RNA–Protein interactions for RNA: ENST00000394232.5

SV2B-202, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SV2B, Length 11,279 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-202ENST00000394232 KRTAP10-1P60331 282 aa3.69□□□□□ -1.82
SV2B-202ENST00000394232 Q5VSD8 79 aa3.68□□□□□ -1.82
SV2B-202ENST00000394232 A6NN06 94 aa3.68□□□□□ -1.82
SV2B-202ENST00000394232 ADGRG4Q8IZF6 3080 aa3.68□□□□□ -1.82
SV2B-202ENST00000394232 LAMA3Q16787 3333 aa3.67□□□□□ -1.82
SV2B-202ENST00000394232 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
SV2B-202ENST00000394232 BOD1L1Q8NFC6 3051 aa3.66□□□□□ -1.82
SV2B-202ENST00000394232 DMXL1Q9Y485 3027 aa3.66□□□□□ -1.82
SV2B-202ENST00000394232 ATMQ13315 3056 aa3.66□□□□□ -1.82
SV2B-202ENST00000394232 MXRA5Q9NR99 2828 aa3.66□□□□□ -1.82
SV2B-202ENST00000394232 KRTAP10-2P60368 255 aa3.64□□□□□ -1.83
SV2B-202ENST00000394232 HRNRQ86YZ3 2850 aaPredicted RBP3.64□□□□□ -1.83
SV2B-202ENST00000394232 CELSR1Q9NYQ6 3014 aa3.64□□□□□ -1.83
SV2B-202ENST00000394232 LCE6AA0A183 80 aa3.63□□□□□ -1.83
SV2B-202ENST00000394232 A0A087X002 238 aa3.63□□□□□ -1.83
SV2B-202ENST00000394232 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
SV2B-202ENST00000394232 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
SV2B-202ENST00000394232 XIRP2A4UGR9 3374 aa3.61□□□□□ -1.83
SV2B-202ENST00000394232 A8MU10 97 aa3.6□□□□□ -1.83
SV2B-202ENST00000394232 COL6A3P12111 3177 aa3.6□□□□□ -1.83
SV2B-202ENST00000394232 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.83
SV2B-202ENST00000394232 TENM2Q9NT68 2774 aa3.59□□□□□ -1.83
SV2B-202ENST00000394232 A8MUU9 505 aa3.59□□□□□ -1.83
SV2B-202ENST00000394232 C20orf166-AS1Q96NR2 134 aa3.59□□□□□ -1.83
SV2B-202ENST00000394232 CELSR3Q9NYQ7 3312 aa3.58□□□□□ -1.84
SV2B-202ENST00000394232 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
SV2B-202ENST00000394232 EYSQ5T1H1 3165 aa3.57□□□□□ -1.84
SV2B-202ENST00000394232 CDH23Q9H251 3354 aa3.56□□□□□ -1.84
SV2B-202ENST00000394232 USP34Q70CQ2 3546 aa3.56□□□□□ -1.84
SV2B-202ENST00000394232 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
SV2B-202ENST00000394232 CFAP47Q6ZTR5 3102 aa3.54□□□□□ -1.84
SV2B-202ENST00000394232 SZT2Q5T011 3432 aa3.53□□□□□ -1.84
SV2B-202ENST00000394232 SPTBN5Q9NRC6 3674 aaKnown RBP3.53□□□□□ -1.84
SV2B-202ENST00000394232 DNAH14Q0VDD8 3507 aa3.53□□□□□ -1.84
SV2B-202ENST00000394232 UNC80Q8N2C7 3258 aa3.52□□□□□ -1.85
SV2B-202ENST00000394232 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
SV2B-202ENST00000394232 KRTAP13-2Q52LG2 175 aa3.51□□□□□ -1.85
SV2B-202ENST00000394232 TNP1P09430 55 aa3.5□□□□□ -1.85
SV2B-202ENST00000394232 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
SV2B-202ENST00000394232 Q6ZRN7 208 aaPredicted RBP3.5□□□□□ -1.85
SV2B-202ENST00000394232 KRTAP7-1Q8IUC3 87 aa3.49□□□□□ -1.85
SV2B-202ENST00000394232 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
SV2B-202ENST00000394232 VCANP13611 3396 aa3.48□□□□□ -1.85
SV2B-202ENST00000394232 MEGF8Q7Z7M0 2845 aa3.44□□□□□ -1.86
SV2B-202ENST00000394232 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
SV2B-202ENST00000394232 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
SV2B-202ENST00000394232 H0YAA0 97 aa3.4□□□□□ -1.87
SV2B-202ENST00000394232 P0C880 135 aa3.4□□□□□ -1.87
SV2B-202ENST00000394232 SPEGQ15772 3267 aa3.39□□□□□ -1.87
SV2B-202ENST00000394232 MYO15AQ9UKN7 3530 aa3.39□□□□□ -1.87
SV2B-202ENST00000394232 KRTAP10-8P60410 259 aa3.34□□□□□ -1.87
SV2B-202ENST00000394232 DMDP11532 3685 aa3.33□□□□□ -1.88
SV2B-202ENST00000394232 XP32Q5T750 250 aa3.31□□□□□ -1.88
SV2B-202ENST00000394232 WDFY3Q8IZQ1 3526 aa3.31□□□□□ -1.88
SV2B-202ENST00000394232 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
SV2B-202ENST00000394232 MUC3AQ02505 3323 aa3.27□□□□□ -1.89
SV2B-202ENST00000394232 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
SV2B-202ENST00000394232 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
SV2B-202ENST00000394232 OTOGQ6ZRI0 2925 aa3.25□□□□□ -1.89
SV2B-202ENST00000394232 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
SV2B-202ENST00000394232 ZFHX3Q15911 3703 aa3.23□□□□□ -1.89
SV2B-202ENST00000394232 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
SV2B-202ENST00000394232 ZFHX4Q86UP3 3567 aa3.22□□□□□ -1.89
SV2B-202ENST00000394232 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
SV2B-202ENST00000394232 KRTAP21-3Q3LHN1 58 aa3.2□□□□□ -1.9
SV2B-202ENST00000394232 LAMA5O15230 3695 aa3.2□□□□□ -1.9
SV2B-202ENST00000394232 NBPF19A0A087WUL8 3843 aa3.19□□□□□ -1.9
SV2B-202ENST00000394232 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
SV2B-202ENST00000394232 LOC400499M0QZD8 3231 aa3.18□□□□□ -1.9
SV2B-202ENST00000394232 DCHS1Q96JQ0 3298 aa3.16□□□□□ -1.9
SV2B-202ENST00000394232 KRTAP12-2P59991 146 aa3.15□□□□□ -1.9
SV2B-202ENST00000394232 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
SV2B-202ENST00000394232 BSNQ9UPA5 3926 aa3.1□□□□□ -1.91
SV2B-202ENST00000394232 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
SV2B-202ENST00000394232 SMG1Q96Q15 3661 aaKnown RBP3.09□□□□□ -1.92
SV2B-202ENST00000394232 TRRAPQ9Y4A5 3859 aa3.08□□□□□ -1.92
SV2B-202ENST00000394232 SPENQ96T58 3664 aaKnown RBP3.05□□□□□ -1.92
SV2B-202ENST00000394232 KRTAP15-1Q3LI76 137 aa3.03□□□□□ -1.92
SV2B-202ENST00000394232 RELNP78509 3460 aa3.01□□□□□ -1.93
SV2B-202ENST00000394232 VPS13CQ709C8 3753 aa3□□□□□ -1.93
SV2B-202ENST00000394232 KRTAP3-1Q9BYR8 98 aa2.98□□□□□ -1.93
SV2B-202ENST00000394232 INE1O15225 51 aa2.98□□□□□ -1.93
SV2B-202ENST00000394232 AKAP9Q99996 3911 aa2.97□□□□□ -1.93
SV2B-202ENST00000394232 ALMS1Q8TCU4 4167 aa2.96□□□□□ -1.94
SV2B-202ENST00000394232 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
SV2B-202ENST00000394232 CSMD1Q96PZ7 3565 aa2.95□□□□□ -1.94
SV2B-202ENST00000394232 CSMD2Q7Z408 3487 aa2.93□□□□□ -1.94
SV2B-202ENST00000394232 SVEP1Q4LDE5 3571 aa2.9□□□□□ -1.95
SV2B-202ENST00000394232 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
SV2B-202ENST00000394232 KRTAP3-2Q9BYR7 98 aa2.84□□□□□ -1.96
SV2B-202ENST00000394232 ZNF469Q96JG9 3925 aaPredicted RBP2.84□□□□□ -1.96
SV2B-202ENST00000394232 CUBNO60494 3623 aa2.83□□□□□ -1.96
SV2B-202ENST00000394232 CSMD3Q7Z407 3707 aa2.82□□□□□ -1.96
SV2B-202ENST00000394232 KRTAP3-3Q9BYR6 98 aa2.8□□□□□ -1.96
SV2B-202ENST00000394232 KRTAP23-1A1A580 65 aa2.8□□□□□ -1.96
SV2B-202ENST00000394232 KRTAP12-3P60328 96 aa2.78□□□□□ -1.97
SV2B-202ENST00000394232 CMYA5Q8N3K9 4069 aa2.77□□□□□ -1.97
SV2B-202ENST00000394232 ANK3Q12955 4377 aaKnown RBP2.77□□□□□ -1.97
SV2B-202ENST00000394232 LYSTQ99698 3801 aa2.76□□□□□ -1.97
SV2B-202ENST00000394232 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms