RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 CELSR3Q9NYQ7 3312 aa8.17□□□□□ -1.1
PCDH17-201ENST00000377918 PRUNE2Q8WUY3 3088 aa8.17□□□□□ -1.1
PCDH17-201ENST00000377918 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
PCDH17-201ENST00000377918 FLNCQ14315 2725 aa8.15□□□□□ -1.11
PCDH17-201ENST00000377918 P0C880 135 aa8.13□□□□□ -1.11
PCDH17-201ENST00000377918 CELSR2Q9HCU4 2923 aa8.1□□□□□ -1.11
PCDH17-201ENST00000377918 HIVEP1P15822 2718 aa8.1□□□□□ -1.11
PCDH17-201ENST00000377918 TGP01266 2768 aa8.09□□□□□ -1.11
PCDH17-201ENST00000377918 TACC2O95359 2948 aa8.09□□□□□ -1.11
PCDH17-201ENST00000377918 PDZD2O15018 2839 aa8.07□□□□□ -1.12
PCDH17-201ENST00000377918 MKI67P46013 3256 aaKnown RBP8.05□□□□□ -1.12
PCDH17-201ENST00000377918 TNRC18O15417 2968 aaPredicted RBP8.05□□□□□ -1.12
PCDH17-201ENST00000377918 ZZEF1O43149 2961 aa8.02□□□□□ -1.13
PCDH17-201ENST00000377918 USP34Q70CQ2 3546 aa8.01□□□□□ -1.13
PCDH17-201ENST00000377918 KRTAP10-8P60410 259 aa8□□□□□ -1.13
PCDH17-201ENST00000377918 DMXL1Q9Y485 3027 aa7.99□□□□□ -1.13
PCDH17-201ENST00000377918 BOD1L1Q8NFC6 3051 aa7.99□□□□□ -1.13
PCDH17-201ENST00000377918 NBEAQ8NFP9 2946 aa7.98□□□□□ -1.13
PCDH17-201ENST00000377918 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
PCDH17-201ENST00000377918 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
PCDH17-201ENST00000377918 HTTP42858 3142 aa7.86□□□□□ -1.15
PCDH17-201ENST00000377918 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
PCDH17-201ENST00000377918 DNAH14Q0VDD8 3507 aa7.85□□□□□ -1.15
PCDH17-201ENST00000377918 ATMQ13315 3056 aa7.85□□□□□ -1.15
PCDH17-201ENST00000377918 SRRM2Q9UQ35 2752 aaKnown RBP7.85□□□□□ -1.15
PCDH17-201ENST00000377918 COL6A3P12111 3177 aa7.84□□□□□ -1.15
PCDH17-201ENST00000377918 H0YAA0 97 aa7.82□□□□□ -1.16
PCDH17-201ENST00000377918 ADGRG4Q8IZF6 3080 aa7.82□□□□□ -1.16
PCDH17-201ENST00000377918 DCHS2Q6V1P9 2916 aa7.81□□□□□ -1.16
PCDH17-201ENST00000377918 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
PCDH17-201ENST00000377918 KRTAP21-3Q3LHN1 58 aa7.76□□□□□ -1.17
PCDH17-201ENST00000377918 LAMA3Q16787 3333 aa7.67□□□□□ -1.18
PCDH17-201ENST00000377918 XP32Q5T750 250 aa7.66□□□□□ -1.18
PCDH17-201ENST00000377918 BRCA2P51587 3418 aa7.66□□□□□ -1.18
PCDH17-201ENST00000377918 SPEGQ15772 3267 aa7.65□□□□□ -1.18
PCDH17-201ENST00000377918 TENM2Q9NT68 2774 aa7.65□□□□□ -1.18
PCDH17-201ENST00000377918 KRTAP7-1Q8IUC3 87 aa7.62□□□□□ -1.19
PCDH17-201ENST00000377918 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
PCDH17-201ENST00000377918 FBN2P35556 2912 aa7.61□□□□□ -1.19
PCDH17-201ENST00000377918 TENM4Q6N022 2769 aa7.59□□□□□ -1.19
PCDH17-201ENST00000377918 ZANQ9Y493 2812 aa7.58□□□□□ -1.2
PCDH17-201ENST00000377918 CFAP47Q6ZTR5 3102 aa7.58□□□□□ -1.2
PCDH17-201ENST00000377918 INE1O15225 51 aa7.57□□□□□ -1.2
PCDH17-201ENST00000377918 COL7A1Q02388 2944 aa7.54□□□□□ -1.2
PCDH17-201ENST00000377918 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
PCDH17-201ENST00000377918 VWFP04275 2813 aa7.51□□□□□ -1.21
PCDH17-201ENST00000377918 VCANP13611 3396 aa7.51□□□□□ -1.21
PCDH17-201ENST00000377918 PKD1L1Q8TDX9 2849 aa7.5□□□□□ -1.21
PCDH17-201ENST00000377918 MXRA5Q9NR99 2828 aa7.49□□□□□ -1.21
PCDH17-201ENST00000377918 ZFHX4Q86UP3 3567 aa7.43□□□□□ -1.22
PCDH17-201ENST00000377918 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.23
PCDH17-201ENST00000377918 CDH23Q9H251 3354 aa7.39□□□□□ -1.23
PCDH17-201ENST00000377918 NBPF19A0A087WUL8 3843 aa7.37□□□□□ -1.23
PCDH17-201ENST00000377918 KRTAP13-3Q3SY46 172 aa7.37□□□□□ -1.23
PCDH17-201ENST00000377918 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
PCDH17-201ENST00000377918 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
PCDH17-201ENST00000377918 HRNRQ86YZ3 2850 aaPredicted RBP7.29□□□□□ -1.24
PCDH17-201ENST00000377918 MEGF8Q7Z7M0 2845 aa7.29□□□□□ -1.24
PCDH17-201ENST00000377918 SZT2Q5T011 3432 aa7.28□□□□□ -1.24
PCDH17-201ENST00000377918 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.25
PCDH17-201ENST00000377918 EYSQ5T1H1 3165 aa7.21□□□□□ -1.26
PCDH17-201ENST00000377918 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
PCDH17-201ENST00000377918 LOC400499M0QZD8 3231 aa7.16□□□□□ -1.26
PCDH17-201ENST00000377918 SPTBN5Q9NRC6 3674 aaKnown RBP7.13□□□□□ -1.27
PCDH17-201ENST00000377918 WDFY3Q8IZQ1 3526 aa7.12□□□□□ -1.27
PCDH17-201ENST00000377918 ZFHX3Q15911 3703 aa7.07□□□□□ -1.28
PCDH17-201ENST00000377918 OTOGQ6ZRI0 2925 aa7.06□□□□□ -1.28
PCDH17-201ENST00000377918 LAMA5O15230 3695 aa7.03□□□□□ -1.28
PCDH17-201ENST00000377918 ASPMQ8IZT6 3477 aa7.02□□□□□ -1.29
PCDH17-201ENST00000377918 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
PCDH17-201ENST00000377918 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
PCDH17-201ENST00000377918 MYO15AQ9UKN7 3530 aa6.97□□□□□ -1.29
PCDH17-201ENST00000377918 DCHS1Q96JQ0 3298 aa6.86□□□□□ -1.31
PCDH17-201ENST00000377918 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
PCDH17-201ENST00000377918 RELNP78509 3460 aa6.82□□□□□ -1.32
PCDH17-201ENST00000377918 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
PCDH17-201ENST00000377918 SMG1Q96Q15 3661 aaKnown RBP6.76□□□□□ -1.33
PCDH17-201ENST00000377918 AKAP9Q99996 3911 aa6.74□□□□□ -1.33
PCDH17-201ENST00000377918 CSMD1Q96PZ7 3565 aa6.71□□□□□ -1.34
PCDH17-201ENST00000377918 DMDP11532 3685 aa6.66□□□□□ -1.34
PCDH17-201ENST00000377918 FBN1P35555 2871 aaKnown RBP6.65□□□□□ -1.34
PCDH17-201ENST00000377918 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
PCDH17-201ENST00000377918 TRRAPQ9Y4A5 3859 aa6.58□□□□□ -1.36
PCDH17-201ENST00000377918 VPS13CQ709C8 3753 aa6.58□□□□□ -1.36
PCDH17-201ENST00000377918 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
PCDH17-201ENST00000377918 KRTAP12-3P60328 96 aa6.54□□□□□ -1.36
PCDH17-201ENST00000377918 ALMS1Q8TCU4 4167 aa6.43□□□□□ -1.38
PCDH17-201ENST00000377918 CMYA5Q8N3K9 4069 aa6.36□□□□□ -1.39
PCDH17-201ENST00000377918 MUC3AQ02505 3323 aa6.36□□□□□ -1.39
PCDH17-201ENST00000377918 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
PCDH17-201ENST00000377918 CSMD3Q7Z407 3707 aa6.27□□□□□ -1.41
PCDH17-201ENST00000377918 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
PCDH17-201ENST00000377918 CUBNO60494 3623 aa6.26□□□□□ -1.41
PCDH17-201ENST00000377918 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
PCDH17-201ENST00000377918 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
PCDH17-201ENST00000377918 KRTAP10-5P60370 271 aa6.21□□□□□ -1.41
PCDH17-201ENST00000377918 SVEP1Q4LDE5 3571 aa6.17□□□□□ -1.42
PCDH17-201ENST00000377918 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
PCDH17-201ENST00000377918 BSNQ9UPA5 3926 aa6.14□□□□□ -1.43
PCDH17-201ENST00000377918 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms