RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 TGP01266 2768 aa9.37□□□□□ -0.91
PDZD8-201ENST00000334464 TNP1P09430 55 aa9.36□□□□□ -0.91
PDZD8-201ENST00000334464 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
PDZD8-201ENST00000334464 PP632Q6XCG6 107 aa9.34□□□□□ -0.91
PDZD8-201ENST00000334464 PDZD2O15018 2839 aa9.32□□□□□ -0.92
PDZD8-201ENST00000334464 KRTAP13-1Q8IUC0 172 aa9.32□□□□□ -0.92
PDZD8-201ENST00000334464 LAMA1P25391 3075 aa9.31□□□□□ -0.92
PDZD8-201ENST00000334464 REV3LO60673 3130 aa9.27□□□□□ -0.93
PDZD8-201ENST00000334464 HTTP42858 3142 aa9.27□□□□□ -0.93
PDZD8-201ENST00000334464 KRTAP13-2Q52LG2 175 aa9.26□□□□□ -0.93
PDZD8-201ENST00000334464 KRTAP21-3Q3LHN1 58 aa9.26□□□□□ -0.93
PDZD8-201ENST00000334464 MKI67P46013 3256 aaKnown RBP9.24□□□□□ -0.93
PDZD8-201ENST00000334464 A8MU10 97 aa9.22□□□□□ -0.93
PDZD8-201ENST00000334464 LAMA3Q16787 3333 aa9.21□□□□□ -0.94
PDZD8-201ENST00000334464 MXRA5Q9NR99 2828 aa9.19□□□□□ -0.94
PDZD8-201ENST00000334464 FBN2P35556 2912 aa9.19□□□□□ -0.94
PDZD8-201ENST00000334464 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
PDZD8-201ENST00000334464 PKD1L1Q8TDX9 2849 aa9.18□□□□□ -0.94
PDZD8-201ENST00000334464 VWFP04275 2813 aa9.16□□□□□ -0.94
PDZD8-201ENST00000334464 ATMQ13315 3056 aa9.15□□□□□ -0.94
PDZD8-201ENST00000334464 FREM2Q5SZK8 3169 aa9.15□□□□□ -0.94
PDZD8-201ENST00000334464 XIRP2A4UGR9 3374 aa9.13□□□□□ -0.95
PDZD8-201ENST00000334464 C10orf95Q9H7T3 257 aa9.1□□□□□ -0.95
PDZD8-201ENST00000334464 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
PDZD8-201ENST00000334464 HRNRQ86YZ3 2850 aaPredicted RBP9.1□□□□□ -0.95
PDZD8-201ENST00000334464 BOD1L1Q8NFC6 3051 aa9.09□□□□□ -0.95
PDZD8-201ENST00000334464 ADGRG4Q8IZF6 3080 aa9.04□□□□□ -0.96
PDZD8-201ENST00000334464 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
PDZD8-201ENST00000334464 USP34Q70CQ2 3546 aa9.02□□□□□ -0.97
PDZD8-201ENST00000334464 PRO2289Q9P1D8 64 aa8.98□□□□□ -0.97
PDZD8-201ENST00000334464 CELSR1Q9NYQ6 3014 aa8.95□□□□□ -0.98
PDZD8-201ENST00000334464 BRCA2P51587 3418 aa8.95□□□□□ -0.98
PDZD8-201ENST00000334464 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
PDZD8-201ENST00000334464 COL6A3P12111 3177 aa8.94□□□□□ -0.98
PDZD8-201ENST00000334464 CELSR3Q9NYQ7 3312 aa8.93□□□□□ -0.98
PDZD8-201ENST00000334464 XP32Q5T750 250 aa8.9□□□□□ -0.98
PDZD8-201ENST00000334464 SRRM2Q9UQ35 2752 aaKnown RBP8.9□□□□□ -0.99
PDZD8-201ENST00000334464 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
PDZD8-201ENST00000334464 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
PDZD8-201ENST00000334464 DMXL1Q9Y485 3027 aa8.82□□□□□ -1
PDZD8-201ENST00000334464 P0C880 135 aa8.79□□□□□ -1
PDZD8-201ENST00000334464 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
PDZD8-201ENST00000334464 H0YAA0 97 aa8.75□□□□□ -1.01
PDZD8-201ENST00000334464 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
PDZD8-201ENST00000334464 KRTAP10-10P60014 251 aa8.65□□□□□ -1.03
PDZD8-201ENST00000334464 CDH23Q9H251 3354 aa8.64□□□□□ -1.03
PDZD8-201ENST00000334464 VCANP13611 3396 aa8.63□□□□□ -1.03
PDZD8-201ENST00000334464 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
PDZD8-201ENST00000334464 CFAP47Q6ZTR5 3102 aa8.58□□□□□ -1.04
PDZD8-201ENST00000334464 DNAH14Q0VDD8 3507 aa8.55□□□□□ -1.04
PDZD8-201ENST00000334464 A0A1B0GVY2 172 aa8.51□□□□□ -1.05
PDZD8-201ENST00000334464 EYSQ5T1H1 3165 aa8.47□□□□□ -1.05
PDZD8-201ENST00000334464 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
PDZD8-201ENST00000334464 MEGF8Q7Z7M0 2845 aa8.42□□□□□ -1.06
PDZD8-201ENST00000334464 SPEGQ15772 3267 aa8.4□□□□□ -1.06
PDZD8-201ENST00000334464 SZT2Q5T011 3432 aa8.39□□□□□ -1.07
PDZD8-201ENST00000334464 FBN3Q75N90 2809 aa8.33□□□□□ -1.08
PDZD8-201ENST00000334464 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
PDZD8-201ENST00000334464 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
PDZD8-201ENST00000334464 SPTBN5Q9NRC6 3674 aaKnown RBP8.28□□□□□ -1.08
PDZD8-201ENST00000334464 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
PDZD8-201ENST00000334464 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
PDZD8-201ENST00000334464 KRTAP12-2P59991 146 aa8.16□□□□□ -1.1
PDZD8-201ENST00000334464 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
PDZD8-201ENST00000334464 LOC400499M0QZD8 3231 aa8.05□□□□□ -1.12
PDZD8-201ENST00000334464 WDFY3Q8IZQ1 3526 aa8.02□□□□□ -1.13
PDZD8-201ENST00000334464 ZFHX4Q86UP3 3567 aa7.99□□□□□ -1.13
PDZD8-201ENST00000334464 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
PDZD8-201ENST00000334464 DCHS1Q96JQ0 3298 aa7.89□□□□□ -1.15
PDZD8-201ENST00000334464 OTOGQ6ZRI0 2925 aa7.88□□□□□ -1.15
PDZD8-201ENST00000334464 INE1O15225 51 aa7.84□□□□□ -1.15
PDZD8-201ENST00000334464 DMDP11532 3685 aa7.78□□□□□ -1.16
PDZD8-201ENST00000334464 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
PDZD8-201ENST00000334464 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.18
PDZD8-201ENST00000334464 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
PDZD8-201ENST00000334464 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.18
PDZD8-201ENST00000334464 RELNP78509 3460 aa7.63□□□□□ -1.19
PDZD8-201ENST00000334464 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
PDZD8-201ENST00000334464 LAMA5O15230 3695 aa7.61□□□□□ -1.19
PDZD8-201ENST00000334464 SMG1Q96Q15 3661 aaKnown RBP7.58□□□□□ -1.2
PDZD8-201ENST00000334464 KRTAP23-1A1A580 65 aa7.57□□□□□ -1.2
PDZD8-201ENST00000334464 ASPMQ8IZT6 3477 aa7.57□□□□□ -1.2
PDZD8-201ENST00000334464 VPS13CQ709C8 3753 aa7.39□□□□□ -1.23
PDZD8-201ENST00000334464 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
PDZD8-201ENST00000334464 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
PDZD8-201ENST00000334464 CSMD1Q96PZ7 3565 aa7.33□□□□□ -1.24
PDZD8-201ENST00000334464 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
PDZD8-201ENST00000334464 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
PDZD8-201ENST00000334464 AKAP9Q99996 3911 aa7.2□□□□□ -1.26
PDZD8-201ENST00000334464 MUC3AQ02505 3323 aa7.18□□□□□ -1.26
PDZD8-201ENST00000334464 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
PDZD8-201ENST00000334464 ALMS1Q8TCU4 4167 aa7.13□□□□□ -1.27
PDZD8-201ENST00000334464 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
PDZD8-201ENST00000334464 SVEP1Q4LDE5 3571 aa7.04□□□□□ -1.28
PDZD8-201ENST00000334464 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
PDZD8-201ENST00000334464 CUBNO60494 3623 aa7.01□□□□□ -1.29
PDZD8-201ENST00000334464 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
PDZD8-201ENST00000334464 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
PDZD8-201ENST00000334464 BSNQ9UPA5 3926 aa6.95□□□□□ -1.3
PDZD8-201ENST00000334464 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms