RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.5
PCDH17-201ENST00000377918 MYT1Q01538 1121 aa23.25■■□□□ 1.31
PCDH17-201ENST00000377918 DCAF8L2P0C7V8 631 aa23.21■■□□□ 1.31
PCDH17-201ENST00000377918 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
PCDH17-201ENST00000377918 ERICH6Q7L0X2 663 aa22.87■■□□□ 1.25
PCDH17-201ENST00000377918 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
PCDH17-201ENST00000377918 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
PCDH17-201ENST00000377918 APLP2Q06481 763 aa22.59■■□□□ 1.21
PCDH17-201ENST00000377918 CENPBP07199 599 aaPredicted RBP22.48■■□□□ 1.19
PCDH17-201ENST00000377918 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
PCDH17-201ENST00000377918 NEFLP07196 543 aa22.13■■□□□ 1.13
PCDH17-201ENST00000377918 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
PCDH17-201ENST00000377918 DAXXQ9UER7 740 aaPredicted RBP21.91■■□□□ 1.1
PCDH17-201ENST00000377918 TTBK1Q5TCY1 1321 aaPredicted RBP21.75■■□□□ 1.07
PCDH17-201ENST00000377918 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
PCDH17-201ENST00000377918 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
PCDH17-201ENST00000377918 EHMT2Q96KQ7 1210 aa21.28■■□□□ 1
PCDH17-201ENST00000377918 RTL5Q5HYW3 569 aaPredicted RBP21.26■□□□□ 0.99
PCDH17-201ENST00000377918 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.99
PCDH17-201ENST00000377918 ZNF316A6NFI3 1004 aaPredicted RBP21.2■□□□□ 0.98
PCDH17-201ENST00000377918 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
PCDH17-201ENST00000377918 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
PCDH17-201ENST00000377918 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
PCDH17-201ENST00000377918 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
PCDH17-201ENST00000377918 GLIPR1L2Q4G1C9 344 aa20.76■□□□□ 0.91
PCDH17-201ENST00000377918 ZBTB47Q9UFB7 747 aaPredicted RBP20.72■□□□□ 0.91
PCDH17-201ENST00000377918 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
PCDH17-201ENST00000377918 ANP32BQ92688 251 aaKnown RBP20.6■□□□□ 0.89
PCDH17-201ENST00000377918 NEFMP07197 916 aa20.56■□□□□ 0.88
PCDH17-201ENST00000377918 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
PCDH17-201ENST00000377918 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
PCDH17-201ENST00000377918 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
PCDH17-201ENST00000377918 POLR3GLQ9BT43 218 aa20.41■□□□□ 0.86
PCDH17-201ENST00000377918 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
PCDH17-201ENST00000377918 HRCP23327 699 aa20.31■□□□□ 0.84
PCDH17-201ENST00000377918 ANP32AP39687 249 aaKnown RBP20.28■□□□□ 0.84
PCDH17-201ENST00000377918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
PCDH17-201ENST00000377918 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
PCDH17-201ENST00000377918 DIEXFQ68CQ4 756 aaKnown RBP20.15■□□□□ 0.82
PCDH17-201ENST00000377918 UPF2Q9HAU5 1272 aaKnown RBP20.13■□□□□ 0.81
PCDH17-201ENST00000377918 CANXP27824 592 aaKnown RBP20.1■□□□□ 0.81
PCDH17-201ENST00000377918 ANP32CO43423 234 aa20.1■□□□□ 0.81
PCDH17-201ENST00000377918 HSP90AA1P07900 732 aaKnown RBP20.05■□□□□ 0.8
PCDH17-201ENST00000377918 CDK11BP21127 795 aaKnown RBP20.04■□□□□ 0.8
PCDH17-201ENST00000377918 TNNT2P45379 298 aaPredicted RBP20.02■□□□□ 0.8
PCDH17-201ENST00000377918 ITGAEP38570 1179 aa19.97■□□□□ 0.79
PCDH17-201ENST00000377918 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
PCDH17-201ENST00000377918 EIF5BO60841 1220 aaKnown RBP19.93■□□□□ 0.78
PCDH17-201ENST00000377918 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
PCDH17-201ENST00000377918 CNGB1Q14028 1251 aaPredicted RBP19.77■□□□□ 0.76
PCDH17-201ENST00000377918 TRIM44Q96DX7 344 aaPredicted RBP19.76■□□□□ 0.75
PCDH17-201ENST00000377918 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
PCDH17-201ENST00000377918 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
PCDH17-201ENST00000377918 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.68■□□□□ 0.74
PCDH17-201ENST00000377918 FAM50AQ14320 339 aaKnown RBP19.67■□□□□ 0.74
PCDH17-201ENST00000377918 PPARGC1BQ86YN6 1023 aaKnown RBP19.63■□□□□ 0.73
PCDH17-201ENST00000377918 GTF3C3Q9Y5Q9 886 aa19.63■□□□□ 0.73
PCDH17-201ENST00000377918 NCLP19338 710 aaKnown RBP19.58■□□□□ 0.73
PCDH17-201ENST00000377918 GOLGA6L22H0YM25 854 aa19.55■□□□□ 0.72
PCDH17-201ENST00000377918 BECN1Q14457 450 aa19.54■□□□□ 0.72
PCDH17-201ENST00000377918 DDRGK1Q96HY6 314 aa19.52■□□□□ 0.72
PCDH17-201ENST00000377918 MYH16Q9H6N6 1097 aa19.5■□□□□ 0.71
PCDH17-201ENST00000377918 ZRSR1Q15695 479 aaKnown RBP19.49■□□□□ 0.71
PCDH17-201ENST00000377918 NEUROD1Q13562 356 aa19.46■□□□□ 0.71
PCDH17-201ENST00000377918 BCANQ96GW7 911 aa19.45■□□□□ 0.7
PCDH17-201ENST00000377918 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
PCDH17-201ENST00000377918 ACIN1Q9UKV3 1341 aaKnown RBP19.44■□□□□ 0.7
PCDH17-201ENST00000377918 L1TD1Q5T7N2 865 aaKnown RBP19.42■□□□□ 0.7
PCDH17-201ENST00000377918 GOLGA6L6A8MZA4 724 aa19.42■□□□□ 0.7
PCDH17-201ENST00000377918 NRDCO43847 1150 aa19.42■□□□□ 0.7
PCDH17-201ENST00000377918 ERICH6BQ5W0A0 696 aa19.38■□□□□ 0.69
PCDH17-201ENST00000377918 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
PCDH17-201ENST00000377918 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
PCDH17-201ENST00000377918 ZNF326Q5BKZ1 582 aaKnown RBP19.34■□□□□ 0.69
PCDH17-201ENST00000377918 CASC1Q6TDU7 716 aa19.33■□□□□ 0.69
PCDH17-201ENST00000377918 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
PCDH17-201ENST00000377918 CHAF1AQ13111 956 aaPredicted RBP19.25■□□□□ 0.67
PCDH17-201ENST00000377918 DNTTIP2Q5QJE6 756 aaKnown RBP19.25■□□□□ 0.67
PCDH17-201ENST00000377918 USP35Q9P2H5 1018 aa19.24■□□□□ 0.67
PCDH17-201ENST00000377918 PTMAP06454 111 aaKnown RBP19.23■□□□□ 0.67
PCDH17-201ENST00000377918 TONSLQ96HA7 1378 aa19.22■□□□□ 0.67
PCDH17-201ENST00000377918 WDR43Q15061 677 aaKnown RBP eCLIP19.19■□□□□ 0.66
PCDH17-201ENST00000377918 TMC1Q8TDI8 760 aa19.18■□□□□ 0.66
PCDH17-201ENST00000377918 CHMP4BQ9H444 224 aaKnown RBP19.17■□□□□ 0.66
PCDH17-201ENST00000377918 CFAP44Q96MT7 982 aa19.15■□□□□ 0.66
PCDH17-201ENST00000377918 FKBP8Q14318 412 aa19.14■□□□□ 0.65
PCDH17-201ENST00000377918 NBR1Q14596 966 aa19.13■□□□□ 0.65
PCDH17-201ENST00000377918 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
PCDH17-201ENST00000377918 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
PCDH17-201ENST00000377918 PPM1GO15355 546 aaPredicted RBP19.1■□□□□ 0.65
PCDH17-201ENST00000377918 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCDH17-201ENST00000377918 PTMSP20962 102 aa19.06■□□□□ 0.64
PCDH17-201ENST00000377918 KIAA2012Q0VF49 1180 aa19.01■□□□□ 0.63
PCDH17-201ENST00000377918 ARID4BQ4LE39 1312 aaPredicted RBP18.98■□□□□ 0.63
PCDH17-201ENST00000377918 MS4A1P11836 297 aa18.96■□□□□ 0.63
PCDH17-201ENST00000377918 ARXQ96QS3 562 aa18.95■□□□□ 0.62
PCDH17-201ENST00000377918 NAP1L5Q96NT1 182 aaPredicted RBP18.94■□□□□ 0.62
PCDH17-201ENST00000377918 MSNP26038 577 aaKnown RBP18.93■□□□□ 0.62
PCDH17-201ENST00000377918 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
PCDH17-201ENST00000377918 PNNQ9H307 717 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms