RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
TRIO-202ENST00000344204 KRTAP24-1Q3LI83 254 aa8□□□□□ -1.13
TRIO-202ENST00000344204 C20orf166-AS1Q96NR2 134 aa7.99□□□□□ -1.13
TRIO-202ENST00000344204 DNAH14Q0VDD8 3507 aa7.98□□□□□ -1.13
TRIO-202ENST00000344204 PLAC8Q9NZF1 115 aa7.97□□□□□ -1.13
TRIO-202ENST00000344204 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
TRIO-202ENST00000344204 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
TRIO-202ENST00000344204 R4GN34 69 aa7.9□□□□□ -1.14
TRIO-202ENST00000344204 PKD1L1Q8TDX9 2849 aa7.88□□□□□ -1.15
TRIO-202ENST00000344204 CELSR1Q9NYQ6 3014 aa7.88□□□□□ -1.15
TRIO-202ENST00000344204 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
TRIO-202ENST00000344204 CFAP47Q6ZTR5 3102 aa7.84□□□□□ -1.15
TRIO-202ENST00000344204 VWFP04275 2813 aa7.84□□□□□ -1.15
TRIO-202ENST00000344204 SMR3BP02814 79 aaPredicted RBP7.83□□□□□ -1.16
TRIO-202ENST00000344204 Q6ZSA8 131 aa7.83□□□□□ -1.16
TRIO-202ENST00000344204 M0QZ58 72 aa7.82□□□□□ -1.16
TRIO-202ENST00000344204 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
TRIO-202ENST00000344204 UNC80Q8N2C7 3258 aa7.82□□□□□ -1.16
TRIO-202ENST00000344204 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
TRIO-202ENST00000344204 KRTAP1-5Q9BYS1 174 aa7.8□□□□□ -1.16
TRIO-202ENST00000344204 BRCA2P51587 3418 aa7.8□□□□□ -1.16
TRIO-202ENST00000344204 LAMA3Q16787 3333 aa7.8□□□□□ -1.16
TRIO-202ENST00000344204 TENM4Q6N022 2769 aa7.79□□□□□ -1.16
TRIO-202ENST00000344204 USP34Q70CQ2 3546 aa7.75□□□□□ -1.17
TRIO-202ENST00000344204 H0YAA0 97 aa7.71□□□□□ -1.17
TRIO-202ENST00000344204 TENM2Q9NT68 2774 aa7.68□□□□□ -1.18
TRIO-202ENST00000344204 KRTAP7-1Q8IUC3 87 aa7.67□□□□□ -1.18
TRIO-202ENST00000344204 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
TRIO-202ENST00000344204 VCANP13611 3396 aa7.61□□□□□ -1.19
TRIO-202ENST00000344204 J3QL48 77 aa7.6□□□□□ -1.19
TRIO-202ENST00000344204 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
TRIO-202ENST00000344204 COL7A1Q02388 2944 aa7.6□□□□□ -1.19
TRIO-202ENST00000344204 P0C880 135 aa7.6□□□□□ -1.19
TRIO-202ENST00000344204 WDFY3Q8IZQ1 3526 aa7.57□□□□□ -1.2
TRIO-202ENST00000344204 SPTBN5Q9NRC6 3674 aaKnown RBP7.53□□□□□ -1.2
TRIO-202ENST00000344204 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
TRIO-202ENST00000344204 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
TRIO-202ENST00000344204 CDH23Q9H251 3354 aa7.51□□□□□ -1.21
TRIO-202ENST00000344204 MEGF8Q7Z7M0 2845 aa7.49□□□□□ -1.21
TRIO-202ENST00000344204 MYO15AQ9UKN7 3530 aa7.46□□□□□ -1.22
TRIO-202ENST00000344204 KRTAP10-1P60331 282 aa7.45□□□□□ -1.22
TRIO-202ENST00000344204 FBN3Q75N90 2809 aa7.45□□□□□ -1.22
TRIO-202ENST00000344204 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
TRIO-202ENST00000344204 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
TRIO-202ENST00000344204 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
TRIO-202ENST00000344204 DMDP11532 3685 aa7.38□□□□□ -1.23
TRIO-202ENST00000344204 FBN1P35555 2871 aaKnown RBP7.38□□□□□ -1.23
TRIO-202ENST00000344204 SMG1Q96Q15 3661 aaKnown RBP7.37□□□□□ -1.23
TRIO-202ENST00000344204 M0R2T5 61 aa7.36□□□□□ -1.23
TRIO-202ENST00000344204 EYSQ5T1H1 3165 aa7.34□□□□□ -1.23
TRIO-202ENST00000344204 SPEGQ15772 3267 aa7.34□□□□□ -1.24
TRIO-202ENST00000344204 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
TRIO-202ENST00000344204 TNP1P09430 55 aa7.3□□□□□ -1.24
TRIO-202ENST00000344204 OTOGQ6ZRI0 2925 aa7.3□□□□□ -1.24
TRIO-202ENST00000344204 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
TRIO-202ENST00000344204 LAMA5O15230 3695 aa7.23□□□□□ -1.25
TRIO-202ENST00000344204 LOC400499M0QZD8 3231 aa7.22□□□□□ -1.25
TRIO-202ENST00000344204 ZFHX4Q86UP3 3567 aa7.2□□□□□ -1.26
TRIO-202ENST00000344204 SPENQ96T58 3664 aaKnown RBP7.2□□□□□ -1.26
TRIO-202ENST00000344204 SZT2Q5T011 3432 aa7.19□□□□□ -1.26
TRIO-202ENST00000344204 Q5VSD8 79 aa7.18□□□□□ -1.26
TRIO-202ENST00000344204 KRTAP10-8P60410 259 aa7.18□□□□□ -1.26
TRIO-202ENST00000344204 ASPMQ8IZT6 3477 aa7.18□□□□□ -1.26
TRIO-202ENST00000344204 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
TRIO-202ENST00000344204 VPS13CQ709C8 3753 aa7.15□□□□□ -1.27
TRIO-202ENST00000344204 AKAP9Q99996 3911 aa7.14□□□□□ -1.27
TRIO-202ENST00000344204 CSMD1Q96PZ7 3565 aa7.13□□□□□ -1.27
TRIO-202ENST00000344204 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
TRIO-202ENST00000344204 DCHS1Q96JQ0 3298 aa7.05□□□□□ -1.28
TRIO-202ENST00000344204 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
TRIO-202ENST00000344204 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
TRIO-202ENST00000344204 RELNP78509 3460 aa7□□□□□ -1.29
TRIO-202ENST00000344204 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
TRIO-202ENST00000344204 TRRAPQ9Y4A5 3859 aa6.88□□□□□ -1.31
TRIO-202ENST00000344204 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
TRIO-202ENST00000344204 XP32Q5T750 250 aa6.86□□□□□ -1.31
TRIO-202ENST00000344204 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
TRIO-202ENST00000344204 INE1O15225 51 aa6.8□□□□□ -1.32
TRIO-202ENST00000344204 SVEP1Q4LDE5 3571 aa6.72□□□□□ -1.33
TRIO-202ENST00000344204 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
TRIO-202ENST00000344204 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
TRIO-202ENST00000344204 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
TRIO-202ENST00000344204 CUBNO60494 3623 aa6.64□□□□□ -1.35
TRIO-202ENST00000344204 BSNQ9UPA5 3926 aa6.59□□□□□ -1.35
TRIO-202ENST00000344204 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
TRIO-202ENST00000344204 A0A1B0GVY2 172 aa6.46□□□□□ -1.37
TRIO-202ENST00000344204 LYSTQ99698 3801 aa6.41□□□□□ -1.38
TRIO-202ENST00000344204 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
TRIO-202ENST00000344204 DNAH3Q8TD57 4116 aa6.4□□□□□ -1.38
TRIO-202ENST00000344204 MUC3AQ02505 3323 aa6.4□□□□□ -1.39
TRIO-202ENST00000344204 HECTD4Q9Y4D8 3996 aa6.39□□□□□ -1.39
TRIO-202ENST00000344204 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
TRIO-202ENST00000344204 CMYA5Q8N3K9 4069 aa6.31□□□□□ -1.4
TRIO-202ENST00000344204 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
TRIO-202ENST00000344204 CSMD2Q7Z408 3487 aa6.24□□□□□ -1.41
TRIO-202ENST00000344204 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
TRIO-202ENST00000344204 ZNF469Q96JG9 3925 aaPredicted RBP6.19□□□□□ -1.42
TRIO-202ENST00000344204 DNAH7Q8WXX0 4024 aa6.16□□□□□ -1.42
TRIO-202ENST00000344204 ANK2Q01484 3957 aa6.01□□□□□ -1.45
TRIO-202ENST00000344204 DNAH2Q9P225 4427 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms