RNA–Protein interactions for RNA: ENST00000394232.5

SV2B-202, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SV2B, Length 11,279 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-202ENST00000394232 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
SV2B-202ENST00000394232 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
SV2B-202ENST00000394232 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
SV2B-202ENST00000394232 SHROOM4Q9ULL8 1493 aa9.82□□□□□ -0.84
SV2B-202ENST00000394232 NISCHQ9Y2I1 1504 aa9.81□□□□□ -0.84
SV2B-202ENST00000394232 EHMT2Q96KQ7 1210 aa9.8□□□□□ -0.84
SV2B-202ENST00000394232 APLP2Q06481 763 aa9.79□□□□□ -0.84
SV2B-202ENST00000394232 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
SV2B-202ENST00000394232 CENPBP07199 599 aaPredicted RBP9.72□□□□□ -0.85
SV2B-202ENST00000394232 CCER1Q8TC90 406 aaPredicted RBP9.72□□□□□ -0.85
SV2B-202ENST00000394232 MYT1Q01538 1121 aa9.71□□□□□ -0.86
SV2B-202ENST00000394232 PCGF6Q9BYE7 350 aa9.65□□□□□ -0.86
SV2B-202ENST00000394232 ZEB1P37275 1124 aaPredicted RBP9.63□□□□□ -0.87
SV2B-202ENST00000394232 FAM9AQ8IZU1 332 aaPredicted RBP9.57□□□□□ -0.88
SV2B-202ENST00000394232 TTBK1Q5TCY1 1321 aaPredicted RBP9.54□□□□□ -0.88
SV2B-202ENST00000394232 NEFLP07196 543 aa9.54□□□□□ -0.88
SV2B-202ENST00000394232 YTHDC1Q96MU7 727 aaKnown RBP9.38□□□□□ -0.91
SV2B-202ENST00000394232 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
SV2B-202ENST00000394232 TRIM41Q8WV44 630 aa9.34□□□□□ -0.91
SV2B-202ENST00000394232 DAXXQ9UER7 740 aaPredicted RBP9.31□□□□□ -0.92
SV2B-202ENST00000394232 ATP1B4Q9UN42 357 aaPredicted RBP9.3□□□□□ -0.92
SV2B-202ENST00000394232 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
SV2B-202ENST00000394232 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
SV2B-202ENST00000394232 HRCP23327 699 aa9.16□□□□□ -0.94
SV2B-202ENST00000394232 RTL5Q5HYW3 569 aaPredicted RBP9.12□□□□□ -0.95
SV2B-202ENST00000394232 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
SV2B-202ENST00000394232 ZNF316A6NFI3 1004 aaPredicted RBP9.08□□□□□ -0.96
SV2B-202ENST00000394232 POLR3GLQ9BT43 218 aa9.07□□□□□ -0.96
SV2B-202ENST00000394232 ITGAEP38570 1179 aa9.01□□□□□ -0.97
SV2B-202ENST00000394232 CLSPNQ9HAW4 1339 aa8.99□□□□□ -0.97
SV2B-202ENST00000394232 DIEXFQ68CQ4 756 aaKnown RBP8.97□□□□□ -0.97
SV2B-202ENST00000394232 HNRNPUL2Q1KMD3 747 aaKnown RBP8.97□□□□□ -0.97
SV2B-202ENST00000394232 MYT1LQ9UL68 1186 aa8.94□□□□□ -0.98
SV2B-202ENST00000394232 CNGB1Q14028 1251 aaPredicted RBP8.94□□□□□ -0.98
SV2B-202ENST00000394232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.92□□□□□ -0.98
SV2B-202ENST00000394232 LOC105371045A0A1W2PR82 267 aa8.9□□□□□ -0.99
SV2B-202ENST00000394232 SLC4A1APQ9BWU0 796 aaKnown RBP8.89□□□□□ -0.99
SV2B-202ENST00000394232 CDK11AQ9UQ88 783 aaPredicted RBP8.86□□□□□ -0.99
SV2B-202ENST00000394232 CHIC1Q5VXU3 224 aa8.85□□□□□ -0.99
SV2B-202ENST00000394232 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
SV2B-202ENST00000394232 BCANQ96GW7 911 aa8.82□□□□□ -1
SV2B-202ENST00000394232 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
SV2B-202ENST00000394232 ANP32CO43423 234 aa8.8□□□□□ -1
SV2B-202ENST00000394232 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
SV2B-202ENST00000394232 ANP32AP39687 249 aaKnown RBP8.76□□□□□ -1.01
SV2B-202ENST00000394232 NEUROD1Q13562 356 aa8.74□□□□□ -1.01
SV2B-202ENST00000394232 CANXP27824 592 aaKnown RBP8.73□□□□□ -1.01
SV2B-202ENST00000394232 TRIM52Q96A61 297 aa8.73□□□□□ -1.01
SV2B-202ENST00000394232 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
SV2B-202ENST00000394232 ANP32BQ92688 251 aaKnown RBP8.68□□□□□ -1.02
SV2B-202ENST00000394232 ZNF326Q5BKZ1 582 aaKnown RBP8.68□□□□□ -1.02
SV2B-202ENST00000394232 EIF5BO60841 1220 aaKnown RBP8.67□□□□□ -1.02
SV2B-202ENST00000394232 GLIPR1L2Q4G1C9 344 aa8.66□□□□□ -1.02
SV2B-202ENST00000394232 NEFMP07197 916 aa8.63□□□□□ -1.03
SV2B-202ENST00000394232 NPM2Q86SE8 214 aaKnown RBP8.63□□□□□ -1.03
SV2B-202ENST00000394232 BCL11AQ9H165 835 aa8.63□□□□□ -1.03
SV2B-202ENST00000394232 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
SV2B-202ENST00000394232 SLC24A1O60721 1099 aa8.59□□□□□ -1.03
SV2B-202ENST00000394232 UPF2Q9HAU5 1272 aaKnown RBP8.58□□□□□ -1.04
SV2B-202ENST00000394232 FKBP8Q14318 412 aa8.54□□□□□ -1.04
SV2B-202ENST00000394232 NBR1Q14596 966 aa8.51□□□□□ -1.05
SV2B-202ENST00000394232 TONSLQ96HA7 1378 aa8.49□□□□□ -1.05
SV2B-202ENST00000394232 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
SV2B-202ENST00000394232 CCDC136Q96JN2 1154 aa8.48□□□□□ -1.05
SV2B-202ENST00000394232 DCAF1Q9Y4B6 1507 aa8.48□□□□□ -1.05
SV2B-202ENST00000394232 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
SV2B-202ENST00000394232 ARXQ96QS3 562 aa8.43□□□□□ -1.06
SV2B-202ENST00000394232 FAM9BQ8IZU0 186 aa8.43□□□□□ -1.06
SV2B-202ENST00000394232 DDX10Q13206 875 aaKnown RBP8.42□□□□□ -1.06
SV2B-202ENST00000394232 FBLN2P98095 1184 aa8.4□□□□□ -1.06
SV2B-202ENST00000394232 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
SV2B-202ENST00000394232 TNNT2P45379 298 aaPredicted RBP8.39□□□□□ -1.07
SV2B-202ENST00000394232 CSRNP3Q8WYN3 585 aa8.39□□□□□ -1.07
SV2B-202ENST00000394232 DDRGK1Q96HY6 314 aa8.39□□□□□ -1.07
SV2B-202ENST00000394232 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
SV2B-202ENST00000394232 BECN1Q14457 450 aa8.39□□□□□ -1.07
SV2B-202ENST00000394232 P3H3Q8IVL6 736 aa8.39□□□□□ -1.07
SV2B-202ENST00000394232 ZNF777Q9ULD5 760 aaPredicted RBP8.38□□□□□ -1.07
SV2B-202ENST00000394232 MYH16Q9H6N6 1097 aa8.38□□□□□ -1.07
SV2B-202ENST00000394232 SCAF1Q9H7N4 1312 aaKnown RBP8.38□□□□□ -1.07
SV2B-202ENST00000394232 ARID3CA6NKF2 412 aa8.37□□□□□ -1.07
SV2B-202ENST00000394232 PABPN1Q86U42 306 aaKnown RBP eCLIP8.37□□□□□ -1.07
SV2B-202ENST00000394232 WDR43Q15061 677 aaKnown RBP eCLIP8.36□□□□□ -1.07
SV2B-202ENST00000394232 TRIM44Q96DX7 344 aaPredicted RBP8.36□□□□□ -1.07
SV2B-202ENST00000394232 ABCC9O60706 1549 aa8.36□□□□□ -1.07
SV2B-202ENST00000394232 CDK11BP21127 795 aaKnown RBP8.36□□□□□ -1.07
SV2B-202ENST00000394232 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
SV2B-202ENST00000394232 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
SV2B-202ENST00000394232 CCDC180Q9P1Z9 1646 aa8.34□□□□□ -1.07
SV2B-202ENST00000394232 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
SV2B-202ENST00000394232 GOLGA6L22H0YM25 854 aa8.34□□□□□ -1.07
SV2B-202ENST00000394232 NCLP19338 710 aaKnown RBP8.33□□□□□ -1.08
SV2B-202ENST00000394232 STAG3Q9UJ98 1225 aa8.33□□□□□ -1.08
SV2B-202ENST00000394232 IRX6P78412 446 aaPredicted RBP8.32□□□□□ -1.08
SV2B-202ENST00000394232 CHGAP10645 457 aaKnown RBP8.31□□□□□ -1.08
SV2B-202ENST00000394232 SCRIBQ14160 1630 aa8.31□□□□□ -1.08
SV2B-202ENST00000394232 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
SV2B-202ENST00000394232 MIER1Q8N108 512 aa8.31□□□□□ -1.08
SV2B-202ENST00000394232 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
SV2B-202ENST00000394232 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms