RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 DCAF8L2P0C7V8 631 aa9.05□□□□□ -0.96
SCN2A-203ENST00000375437 PELP1Q8IZL8 1130 aaKnown RBP8.92□□□□□ -0.98
SCN2A-203ENST00000375437 FAM9AQ8IZU1 332 aaPredicted RBP8.79□□□□□ -1
SCN2A-203ENST00000375437 APLP2Q06481 763 aa8.54□□□□□ -1.04
SCN2A-203ENST00000375437 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
SCN2A-203ENST00000375437 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
SCN2A-203ENST00000375437 SUPT5HO00267 1087 aaKnown RBP8.3□□□□□ -1.08
SCN2A-203ENST00000375437 MYT1Q01538 1121 aa8.3□□□□□ -1.08
SCN2A-203ENST00000375437 EHMT2Q96KQ7 1210 aa8.22□□□□□ -1.09
SCN2A-203ENST00000375437 YTHDC1Q96MU7 727 aaKnown RBP8.22□□□□□ -1.09
SCN2A-203ENST00000375437 NISCHQ9Y2I1 1504 aa8.21□□□□□ -1.1
SCN2A-203ENST00000375437 NEFLP07196 543 aa8.16□□□□□ -1.1
SCN2A-203ENST00000375437 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
SCN2A-203ENST00000375437 CENPBP07199 599 aaPredicted RBP8.14□□□□□ -1.11
SCN2A-203ENST00000375437 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
SCN2A-203ENST00000375437 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
SCN2A-203ENST00000375437 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
SCN2A-203ENST00000375437 ZEB1P37275 1124 aaPredicted RBP8□□□□□ -1.13
SCN2A-203ENST00000375437 TTBK1Q5TCY1 1321 aaPredicted RBP7.97□□□□□ -1.13
SCN2A-203ENST00000375437 RANGAP1P46060 587 aaPredicted RBP7.96□□□□□ -1.14
SCN2A-203ENST00000375437 PCGF6Q9BYE7 350 aa7.94□□□□□ -1.14
SCN2A-203ENST00000375437 SLC4A1APQ9BWU0 796 aaKnown RBP7.9□□□□□ -1.14
SCN2A-203ENST00000375437 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.15
SCN2A-203ENST00000375437 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
SCN2A-203ENST00000375437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.85□□□□□ -1.15
SCN2A-203ENST00000375437 HNRNPUL2Q1KMD3 747 aaKnown RBP7.85□□□□□ -1.15
SCN2A-203ENST00000375437 ZBTB47Q9UFB7 747 aaPredicted RBP7.84□□□□□ -1.15
SCN2A-203ENST00000375437 CLSPNQ9HAW4 1339 aa7.84□□□□□ -1.15
SCN2A-203ENST00000375437 CHIC1Q5VXU3 224 aa7.83□□□□□ -1.16
SCN2A-203ENST00000375437 POLR3GLQ9BT43 218 aa7.83□□□□□ -1.16
SCN2A-203ENST00000375437 TRIM41Q8WV44 630 aa7.79□□□□□ -1.16
SCN2A-203ENST00000375437 RTL5Q5HYW3 569 aaPredicted RBP7.78□□□□□ -1.16
SCN2A-203ENST00000375437 NEFMP07197 916 aa7.75□□□□□ -1.17
SCN2A-203ENST00000375437 SLC24A1O60721 1099 aa7.72□□□□□ -1.17
SCN2A-203ENST00000375437 BCANQ96GW7 911 aa7.65□□□□□ -1.19
SCN2A-203ENST00000375437 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
SCN2A-203ENST00000375437 CDK11AQ9UQ88 783 aaPredicted RBP7.62□□□□□ -1.19
SCN2A-203ENST00000375437 ITGAEP38570 1179 aa7.61□□□□□ -1.19
SCN2A-203ENST00000375437 CNGB1Q14028 1251 aaPredicted RBP7.61□□□□□ -1.19
SCN2A-203ENST00000375437 CANXP27824 592 aaKnown RBP7.6□□□□□ -1.19
SCN2A-203ENST00000375437 ANP32BQ92688 251 aaKnown RBP7.6□□□□□ -1.19
SCN2A-203ENST00000375437 ESF1Q9H501 851 aaKnown RBP7.57□□□□□ -1.2
SCN2A-203ENST00000375437 TRIM52Q96A61 297 aa7.49□□□□□ -1.21
SCN2A-203ENST00000375437 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
SCN2A-203ENST00000375437 HSP90AA1P07900 732 aaKnown RBP7.48□□□□□ -1.21
SCN2A-203ENST00000375437 TRIM26Q12899 539 aaPredicted RBP7.46□□□□□ -1.21
SCN2A-203ENST00000375437 FAM50AQ14320 339 aaKnown RBP7.46□□□□□ -1.22
SCN2A-203ENST00000375437 NPM2Q86SE8 214 aaKnown RBP7.44□□□□□ -1.22
SCN2A-203ENST00000375437 UPF2Q9HAU5 1272 aaKnown RBP7.44□□□□□ -1.22
SCN2A-203ENST00000375437 STAG3Q9UJ98 1225 aa7.44□□□□□ -1.22
SCN2A-203ENST00000375437 GLIPR1L2Q4G1C9 344 aa7.43□□□□□ -1.22
SCN2A-203ENST00000375437 ANP32CO43423 234 aa7.42□□□□□ -1.22
SCN2A-203ENST00000375437 PPARGC1BQ86YN6 1023 aaKnown RBP7.41□□□□□ -1.22
SCN2A-203ENST00000375437 ANP32AP39687 249 aaKnown RBP7.41□□□□□ -1.22
SCN2A-203ENST00000375437 ZNF326Q5BKZ1 582 aaKnown RBP7.39□□□□□ -1.23
SCN2A-203ENST00000375437 FBLN2P98095 1184 aa7.38□□□□□ -1.23
SCN2A-203ENST00000375437 SCAF1Q9H7N4 1312 aaKnown RBP7.37□□□□□ -1.23
SCN2A-203ENST00000375437 A0A0G2JS52 829 aa7.36□□□□□ -1.23
SCN2A-203ENST00000375437 NPM1P06748 294 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCN2A-203ENST00000375437 NEUROD1Q13562 356 aa7.33□□□□□ -1.24
SCN2A-203ENST00000375437 MYH16Q9H6N6 1097 aa7.32□□□□□ -1.24
SCN2A-203ENST00000375437 PLPPR3Q6T4P5 718 aa7.32□□□□□ -1.24
SCN2A-203ENST00000375437 ZRSR1Q15695 479 aaKnown RBP7.3□□□□□ -1.24
SCN2A-203ENST00000375437 HRCP23327 699 aa7.29□□□□□ -1.24
SCN2A-203ENST00000375437 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
SCN2A-203ENST00000375437 EIF5BO60841 1220 aaKnown RBP7.29□□□□□ -1.24
SCN2A-203ENST00000375437 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.28□□□□□ -1.24
SCN2A-203ENST00000375437 CCDC180Q9P1Z9 1646 aa7.28□□□□□ -1.24
SCN2A-203ENST00000375437 NCLP19338 710 aaKnown RBP7.28□□□□□ -1.24
SCN2A-203ENST00000375437 HAP1P54257 671 aaPredicted RBP7.28□□□□□ -1.24
SCN2A-203ENST00000375437 NPHP1O15259 732 aa7.27□□□□□ -1.25
SCN2A-203ENST00000375437 TRIM44Q96DX7 344 aaPredicted RBP7.27□□□□□ -1.25
SCN2A-203ENST00000375437 CHGAP10645 457 aaKnown RBP7.26□□□□□ -1.25
SCN2A-203ENST00000375437 TNNT2P45379 298 aaPredicted RBP7.26□□□□□ -1.25
SCN2A-203ENST00000375437 TULP1O00294 542 aaPredicted RBP7.25□□□□□ -1.25
SCN2A-203ENST00000375437 ACIN1Q9UKV3 1341 aaKnown RBP7.25□□□□□ -1.25
SCN2A-203ENST00000375437 C14orf37Q86TY3 774 aa7.24□□□□□ -1.25
SCN2A-203ENST00000375437 CASC1Q6TDU7 716 aa7.22□□□□□ -1.25
SCN2A-203ENST00000375437 ANP32EQ9BTT0 268 aa7.21□□□□□ -1.25
SCN2A-203ENST00000375437 GOLGA6L6A8MZA4 724 aa7.21□□□□□ -1.25
SCN2A-203ENST00000375437 ZNF777Q9ULD5 760 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-203ENST00000375437 L1TD1Q5T7N2 865 aaKnown RBP7.2□□□□□ -1.26
SCN2A-203ENST00000375437 WDR43Q15061 677 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCN2A-203ENST00000375437 GOLGA6L22H0YM25 854 aa7.2□□□□□ -1.26
SCN2A-203ENST00000375437 NCBP3Q53F19 620 aaKnown RBP7.2□□□□□ -1.26
SCN2A-203ENST00000375437 GOLGA2Q08379 1002 aa7.19□□□□□ -1.26
SCN2A-203ENST00000375437 KRI1Q8N9T8 703 aaKnown RBP7.18□□□□□ -1.26
SCN2A-203ENST00000375437 EIF4G2P78344 907 aaKnown RBP eCLIP7.18□□□□□ -1.26
SCN2A-203ENST00000375437 ZBTB7CA1YPR0 619 aa7.18□□□□□ -1.26
SCN2A-203ENST00000375437 ARXQ96QS3 562 aa7.18□□□□□ -1.26
SCN2A-203ENST00000375437 CLSTN1O94985 981 aa7.17□□□□□ -1.26
SCN2A-203ENST00000375437 NRDCO43847 1150 aa7.17□□□□□ -1.26
SCN2A-203ENST00000375437 BECN1Q14457 450 aa7.17□□□□□ -1.26
SCN2A-203ENST00000375437 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
SCN2A-203ENST00000375437 PPP1R15AO75807 674 aaPredicted RBP7.16□□□□□ -1.26
SCN2A-203ENST00000375437 KIAA2012Q0VF49 1180 aa7.14□□□□□ -1.27
SCN2A-203ENST00000375437 TMX4Q9H1E5 349 aaPredicted RBP7.14□□□□□ -1.27
SCN2A-203ENST00000375437 TONSLQ96HA7 1378 aa7.13□□□□□ -1.27
SCN2A-203ENST00000375437 PTMAP06454 111 aaKnown RBP7.12□□□□□ -1.27
SCN2A-203ENST00000375437 TMC1Q8TDI8 760 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms