RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 CHD9Q3L8U1 2897 aa2.9□□□□□ -1.95
TNRC6B-202ENST00000335727 XIRP2A4UGR9 3374 aa2.89□□□□□ -1.95
TNRC6B-202ENST00000335727 KRTAP10-8P60410 259 aa2.89□□□□□ -1.95
TNRC6B-202ENST00000335727 KRTAP13-3Q3SY46 172 aa2.89□□□□□ -1.95
TNRC6B-202ENST00000335727 Q6ZRN7 208 aaPredicted RBP2.89□□□□□ -1.95
TNRC6B-202ENST00000335727 ADGRG4Q8IZF6 3080 aa2.89□□□□□ -1.95
TNRC6B-202ENST00000335727 KRTAP10-3P60369 221 aa2.89□□□□□ -1.95
TNRC6B-202ENST00000335727 RANBP2P49792 3224 aaKnown RBP2.88□□□□□ -1.95
TNRC6B-202ENST00000335727 KRTAP13-1Q8IUC0 172 aa2.88□□□□□ -1.95
TNRC6B-202ENST00000335727 LAMA1P25391 3075 aa2.87□□□□□ -1.95
TNRC6B-202ENST00000335727 ZFHX3Q15911 3703 aa2.86□□□□□ -1.95
TNRC6B-202ENST00000335727 TGP01266 2768 aa2.86□□□□□ -1.95
TNRC6B-202ENST00000335727 TENM3Q9P273 2699 aa2.86□□□□□ -1.95
TNRC6B-202ENST00000335727 CHD7Q9P2D1 2997 aa2.85□□□□□ -1.95
TNRC6B-202ENST00000335727 COL6A3P12111 3177 aa2.85□□□□□ -1.95
TNRC6B-202ENST00000335727 DMXL1Q9Y485 3027 aa2.85□□□□□ -1.95
TNRC6B-202ENST00000335727 TENM4Q6N022 2769 aa2.84□□□□□ -1.95
TNRC6B-202ENST00000335727 LRBAP50851 2863 aa2.84□□□□□ -1.95
TNRC6B-202ENST00000335727 ATMQ13315 3056 aa2.84□□□□□ -1.96
TNRC6B-202ENST00000335727 FLNCQ14315 2725 aa2.84□□□□□ -1.96
TNRC6B-202ENST00000335727 NIPBLQ6KC79 2804 aaeCLIP2.83□□□□□ -1.96
TNRC6B-202ENST00000335727 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
TNRC6B-202ENST00000335727 CDH23Q9H251 3354 aa2.82□□□□□ -1.96
TNRC6B-202ENST00000335727 SRRM2Q9UQ35 2752 aaKnown RBP2.82□□□□□ -1.96
TNRC6B-202ENST00000335727 LAMA3Q16787 3333 aa2.81□□□□□ -1.96
TNRC6B-202ENST00000335727 DCHS2Q6V1P9 2916 aa2.81□□□□□ -1.96
TNRC6B-202ENST00000335727 NF1P21359 2839 aa2.81□□□□□ -1.96
TNRC6B-202ENST00000335727 TNRC18O15417 2968 aaPredicted RBP2.8□□□□□ -1.96
TNRC6B-202ENST00000335727 ZZEF1O43149 2961 aa2.8□□□□□ -1.96
TNRC6B-202ENST00000335727 USP34Q70CQ2 3546 aa2.79□□□□□ -1.96
TNRC6B-202ENST00000335727 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
TNRC6B-202ENST00000335727 KRTAP21-3Q3LHN1 58 aa2.77□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP1-3Q8IUG1 177 aa2.77□□□□□ -1.97
TNRC6B-202ENST00000335727 VCANP13611 3396 aa2.77□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
TNRC6B-202ENST00000335727 XP32Q5T750 250 aa2.76□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP10-2P60368 255 aa2.75□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP10-1P60331 282 aa2.74□□□□□ -1.97
TNRC6B-202ENST00000335727 TENM1Q9UKZ4 2725 aa2.74□□□□□ -1.97
TNRC6B-202ENST00000335727 SPEGQ15772 3267 aa2.73□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP1-1Q07627 177 aa2.73□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP7-1Q8IUC3 87 aa2.72□□□□□ -1.97
TNRC6B-202ENST00000335727 CELSR1Q9NYQ6 3014 aa2.72□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
TNRC6B-202ENST00000335727 KRTAP1-5Q9BYS1 174 aa2.68□□□□□ -1.98
TNRC6B-202ENST00000335727 PKD1L1Q8TDX9 2849 aa2.68□□□□□ -1.98
TNRC6B-202ENST00000335727 KRTAP13-2Q52LG2 175 aa2.68□□□□□ -1.98
TNRC6B-202ENST00000335727 SZT2Q5T011 3432 aa2.67□□□□□ -1.98
TNRC6B-202ENST00000335727 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
TNRC6B-202ENST00000335727 ZANQ9Y493 2812 aa2.64□□□□□ -1.99
TNRC6B-202ENST00000335727 FBN2P35556 2912 aa2.64□□□□□ -1.99
TNRC6B-202ENST00000335727 DCHS1Q96JQ0 3298 aa2.63□□□□□ -1.99
TNRC6B-202ENST00000335727 DNAH14Q0VDD8 3507 aa2.63□□□□□ -1.99
TNRC6B-202ENST00000335727 EYSQ5T1H1 3165 aa2.63□□□□□ -1.99
TNRC6B-202ENST00000335727 BRCA2P51587 3418 aa2.62□□□□□ -1.99
TNRC6B-202ENST00000335727 LOC400499M0QZD8 3231 aa2.61□□□□□ -1.99
TNRC6B-202ENST00000335727 NBPF19A0A087WUL8 3843 aa2.6□□□□□ -1.99
TNRC6B-202ENST00000335727 VWFP04275 2813 aa2.57□□□□□ -2
TNRC6B-202ENST00000335727 MYO15AQ9UKN7 3530 aa2.57□□□□□ -2
TNRC6B-202ENST00000335727 TENM2Q9NT68 2774 aa2.57□□□□□ -2
TNRC6B-202ENST00000335727 KRTAP10-6P60371 365 aaPredicted RBP2.56□□□□□ -2
TNRC6B-202ENST00000335727 A0A1B0GVY2 172 aa2.56□□□□□ -2
TNRC6B-202ENST00000335727 SPTBN5Q9NRC6 3674 aaKnown RBP2.55□□□□□ -2
TNRC6B-202ENST00000335727 COL7A1Q02388 2944 aa2.54□□□□□ -2
TNRC6B-202ENST00000335727 DMDP11532 3685 aa2.53□□□□□ -2
TNRC6B-202ENST00000335727 MXRA5Q9NR99 2828 aa2.52□□□□□ -2.01
TNRC6B-202ENST00000335727 KRTAP1-4P0C5Y4 121 aa2.51□□□□□ -2.01
TNRC6B-202ENST00000335727 AKAP9Q99996 3911 aa2.51□□□□□ -2.01
TNRC6B-202ENST00000335727 FBN3Q75N90 2809 aa2.48□□□□□ -2.01
TNRC6B-202ENST00000335727 ZFHX4Q86UP3 3567 aa2.48□□□□□ -2.01
TNRC6B-202ENST00000335727 KRTAP3-1Q9BYR8 98 aa2.48□□□□□ -2.01
TNRC6B-202ENST00000335727 SPENQ96T58 3664 aaKnown RBP2.47□□□□□ -2.01
TNRC6B-202ENST00000335727 FBN1P35555 2871 aaKnown RBP2.45□□□□□ -2.02
TNRC6B-202ENST00000335727 ASPMQ8IZT6 3477 aa2.45□□□□□ -2.02
TNRC6B-202ENST00000335727 SMG1Q96Q15 3661 aaKnown RBP2.44□□□□□ -2.02
TNRC6B-202ENST00000335727 KRTAP3-2Q9BYR7 98 aa2.44□□□□□ -2.02
TNRC6B-202ENST00000335727 WDFY3Q8IZQ1 3526 aa2.43□□□□□ -2.02
TNRC6B-202ENST00000335727 HRNRQ86YZ3 2850 aaPredicted RBP2.43□□□□□ -2.02
TNRC6B-202ENST00000335727 KRTAP19-4Q3LI73 84 aa2.42□□□□□ -2.02
TNRC6B-202ENST00000335727 OTOGQ6ZRI0 2925 aa2.42□□□□□ -2.02
TNRC6B-202ENST00000335727 KRTAP10-12P60413 245 aa2.42□□□□□ -2.02
TNRC6B-202ENST00000335727 MEGF8Q7Z7M0 2845 aa2.42□□□□□ -2.02
TNRC6B-202ENST00000335727 MT3P25713 68 aa2.41□□□□□ -2.02
TNRC6B-202ENST00000335727 VPS13CQ709C8 3753 aa2.38□□□□□ -2.03
TNRC6B-202ENST00000335727 DNAH1Q9P2D7 4330 aa2.35□□□□□ -2.03
TNRC6B-202ENST00000335727 RELNP78509 3460 aa2.35□□□□□ -2.03
TNRC6B-202ENST00000335727 KRTAP3-3Q9BYR6 98 aa2.35□□□□□ -2.03
TNRC6B-202ENST00000335727 HUWE1Q7Z6Z7 4374 aaKnown RBP2.34□□□□□ -2.03
TNRC6B-202ENST00000335727 CMYA5Q8N3K9 4069 aa2.33□□□□□ -2.04
TNRC6B-202ENST00000335727 CRCT1Q9UGL9 99 aa2.33□□□□□ -2.04
TNRC6B-202ENST00000335727 TRRAPQ9Y4A5 3859 aa2.33□□□□□ -2.04
TNRC6B-202ENST00000335727 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
TNRC6B-202ENST00000335727 ANK3Q12955 4377 aaKnown RBP2.33□□□□□ -2.04
TNRC6B-202ENST00000335727 ALMS1Q8TCU4 4167 aa2.32□□□□□ -2.04
TNRC6B-202ENST00000335727 LAMA5O15230 3695 aa2.31□□□□□ -2.04
TNRC6B-202ENST00000335727 DNAH10Q8IVF4 4471 aa2.31□□□□□ -2.04
TNRC6B-202ENST00000335727 CUBNO60494 3623 aa2.31□□□□□ -2.04
TNRC6B-202ENST00000335727 DNAH11Q96DT5 4516 aa2.28□□□□□ -2.04
TNRC6B-202ENST00000335727 KRTAP10-7P60409 375 aaPredicted RBP2.27□□□□□ -2.05
TNRC6B-202ENST00000335727 DNAH2Q9P225 4427 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms