RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 REV3LO60673 3130 aa6□□□□□ -1.45
CCDC85C-201ENST00000380243 LAMA1P25391 3075 aa5.98□□□□□ -1.45
CCDC85C-201ENST00000380243 UNC80Q8N2C7 3258 aa5.98□□□□□ -1.45
CCDC85C-201ENST00000380243 VWFP04275 2813 aa5.96□□□□□ -1.46
CCDC85C-201ENST00000380243 BOD1L1Q8NFC6 3051 aa5.95□□□□□ -1.46
CCDC85C-201ENST00000380243 ATMQ13315 3056 aa5.95□□□□□ -1.46
CCDC85C-201ENST00000380243 TNRC18O15417 2968 aaPredicted RBP5.95□□□□□ -1.46
CCDC85C-201ENST00000380243 M0R2T5 61 aa5.94□□□□□ -1.46
CCDC85C-201ENST00000380243 KRTAP10-1P60331 282 aa5.92□□□□□ -1.46
CCDC85C-201ENST00000380243 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
CCDC85C-201ENST00000380243 RANBP2P49792 3224 aaKnown RBP5.9□□□□□ -1.47
CCDC85C-201ENST00000380243 ADGRG4Q8IZF6 3080 aa5.9□□□□□ -1.47
CCDC85C-201ENST00000380243 UTRNP46939 3433 aa5.88□□□□□ -1.47
CCDC85C-201ENST00000380243 HTTP42858 3142 aa5.88□□□□□ -1.47
CCDC85C-201ENST00000380243 MXRA5Q9NR99 2828 aa5.88□□□□□ -1.47
CCDC85C-201ENST00000380243 MKI67P46013 3256 aaKnown RBP5.86□□□□□ -1.47
CCDC85C-201ENST00000380243 TENM2Q9NT68 2774 aa5.86□□□□□ -1.47
CCDC85C-201ENST00000380243 DMXL1Q9Y485 3027 aa5.86□□□□□ -1.47
CCDC85C-201ENST00000380243 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
CCDC85C-201ENST00000380243 H0YAA0 97 aa5.85□□□□□ -1.47
CCDC85C-201ENST00000380243 CFAP47Q6ZTR5 3102 aa5.84□□□□□ -1.47
CCDC85C-201ENST00000380243 RPS29P62273 56 aaKnown RBP5.83□□□□□ -1.48
CCDC85C-201ENST00000380243 P0C880 135 aa5.82□□□□□ -1.48
CCDC85C-201ENST00000380243 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
CCDC85C-201ENST00000380243 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
CCDC85C-201ENST00000380243 CELSR3Q9NYQ7 3312 aa5.81□□□□□ -1.48
CCDC85C-201ENST00000380243 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
CCDC85C-201ENST00000380243 CELSR1Q9NYQ6 3014 aa5.75□□□□□ -1.49
CCDC85C-201ENST00000380243 KRTAP13-2Q52LG2 175 aa5.74□□□□□ -1.49
CCDC85C-201ENST00000380243 TNP1P09430 55 aa5.72□□□□□ -1.49
CCDC85C-201ENST00000380243 XIRP2A4UGR9 3374 aa5.69□□□□□ -1.5
CCDC85C-201ENST00000380243 Q6ZRN7 208 aaPredicted RBP5.69□□□□□ -1.5
CCDC85C-201ENST00000380243 HRNRQ86YZ3 2850 aaPredicted RBP5.69□□□□□ -1.5
CCDC85C-201ENST00000380243 Q5VSD8 79 aa5.66□□□□□ -1.5
CCDC85C-201ENST00000380243 KRTAP10-8P60410 259 aa5.65□□□□□ -1.5
CCDC85C-201ENST00000380243 COL6A3P12111 3177 aa5.63□□□□□ -1.51
CCDC85C-201ENST00000380243 FBN1P35555 2871 aaKnown RBP5.59□□□□□ -1.51
CCDC85C-201ENST00000380243 COL7A1Q02388 2944 aa5.58□□□□□ -1.52
CCDC85C-201ENST00000380243 FBN3Q75N90 2809 aa5.51□□□□□ -1.53
CCDC85C-201ENST00000380243 MEGF8Q7Z7M0 2845 aa5.51□□□□□ -1.53
CCDC85C-201ENST00000380243 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
CCDC85C-201ENST00000380243 LAMA3Q16787 3333 aa5.46□□□□□ -1.53
CCDC85C-201ENST00000380243 CDH23Q9H251 3354 aa5.46□□□□□ -1.54
CCDC85C-201ENST00000380243 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
CCDC85C-201ENST00000380243 DNAH14Q0VDD8 3507 aa5.39□□□□□ -1.55
CCDC85C-201ENST00000380243 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
CCDC85C-201ENST00000380243 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
CCDC85C-201ENST00000380243 VCANP13611 3396 aa5.36□□□□□ -1.55
CCDC85C-201ENST00000380243 ZFHX3Q15911 3703 aa5.33□□□□□ -1.56
CCDC85C-201ENST00000380243 XP32Q5T750 250 aa5.32□□□□□ -1.56
CCDC85C-201ENST00000380243 OTOGQ6ZRI0 2925 aa5.31□□□□□ -1.56
CCDC85C-201ENST00000380243 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
CCDC85C-201ENST00000380243 BRCA2P51587 3418 aa5.28□□□□□ -1.56
CCDC85C-201ENST00000380243 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
CCDC85C-201ENST00000380243 MYO15AQ9UKN7 3530 aa5.26□□□□□ -1.57
CCDC85C-201ENST00000380243 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
CCDC85C-201ENST00000380243 A0A1B0GVY2 172 aa5.19□□□□□ -1.58
CCDC85C-201ENST00000380243 SPEGQ15772 3267 aa5.19□□□□□ -1.58
CCDC85C-201ENST00000380243 EYSQ5T1H1 3165 aa5.19□□□□□ -1.58
CCDC85C-201ENST00000380243 SZT2Q5T011 3432 aa5.16□□□□□ -1.58
CCDC85C-201ENST00000380243 INE1O15225 51 aa5.15□□□□□ -1.58
CCDC85C-201ENST00000380243 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
CCDC85C-201ENST00000380243 AKAP9Q99996 3911 aa5.12□□□□□ -1.59
CCDC85C-201ENST00000380243 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
CCDC85C-201ENST00000380243 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
CCDC85C-201ENST00000380243 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
CCDC85C-201ENST00000380243 ALMS1Q8TCU4 4167 aa5.07□□□□□ -1.6
CCDC85C-201ENST00000380243 SPTBN5Q9NRC6 3674 aaKnown RBP5.04□□□□□ -1.6
CCDC85C-201ENST00000380243 LOC400499M0QZD8 3231 aa5.03□□□□□ -1.6
CCDC85C-201ENST00000380243 TRRAPQ9Y4A5 3859 aa5.02□□□□□ -1.61
CCDC85C-201ENST00000380243 DCHS1Q96JQ0 3298 aa5.02□□□□□ -1.61
CCDC85C-201ENST00000380243 NBPF19A0A087WUL8 3843 aa5.01□□□□□ -1.61
CCDC85C-201ENST00000380243 USP34Q70CQ2 3546 aa4.97□□□□□ -1.61
CCDC85C-201ENST00000380243 ZFHX4Q86UP3 3567 aa4.94□□□□□ -1.62
CCDC85C-201ENST00000380243 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
CCDC85C-201ENST00000380243 WDFY3Q8IZQ1 3526 aa4.85□□□□□ -1.63
CCDC85C-201ENST00000380243 SMG1Q96Q15 3661 aaKnown RBP4.82□□□□□ -1.64
CCDC85C-201ENST00000380243 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
CCDC85C-201ENST00000380243 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
CCDC85C-201ENST00000380243 SPENQ96T58 3664 aaKnown RBP4.76□□□□□ -1.65
CCDC85C-201ENST00000380243 CSMD1Q96PZ7 3565 aa4.76□□□□□ -1.65
CCDC85C-201ENST00000380243 CMYA5Q8N3K9 4069 aa4.74□□□□□ -1.65
CCDC85C-201ENST00000380243 DNAH3Q8TD57 4116 aa4.72□□□□□ -1.65
CCDC85C-201ENST00000380243 DMDP11532 3685 aa4.72□□□□□ -1.65
CCDC85C-201ENST00000380243 VPS13CQ709C8 3753 aa4.72□□□□□ -1.65
CCDC85C-201ENST00000380243 DNAH11Q96DT5 4516 aa4.7□□□□□ -1.66
CCDC85C-201ENST00000380243 DNAH1Q9P2D7 4330 aa4.68□□□□□ -1.66
CCDC85C-201ENST00000380243 LAMA5O15230 3695 aa4.67□□□□□ -1.66
CCDC85C-201ENST00000380243 ASPMQ8IZT6 3477 aa4.67□□□□□ -1.66
CCDC85C-201ENST00000380243 BSNQ9UPA5 3926 aa4.66□□□□□ -1.66
CCDC85C-201ENST00000380243 ZNF469Q96JG9 3925 aaPredicted RBP4.64□□□□□ -1.67
CCDC85C-201ENST00000380243 CSMD3Q7Z407 3707 aa4.64□□□□□ -1.67
CCDC85C-201ENST00000380243 ANK3Q12955 4377 aaKnown RBP4.63□□□□□ -1.67
CCDC85C-201ENST00000380243 RELNP78509 3460 aa4.63□□□□□ -1.67
CCDC85C-201ENST00000380243 KRTAP21-3Q3LHN1 58 aa4.63□□□□□ -1.67
CCDC85C-201ENST00000380243 CUBNO60494 3623 aa4.61□□□□□ -1.67
CCDC85C-201ENST00000380243 DNAH2Q9P225 4427 aa4.6□□□□□ -1.67
CCDC85C-201ENST00000380243 KRTAP10-12P60413 245 aa4.59□□□□□ -1.68
CCDC85C-201ENST00000380243 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
CCDC85C-201ENST00000380243 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms