RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 MXRA5Q9NR99 2828 aa2.96□□□□□ -1.94
SCN2A-203ENST00000375437 TPRXLQ17RH7 258 aa2.95□□□□□ -1.94
SCN2A-203ENST00000375437 FRYQ5TBA9 3013 aa2.94□□□□□ -1.94
SCN2A-203ENST00000375437 A0A1B0GVY2 172 aa2.94□□□□□ -1.94
SCN2A-203ENST00000375437 ZZEF1O43149 2961 aa2.94□□□□□ -1.94
SCN2A-203ENST00000375437 KRTAP13-2Q52LG2 175 aa2.94□□□□□ -1.94
SCN2A-203ENST00000375437 TENM4Q6N022 2769 aa2.92□□□□□ -1.94
SCN2A-203ENST00000375437 XIRP2A4UGR9 3374 aa2.92□□□□□ -1.94
SCN2A-203ENST00000375437 TNRC18O15417 2968 aaPredicted RBP2.91□□□□□ -1.94
SCN2A-203ENST00000375437 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
SCN2A-203ENST00000375437 XP32Q5T750 250 aa2.91□□□□□ -1.94
SCN2A-203ENST00000375437 TACC2O95359 2948 aa2.9□□□□□ -1.95
SCN2A-203ENST00000375437 DCHS2Q6V1P9 2916 aa2.9□□□□□ -1.95
SCN2A-203ENST00000375437 ASH1LQ9NR48 2969 aaKnown RBP2.89□□□□□ -1.95
SCN2A-203ENST00000375437 TRIOO75962 3097 aa2.87□□□□□ -1.95
SCN2A-203ENST00000375437 VWFP04275 2813 aa2.85□□□□□ -1.95
SCN2A-203ENST00000375437 VPS13AQ96RL7 3174 aa2.85□□□□□ -1.95
SCN2A-203ENST00000375437 NBEAQ8NFP9 2946 aa2.84□□□□□ -1.95
SCN2A-203ENST00000375437 USP34Q70CQ2 3546 aa2.84□□□□□ -1.95
SCN2A-203ENST00000375437 PRUNE2Q8WUY3 3088 aa2.84□□□□□ -1.95
SCN2A-203ENST00000375437 CELSR3Q9NYQ7 3312 aa2.84□□□□□ -1.96
SCN2A-203ENST00000375437 HRNRQ86YZ3 2850 aaPredicted RBP2.83□□□□□ -1.96
SCN2A-203ENST00000375437 SRRM2Q9UQ35 2752 aaKnown RBP2.83□□□□□ -1.96
SCN2A-203ENST00000375437 COL12A1Q99715 3063 aa2.82□□□□□ -1.96
SCN2A-203ENST00000375437 MKI67P46013 3256 aaKnown RBP2.81□□□□□ -1.96
SCN2A-203ENST00000375437 UNC80Q8N2C7 3258 aa2.8□□□□□ -1.96
SCN2A-203ENST00000375437 FBN2P35556 2912 aa2.8□□□□□ -1.96
SCN2A-203ENST00000375437 H0YAA0 97 aa2.8□□□□□ -1.96
SCN2A-203ENST00000375437 LAMA1P25391 3075 aa2.79□□□□□ -1.96
SCN2A-203ENST00000375437 RANBP2P49792 3224 aaKnown RBP2.79□□□□□ -1.96
SCN2A-203ENST00000375437 FREM2Q5SZK8 3169 aa2.78□□□□□ -1.96
SCN2A-203ENST00000375437 KRTAP13-3Q3SY46 172 aa2.77□□□□□ -1.97
SCN2A-203ENST00000375437 KRTAP7-1Q8IUC3 87 aa2.77□□□□□ -1.97
SCN2A-203ENST00000375437 PKD1L1Q8TDX9 2849 aa2.77□□□□□ -1.97
SCN2A-203ENST00000375437 ZFHX3Q15911 3703 aa2.76□□□□□ -1.97
SCN2A-203ENST00000375437 DNAH14Q0VDD8 3507 aa2.76□□□□□ -1.97
SCN2A-203ENST00000375437 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
SCN2A-203ENST00000375437 TENM2Q9NT68 2774 aa2.75□□□□□ -1.97
SCN2A-203ENST00000375437 NBPF19A0A087WUL8 3843 aa2.75□□□□□ -1.97
SCN2A-203ENST00000375437 DMXL2Q8TDJ6 3036 aa2.75□□□□□ -1.97
SCN2A-203ENST00000375437 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
SCN2A-203ENST00000375437 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
SCN2A-203ENST00000375437 KRTAP15-1Q3LI76 137 aa2.74□□□□□ -1.97
SCN2A-203ENST00000375437 CELSR1Q9NYQ6 3014 aa2.73□□□□□ -1.97
SCN2A-203ENST00000375437 LAMA3Q16787 3333 aa2.72□□□□□ -1.97
SCN2A-203ENST00000375437 BOD1L1Q8NFC6 3051 aa2.72□□□□□ -1.97
SCN2A-203ENST00000375437 SPEGQ15772 3267 aa2.71□□□□□ -1.98
SCN2A-203ENST00000375437 COL6A3P12111 3177 aa2.71□□□□□ -1.98
SCN2A-203ENST00000375437 HTTP42858 3142 aa2.71□□□□□ -1.98
SCN2A-203ENST00000375437 COL7A1Q02388 2944 aa2.7□□□□□ -1.98
SCN2A-203ENST00000375437 ATMQ13315 3056 aa2.7□□□□□ -1.98
SCN2A-203ENST00000375437 BRCA2P51587 3418 aa2.7□□□□□ -1.98
SCN2A-203ENST00000375437 ADGRG4Q8IZF6 3080 aa2.68□□□□□ -1.98
SCN2A-203ENST00000375437 INE1O15225 51 aa2.67□□□□□ -1.98
SCN2A-203ENST00000375437 MEGF8Q7Z7M0 2845 aa2.66□□□□□ -1.98
SCN2A-203ENST00000375437 KRTAP23-1A1A580 65 aa2.66□□□□□ -1.98
SCN2A-203ENST00000375437 VCANP13611 3396 aa2.66□□□□□ -1.98
SCN2A-203ENST00000375437 CFAP47Q6ZTR5 3102 aa2.66□□□□□ -1.98
SCN2A-203ENST00000375437 ZFHX4Q86UP3 3567 aa2.65□□□□□ -1.98
SCN2A-203ENST00000375437 DMXL1Q9Y485 3027 aa2.63□□□□□ -1.99
SCN2A-203ENST00000375437 CDH23Q9H251 3354 aa2.59□□□□□ -1.99
SCN2A-203ENST00000375437 KRTAP12-1P59990 96 aa2.58□□□□□ -2
SCN2A-203ENST00000375437 CRCT1Q9UGL9 99 aa2.57□□□□□ -2
SCN2A-203ENST00000375437 FBN3Q75N90 2809 aa2.57□□□□□ -2
SCN2A-203ENST00000375437 KRTAP10-12P60413 245 aa2.56□□□□□ -2
SCN2A-203ENST00000375437 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
SCN2A-203ENST00000375437 KRTAP10-6P60371 365 aaPredicted RBP2.54□□□□□ -2
SCN2A-203ENST00000375437 SPTBN5Q9NRC6 3674 aaKnown RBP2.54□□□□□ -2
SCN2A-203ENST00000375437 ASPMQ8IZT6 3477 aa2.52□□□□□ -2.01
SCN2A-203ENST00000375437 SZT2Q5T011 3432 aa2.52□□□□□ -2.01
SCN2A-203ENST00000375437 LOC400499M0QZD8 3231 aa2.51□□□□□ -2.01
SCN2A-203ENST00000375437 SPENQ96T58 3664 aaKnown RBP2.5□□□□□ -2.01
SCN2A-203ENST00000375437 KRTAP19-4Q3LI73 84 aa2.5□□□□□ -2.01
SCN2A-203ENST00000375437 LAMA5O15230 3695 aa2.48□□□□□ -2.01
SCN2A-203ENST00000375437 WDFY3Q8IZQ1 3526 aa2.48□□□□□ -2.01
SCN2A-203ENST00000375437 EYSQ5T1H1 3165 aa2.47□□□□□ -2.01
SCN2A-203ENST00000375437 OTOGQ6ZRI0 2925 aa2.45□□□□□ -2.02
SCN2A-203ENST00000375437 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
SCN2A-203ENST00000375437 SMG1Q96Q15 3661 aaKnown RBP2.42□□□□□ -2.02
SCN2A-203ENST00000375437 DMDP11532 3685 aa2.42□□□□□ -2.02
SCN2A-203ENST00000375437 AKAP9Q99996 3911 aa2.42□□□□□ -2.02
SCN2A-203ENST00000375437 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
SCN2A-203ENST00000375437 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
SCN2A-203ENST00000375437 DCHS1Q96JQ0 3298 aa2.39□□□□□ -2.03
SCN2A-203ENST00000375437 VPS13CQ709C8 3753 aa2.38□□□□□ -2.03
SCN2A-203ENST00000375437 CMYA5Q8N3K9 4069 aa2.37□□□□□ -2.03
SCN2A-203ENST00000375437 MYO15AQ9UKN7 3530 aa2.36□□□□□ -2.03
SCN2A-203ENST00000375437 KRTAP3-1Q9BYR8 98 aa2.36□□□□□ -2.03
SCN2A-203ENST00000375437 RELNP78509 3460 aa2.36□□□□□ -2.03
SCN2A-203ENST00000375437 TRRAPQ9Y4A5 3859 aa2.35□□□□□ -2.03
SCN2A-203ENST00000375437 ALMS1Q8TCU4 4167 aa2.34□□□□□ -2.03
SCN2A-203ENST00000375437 CSMD1Q96PZ7 3565 aa2.33□□□□□ -2.04
SCN2A-203ENST00000375437 LORP23490 312 aaPredicted RBP2.32□□□□□ -2.04
SCN2A-203ENST00000375437 BSNQ9UPA5 3926 aa2.32□□□□□ -2.04
SCN2A-203ENST00000375437 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
SCN2A-203ENST00000375437 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
SCN2A-203ENST00000375437 MUC3AQ02505 3323 aa2.29□□□□□ -2.04
SCN2A-203ENST00000375437 DNAH7Q8WXX0 4024 aa2.28□□□□□ -2.04
SCN2A-203ENST00000375437 KRTAP3-2Q9BYR7 98 aa2.27□□□□□ -2.05
SCN2A-203ENST00000375437 MT1HL1P0DM35 61 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms