RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 DMAC1Q96GE9 116 aa10.74□□□□□ -0.69
KRCC1-201ENST00000347055 A0A087WTM6 91 aa10.71□□□□□ -0.69
KRCC1-201ENST00000347055 LYSTQ99698 3801 aa10.71□□□□□ -0.7
KRCC1-201ENST00000347055 Q5W150 140 aa10.7□□□□□ -0.7
KRCC1-201ENST00000347055 SRRM2Q9UQ35 2752 aaKnown RBP10.7□□□□□ -0.7
KRCC1-201ENST00000347055 FAM229AH3BQW9 127 aa10.68□□□□□ -0.7
KRCC1-201ENST00000347055 SSBP3-AS1Q7Z2R9 100 aa10.68□□□□□ -0.7
KRCC1-201ENST00000347055 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
KRCC1-201ENST00000347055 RTL8CO15255 209 aa10.65□□□□□ -0.7
KRCC1-201ENST00000347055 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
KRCC1-201ENST00000347055 FBN1P35555 2871 aaKnown RBP10.63□□□□□ -0.71
KRCC1-201ENST00000347055 ALMS1Q8TCU4 4167 aa10.62□□□□□ -0.71
KRCC1-201ENST00000347055 NBEAL1Q6ZS30 2694 aa10.6□□□□□ -0.71
KRCC1-201ENST00000347055 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
KRCC1-201ENST00000347055 SPINK6Q6UWN8 80 aa10.6□□□□□ -0.71
KRCC1-201ENST00000347055 ANAPC11Q9NYG5 84 aa10.6□□□□□ -0.71
KRCC1-201ENST00000347055 NOTCH1P46531 2555 aa10.59□□□□□ -0.71
KRCC1-201ENST00000347055 IGKV2-30P06310 120 aa10.58□□□□□ -0.72
KRCC1-201ENST00000347055 SPATA8Q6RVD6 105 aa10.58□□□□□ -0.72
KRCC1-201ENST00000347055 A0A1B0GU69 56 aa10.57□□□□□ -0.72
KRCC1-201ENST00000347055 LINC00313P59037 77 aa10.57□□□□□ -0.72
KRCC1-201ENST00000347055 PLA2G1BP04054 148 aaKnown RBP10.55□□□□□ -0.72
KRCC1-201ENST00000347055 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
KRCC1-201ENST00000347055 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
KRCC1-201ENST00000347055 UQCR11O14957 56 aa10.48□□□□□ -0.73
KRCC1-201ENST00000347055 STAB2Q8WWQ8 2551 aa10.48□□□□□ -0.73
KRCC1-201ENST00000347055 VPS13DQ5THJ4 4388 aa10.47□□□□□ -0.73
KRCC1-201ENST00000347055 PLECQ15149 4684 aaKnown RBP10.45□□□□□ -0.74
KRCC1-201ENST00000347055 COL6A5A8TX70 2615 aa10.45□□□□□ -0.74
KRCC1-201ENST00000347055 DNAH17Q9UFH2 4485 aa10.44□□□□□ -0.74
KRCC1-201ENST00000347055 MIR22HGQ0VDD5 57 aa10.44□□□□□ -0.74
KRCC1-201ENST00000347055 KRTAP16-1A8MUX0 517 aa10.43□□□□□ -0.74
KRCC1-201ENST00000347055 DNAH7Q8WXX0 4024 aa10.42□□□□□ -0.74
KRCC1-201ENST00000347055 COL7A1Q02388 2944 aa10.4□□□□□ -0.74
KRCC1-201ENST00000347055 HECTD4Q9Y4D8 3996 aa10.4□□□□□ -0.74
KRCC1-201ENST00000347055 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
KRCC1-201ENST00000347055 C1orf134Q5TEV5 83 aa10.37□□□□□ -0.75
KRCC1-201ENST00000347055 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
KRCC1-201ENST00000347055 KRTAP13-2Q52LG2 175 aa10.31□□□□□ -0.76
KRCC1-201ENST00000347055 PRAC1Q96KF2 57 aa10.3□□□□□ -0.76
KRCC1-201ENST00000347055 LINC01554Q52M75 96 aa10.29□□□□□ -0.76
KRCC1-201ENST00000347055 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
KRCC1-201ENST00000347055 PRKDCP78527 4128 aaKnown RBP10.26□□□□□ -0.77
KRCC1-201ENST00000347055 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
KRCC1-201ENST00000347055 MGAM2Q2M2H8 2515 aa10.24□□□□□ -0.77
KRCC1-201ENST00000347055 ADM2Q7Z4H4 148 aa10.22□□□□□ -0.77
KRCC1-201ENST00000347055 Q6ZSA8 131 aa10.2□□□□□ -0.78
KRCC1-201ENST00000347055 DNAH2Q9P225 4427 aa10.2□□□□□ -0.78
KRCC1-201ENST00000347055 STARD9Q9P2P6 4700 aa10.19□□□□□ -0.78
KRCC1-201ENST00000347055 SPINK1P00995 79 aa10.17□□□□□ -0.78
KRCC1-201ENST00000347055 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
KRCC1-201ENST00000347055 LY6G6CO95867 125 aa10.16□□□□□ -0.78
KRCC1-201ENST00000347055 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
KRCC1-201ENST00000347055 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
KRCC1-201ENST00000347055 FBN3Q75N90 2809 aa10.12□□□□□ -0.79
KRCC1-201ENST00000347055 DNAH6Q9C0G6 4158 aa10.11□□□□□ -0.79
KRCC1-201ENST00000347055 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
KRCC1-201ENST00000347055 TYMSOSQ8TAI1 123 aa10.06□□□□□ -0.8
KRCC1-201ENST00000347055 DNAH11Q96DT5 4516 aa10.05□□□□□ -0.8
KRCC1-201ENST00000347055 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
KRCC1-201ENST00000347055 MEGF8Q7Z7M0 2845 aa10.02□□□□□ -0.8
KRCC1-201ENST00000347055 KRTAP10-1P60331 282 aa10.01□□□□□ -0.81
KRCC1-201ENST00000347055 DNAH5Q8TE73 4624 aa9.99□□□□□ -0.81
KRCC1-201ENST00000347055 Q8N1X5 172 aa9.99□□□□□ -0.81
KRCC1-201ENST00000347055 KMT2AQ03164 3969 aa9.99□□□□□ -0.81
KRCC1-201ENST00000347055 A8MUU9 505 aa9.98□□□□□ -0.81
KRCC1-201ENST00000347055 H0YAA0 97 aa9.95□□□□□ -0.82
KRCC1-201ENST00000347055 LINC00304Q8N9R0 145 aa9.94□□□□□ -0.82
KRCC1-201ENST00000347055 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
KRCC1-201ENST00000347055 A0A1B0GU33 70 aa9.91□□□□□ -0.82
KRCC1-201ENST00000347055 H1FX-AS1Q4G0G2 97 aa9.89□□□□□ -0.83
KRCC1-201ENST00000347055 TGP01266 2768 aa9.87□□□□□ -0.83
KRCC1-201ENST00000347055 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
KRCC1-201ENST00000347055 LRP1BQ9NZR2 4599 aa9.84□□□□□ -0.83
KRCC1-201ENST00000347055 PKD1P98161 4303 aa9.81□□□□□ -0.84
KRCC1-201ENST00000347055 KRTAP3-1Q9BYR8 98 aa9.8□□□□□ -0.84
KRCC1-201ENST00000347055 K7ERS5 55 aa9.79□□□□□ -0.84
KRCC1-201ENST00000347055 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.85
KRCC1-201ENST00000347055 COX6B2Q6YFQ2 88 aa9.71□□□□□ -0.85
KRCC1-201ENST00000347055 VPS13BQ7Z7G8 4022 aa9.7□□□□□ -0.86
KRCC1-201ENST00000347055 FAT2Q9NYQ8 4349 aa9.69□□□□□ -0.86
KRCC1-201ENST00000347055 H3BS24 57 aa9.66□□□□□ -0.86
KRCC1-201ENST00000347055 C9orf92A6NGG3 77 aa9.65□□□□□ -0.86
KRCC1-201ENST00000347055 ROMO1P60602 79 aa9.64□□□□□ -0.87
KRCC1-201ENST00000347055 PKHD1L1Q86WI1 4243 aa9.56□□□□□ -0.88
KRCC1-201ENST00000347055 RPL37P61927 97 aaKnown RBP9.51□□□□□ -0.89
KRCC1-201ENST00000347055 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
KRCC1-201ENST00000347055 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
KRCC1-201ENST00000347055 APOBP04114 4563 aaKnown RBP9.42□□□□□ -0.9
KRCC1-201ENST00000347055 HYDINQ4G0P3 5121 aa9.4□□□□□ -0.9
KRCC1-201ENST00000347055 PKHD1P08F94 4074 aa9.4□□□□□ -0.9
KRCC1-201ENST00000347055 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
KRCC1-201ENST00000347055 SMR3BP02814 79 aaPredicted RBP9.37□□□□□ -0.91
KRCC1-201ENST00000347055 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
KRCC1-201ENST00000347055 A0A1B0GVY2 172 aa9.32□□□□□ -0.92
KRCC1-201ENST00000347055 S4R3F8 94 aa9.32□□□□□ -0.92
KRCC1-201ENST00000347055 KRTAP13-4Q3LI77 160 aa9.29□□□□□ -0.92
KRCC1-201ENST00000347055 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
KRCC1-201ENST00000347055 DYNC1H1Q14204 4646 aaKnown RBP9.26□□□□□ -0.93
KRCC1-201ENST00000347055 P0C880 135 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms