENST00000406875 ANP32CO43423 234 aa8.8□□□□□ -1
HIPK2-202ENST00000406875 CALRP27797 417 aaKnown RBP8.79□□□□□ -1
HIPK2-202ENST00000406875 STAG3Q9UJ98 1225 aa8.79□□□□□ -1
HIPK2-202ENST00000406875 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.78□□□□□ -1
HIPK2-202ENST00000406875 TAOK2Q9UL54 1235 aa8.78□□□□□ -1
HIPK2-202ENST00000406875 PLPPR3Q6T4P5 718 aa8.77□□□□□ -1
HIPK2-202ENST00000406875 EIF4G2P78344 907 aaKnown RBP eCLIP8.76□□□□□ -1.016e-7■■■■■ 37.2
HIPK2-202ENST00000406875 UPF2Q9HAU5 1272 aaKnown RBP8.76□□□□□ -1.01
HIPK2-202ENST00000406875 TIMELESSQ9UNS1 1208 aa8.76□□□□□ -1.01
HIPK2-202ENST00000406875 CFAP44Q96MT7 982 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms