RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
PLXNA3-201ENST00000369682 VWFP04275 2813 aa6.84□□□□□ -1.31
PLXNA3-201ENST00000369682 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
PLXNA3-201ENST00000369682 Q6ZSA8 131 aa6.82□□□□□ -1.32
PLXNA3-201ENST00000369682 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
PLXNA3-201ENST00000369682 TGP01266 2768 aa6.82□□□□□ -1.32
PLXNA3-201ENST00000369682 PLAC8Q9NZF1 115 aa6.81□□□□□ -1.32
PLXNA3-201ENST00000369682 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
PLXNA3-201ENST00000369682 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
PLXNA3-201ENST00000369682 KRTAP29-1A8MX34 341 aaPredicted RBP6.8□□□□□ -1.32
PLXNA3-201ENST00000369682 A6NN06 94 aa6.79□□□□□ -1.32
PLXNA3-201ENST00000369682 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
PLXNA3-201ENST00000369682 CELSR1Q9NYQ6 3014 aa6.79□□□□□ -1.32
PLXNA3-201ENST00000369682 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
PLXNA3-201ENST00000369682 PKD1L1Q8TDX9 2849 aa6.78□□□□□ -1.32
PLXNA3-201ENST00000369682 ROMO1P60602 79 aa6.78□□□□□ -1.32
PLXNA3-201ENST00000369682 LOC400499M0QZD8 3231 aa6.77□□□□□ -1.33
PLXNA3-201ENST00000369682 Q6ZR54 194 aa6.75□□□□□ -1.33
PLXNA3-201ENST00000369682 SPRR1BP22528 89 aa6.75□□□□□ -1.33
PLXNA3-201ENST00000369682 TENM4Q6N022 2769 aa6.74□□□□□ -1.33
PLXNA3-201ENST00000369682 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
PLXNA3-201ENST00000369682 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
PLXNA3-201ENST00000369682 M0R2T5 61 aa6.7□□□□□ -1.34
PLXNA3-201ENST00000369682 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
PLXNA3-201ENST00000369682 LAMA5O15230 3695 aa6.69□□□□□ -1.34
PLXNA3-201ENST00000369682 M0QZ58 72 aa6.69□□□□□ -1.34
PLXNA3-201ENST00000369682 R4GN34 69 aa6.66□□□□□ -1.34
PLXNA3-201ENST00000369682 DMDP11532 3685 aa6.66□□□□□ -1.34
PLXNA3-201ENST00000369682 ASPMQ8IZT6 3477 aa6.63□□□□□ -1.35
PLXNA3-201ENST00000369682 A0A0A0MQY5 61 aa6.63□□□□□ -1.35
PLXNA3-201ENST00000369682 NDUFAF8A1L188 74 aa6.63□□□□□ -1.35
PLXNA3-201ENST00000369682 SMG1Q96Q15 3661 aaKnown RBP6.62□□□□□ -1.35
PLXNA3-201ENST00000369682 SRRM2Q9UQ35 2752 aaKnown RBP6.61□□□□□ -1.35
PLXNA3-201ENST00000369682 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
PLXNA3-201ENST00000369682 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
PLXNA3-201ENST00000369682 Q5VSD8 79 aa6.59□□□□□ -1.35
PLXNA3-201ENST00000369682 CSMD1Q96PZ7 3565 aa6.58□□□□□ -1.36
PLXNA3-201ENST00000369682 LCE6AA0A183 80 aa6.56□□□□□ -1.36
PLXNA3-201ENST00000369682 NBPF19A0A087WUL8 3843 aa6.55□□□□□ -1.36
PLXNA3-201ENST00000369682 DCHS1Q96JQ0 3298 aa6.54□□□□□ -1.36
PLXNA3-201ENST00000369682 KRTAP13-2Q52LG2 175 aa6.51□□□□□ -1.37
PLXNA3-201ENST00000369682 KRTAP16-1A8MUX0 517 aa6.51□□□□□ -1.37
PLXNA3-201ENST00000369682 ZFHX4Q86UP3 3567 aa6.49□□□□□ -1.37
PLXNA3-201ENST00000369682 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
PLXNA3-201ENST00000369682 FBN1P35555 2871 aaKnown RBP6.48□□□□□ -1.37
PLXNA3-201ENST00000369682 RELNP78509 3460 aa6.48□□□□□ -1.37
PLXNA3-201ENST00000369682 TENM2Q9NT68 2774 aa6.48□□□□□ -1.37
PLXNA3-201ENST00000369682 A8MUU9 505 aa6.46□□□□□ -1.38
PLXNA3-201ENST00000369682 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
PLXNA3-201ENST00000369682 ASB16-AS1Q495Z4 193 aa6.42□□□□□ -1.38
PLXNA3-201ENST00000369682 KRTAP13-1Q8IUC0 172 aa6.39□□□□□ -1.39
PLXNA3-201ENST00000369682 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
PLXNA3-201ENST00000369682 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
PLXNA3-201ENST00000369682 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
PLXNA3-201ENST00000369682 ZFHX3Q15911 3703 aa6.37□□□□□ -1.39
PLXNA3-201ENST00000369682 FBN3Q75N90 2809 aa6.34□□□□□ -1.4
PLXNA3-201ENST00000369682 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
PLXNA3-201ENST00000369682 VPS13CQ709C8 3753 aa6.33□□□□□ -1.4
PLXNA3-201ENST00000369682 H0YAA0 97 aa6.32□□□□□ -1.4
PLXNA3-201ENST00000369682 SVEP1Q4LDE5 3571 aa6.3□□□□□ -1.4
PLXNA3-201ENST00000369682 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
PLXNA3-201ENST00000369682 OTOGQ6ZRI0 2925 aa6.23□□□□□ -1.41
PLXNA3-201ENST00000369682 CUBNO60494 3623 aa6.23□□□□□ -1.41
PLXNA3-201ENST00000369682 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
PLXNA3-201ENST00000369682 TRRAPQ9Y4A5 3859 aa6.16□□□□□ -1.42
PLXNA3-201ENST00000369682 A0A1B0GVY2 172 aa6.14□□□□□ -1.43
PLXNA3-201ENST00000369682 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
PLXNA3-201ENST00000369682 P0C880 135 aa6.09□□□□□ -1.43
PLXNA3-201ENST00000369682 AKAP9Q99996 3911 aa6.07□□□□□ -1.44
PLXNA3-201ENST00000369682 KRTAP1-4P0C5Y4 121 aa6.05□□□□□ -1.44
PLXNA3-201ENST00000369682 MUC3AQ02505 3323 aa6.05□□□□□ -1.44
PLXNA3-201ENST00000369682 BSNQ9UPA5 3926 aa6.01□□□□□ -1.45
PLXNA3-201ENST00000369682 TNP1P09430 55 aa6.01□□□□□ -1.45
PLXNA3-201ENST00000369682 XP32Q5T750 250 aa6□□□□□ -1.45
PLXNA3-201ENST00000369682 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
PLXNA3-201ENST00000369682 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
PLXNA3-201ENST00000369682 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
PLXNA3-201ENST00000369682 CSMD3Q7Z407 3707 aa5.89□□□□□ -1.47
PLXNA3-201ENST00000369682 CSMD2Q7Z408 3487 aa5.88□□□□□ -1.47
PLXNA3-201ENST00000369682 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
PLXNA3-201ENST00000369682 KRTAP21-3Q3LHN1 58 aa5.75□□□□□ -1.49
PLXNA3-201ENST00000369682 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
PLXNA3-201ENST00000369682 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
PLXNA3-201ENST00000369682 ZNF469Q96JG9 3925 aaPredicted RBP5.7□□□□□ -1.5
PLXNA3-201ENST00000369682 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
PLXNA3-201ENST00000369682 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
PLXNA3-201ENST00000369682 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
PLXNA3-201ENST00000369682 ANK3Q12955 4377 aaKnown RBP5.45□□□□□ -1.54
PLXNA3-201ENST00000369682 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
PLXNA3-201ENST00000369682 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
PLXNA3-201ENST00000369682 ALMS1Q8TCU4 4167 aa5.4□□□□□ -1.54
PLXNA3-201ENST00000369682 LYSTQ99698 3801 aa5.38□□□□□ -1.55
PLXNA3-201ENST00000369682 KRTAP3-2Q9BYR7 98 aa5.36□□□□□ -1.55
PLXNA3-201ENST00000369682 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
PLXNA3-201ENST00000369682 HECTD4Q9Y4D8 3996 aa5.28□□□□□ -1.56
PLXNA3-201ENST00000369682 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
PLXNA3-201ENST00000369682 DNAH3Q8TD57 4116 aa5.16□□□□□ -1.58
PLXNA3-201ENST00000369682 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
PLXNA3-201ENST00000369682 CMYA5Q8N3K9 4069 aa5.15□□□□□ -1.59
PLXNA3-201ENST00000369682 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 250.9 ms