RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 COL12A1Q99715 3063 aa5.97□□□□□ -1.45
SPTBN1-201ENST00000333896 RPS29P62273 56 aaKnown RBP5.95□□□□□ -1.46
SPTBN1-201ENST00000333896 LAMA1P25391 3075 aa5.95□□□□□ -1.46
SPTBN1-201ENST00000333896 TNP1P09430 55 aa5.95□□□□□ -1.46
SPTBN1-201ENST00000333896 DMXL1Q9Y485 3027 aa5.94□□□□□ -1.46
SPTBN1-201ENST00000333896 XIRP2A4UGR9 3374 aa5.93□□□□□ -1.46
SPTBN1-201ENST00000333896 DCHS2Q6V1P9 2916 aa5.91□□□□□ -1.46
SPTBN1-201ENST00000333896 DNAH14Q0VDD8 3507 aa5.88□□□□□ -1.47
SPTBN1-201ENST00000333896 MKI67P46013 3256 aaKnown RBP5.87□□□□□ -1.47
SPTBN1-201ENST00000333896 P0C880 135 aa5.85□□□□□ -1.47
SPTBN1-201ENST00000333896 CELSR3Q9NYQ7 3312 aa5.85□□□□□ -1.47
SPTBN1-201ENST00000333896 UNC80Q8N2C7 3258 aa5.83□□□□□ -1.48
SPTBN1-201ENST00000333896 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
SPTBN1-201ENST00000333896 VWFP04275 2813 aa5.81□□□□□ -1.48
SPTBN1-201ENST00000333896 PKD1L1Q8TDX9 2849 aa5.81□□□□□ -1.48
SPTBN1-201ENST00000333896 TENM4Q6N022 2769 aa5.8□□□□□ -1.48
SPTBN1-201ENST00000333896 H0YAA0 97 aa5.8□□□□□ -1.48
SPTBN1-201ENST00000333896 KRTAP10-1P60331 282 aa5.79□□□□□ -1.48
SPTBN1-201ENST00000333896 BOD1L1Q8NFC6 3051 aa5.78□□□□□ -1.48
SPTBN1-201ENST00000333896 ZANQ9Y493 2812 aa5.77□□□□□ -1.49
SPTBN1-201ENST00000333896 KRTAP10-2P60368 255 aa5.76□□□□□ -1.49
SPTBN1-201ENST00000333896 KRTAP1-5Q9BYS1 174 aa5.75□□□□□ -1.49
SPTBN1-201ENST00000333896 TENM2Q9NT68 2774 aa5.74□□□□□ -1.49
SPTBN1-201ENST00000333896 KRTAP1-3Q8IUG1 177 aa5.71□□□□□ -1.5
SPTBN1-201ENST00000333896 MXRA5Q9NR99 2828 aa5.71□□□□□ -1.5
SPTBN1-201ENST00000333896 COL7A1Q02388 2944 aa5.7□□□□□ -1.5
SPTBN1-201ENST00000333896 HTTP42858 3142 aa5.7□□□□□ -1.5
SPTBN1-201ENST00000333896 KRTAP10-8P60410 259 aa5.7□□□□□ -1.5
SPTBN1-201ENST00000333896 ADGRG4Q8IZF6 3080 aa5.7□□□□□ -1.5
SPTBN1-201ENST00000333896 KRTAP13-1Q8IUC0 172 aa5.69□□□□□ -1.5
SPTBN1-201ENST00000333896 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
SPTBN1-201ENST00000333896 COL6A3P12111 3177 aa5.69□□□□□ -1.5
SPTBN1-201ENST00000333896 CELSR1Q9NYQ6 3014 aa5.68□□□□□ -1.5
SPTBN1-201ENST00000333896 ATMQ13315 3056 aa5.68□□□□□ -1.5
SPTBN1-201ENST00000333896 INE1O15225 51 aa5.66□□□□□ -1.5
SPTBN1-201ENST00000333896 KRTAP1-1Q07627 177 aa5.66□□□□□ -1.5
SPTBN1-201ENST00000333896 FBN2P35556 2912 aa5.66□□□□□ -1.5
SPTBN1-201ENST00000333896 HRNRQ86YZ3 2850 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-201ENST00000333896 Q6ZRN7 208 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-201ENST00000333896 VCANP13611 3396 aa5.6□□□□□ -1.51
SPTBN1-201ENST00000333896 LAMA3Q16787 3333 aa5.59□□□□□ -1.51
SPTBN1-201ENST00000333896 CFAP47Q6ZTR5 3102 aa5.56□□□□□ -1.52
SPTBN1-201ENST00000333896 KRTAP7-1Q8IUC3 87 aa5.54□□□□□ -1.52
SPTBN1-201ENST00000333896 BRCA2P51587 3418 aa5.53□□□□□ -1.52
SPTBN1-201ENST00000333896 A0A1B0GVY2 172 aa5.49□□□□□ -1.53
SPTBN1-201ENST00000333896 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
SPTBN1-201ENST00000333896 WDFY3Q8IZQ1 3526 aa5.47□□□□□ -1.53
SPTBN1-201ENST00000333896 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
SPTBN1-201ENST00000333896 CDH23Q9H251 3354 aa5.46□□□□□ -1.54
SPTBN1-201ENST00000333896 KRTAP21-3Q3LHN1 58 aa5.45□□□□□ -1.54
SPTBN1-201ENST00000333896 SPEGQ15772 3267 aa5.42□□□□□ -1.54
SPTBN1-201ENST00000333896 KRTAP13-3Q3SY46 172 aa5.41□□□□□ -1.54
SPTBN1-201ENST00000333896 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
SPTBN1-201ENST00000333896 NBPF19A0A087WUL8 3843 aa5.36□□□□□ -1.55
SPTBN1-201ENST00000333896 DMDP11532 3685 aa5.35□□□□□ -1.55
SPTBN1-201ENST00000333896 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
SPTBN1-201ENST00000333896 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
SPTBN1-201ENST00000333896 ZFHX4Q86UP3 3567 aa5.32□□□□□ -1.56
SPTBN1-201ENST00000333896 SPTBN5Q9NRC6 3674 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-201ENST00000333896 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
SPTBN1-201ENST00000333896 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
SPTBN1-201ENST00000333896 ASPMQ8IZT6 3477 aa5.3□□□□□ -1.56
SPTBN1-201ENST00000333896 SZT2Q5T011 3432 aa5.3□□□□□ -1.56
SPTBN1-201ENST00000333896 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
SPTBN1-201ENST00000333896 LAMA5O15230 3695 aa5.28□□□□□ -1.56
SPTBN1-201ENST00000333896 XP32Q5T750 250 aa5.27□□□□□ -1.57
SPTBN1-201ENST00000333896 SMG1Q96Q15 3661 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-201ENST00000333896 AKAP9Q99996 3911 aa5.23□□□□□ -1.57
SPTBN1-201ENST00000333896 SPENQ96T58 3664 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-201ENST00000333896 OTOGQ6ZRI0 2925 aa5.22□□□□□ -1.57
SPTBN1-201ENST00000333896 EYSQ5T1H1 3165 aa5.2□□□□□ -1.58
SPTBN1-201ENST00000333896 ALMS1Q8TCU4 4167 aa5.2□□□□□ -1.58
SPTBN1-201ENST00000333896 MYO15AQ9UKN7 3530 aa5.19□□□□□ -1.58
SPTBN1-201ENST00000333896 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
SPTBN1-201ENST00000333896 FBN1P35555 2871 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-201ENST00000333896 CSMD1Q96PZ7 3565 aa5.17□□□□□ -1.58
SPTBN1-201ENST00000333896 LOC400499M0QZD8 3231 aa5.17□□□□□ -1.58
SPTBN1-201ENST00000333896 DCHS1Q96JQ0 3298 aa5.16□□□□□ -1.58
SPTBN1-201ENST00000333896 KRTAP1-4P0C5Y4 121 aa5.13□□□□□ -1.59
SPTBN1-201ENST00000333896 RELNP78509 3460 aa5.11□□□□□ -1.59
SPTBN1-201ENST00000333896 FBN3Q75N90 2809 aa5.07□□□□□ -1.6
SPTBN1-201ENST00000333896 VPS13CQ709C8 3753 aa5.07□□□□□ -1.6
SPTBN1-201ENST00000333896 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-201ENST00000333896 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
SPTBN1-201ENST00000333896 SVEP1Q4LDE5 3571 aa4.87□□□□□ -1.63
SPTBN1-201ENST00000333896 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
SPTBN1-201ENST00000333896 TRRAPQ9Y4A5 3859 aa4.84□□□□□ -1.63
SPTBN1-201ENST00000333896 CUBNO60494 3623 aa4.79□□□□□ -1.64
SPTBN1-201ENST00000333896 MUC3AQ02505 3323 aa4.79□□□□□ -1.64
SPTBN1-201ENST00000333896 CMYA5Q8N3K9 4069 aa4.71□□□□□ -1.66
SPTBN1-201ENST00000333896 CSMD3Q7Z407 3707 aa4.69□□□□□ -1.66
SPTBN1-201ENST00000333896 KRTAP3-2Q9BYR7 98 aa4.69□□□□□ -1.66
SPTBN1-201ENST00000333896 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
SPTBN1-201ENST00000333896 CSMD2Q7Z408 3487 aa4.68□□□□□ -1.66
SPTBN1-201ENST00000333896 BSNQ9UPA5 3926 aa4.66□□□□□ -1.66
SPTBN1-201ENST00000333896 DNAH3Q8TD57 4116 aa4.63□□□□□ -1.67
SPTBN1-201ENST00000333896 MT3P25713 68 aa4.63□□□□□ -1.67
SPTBN1-201ENST00000333896 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
SPTBN1-201ENST00000333896 KRTAP3-3Q9BYR6 98 aa4.61□□□□□ -1.67
SPTBN1-201ENST00000333896 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms