RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 RTL8CO15255 209 aa8.25□□□□□ -1.09
MKS1-201ENST00000313863 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
MKS1-201ENST00000313863 HRES1P13985 223 aa8.23□□□□□ -1.09
MKS1-201ENST00000313863 PLECQ15149 4684 aaKnown RBP8.22□□□□□ -1.09
MKS1-201ENST00000313863 SPTSSBQ8NFR3 76 aa8.22□□□□□ -1.09
MKS1-201ENST00000313863 DNAH7Q8WXX0 4024 aa8.21□□□□□ -1.1
MKS1-201ENST00000313863 C8orf87E5RJ46 101 aa8.2□□□□□ -1.1
MKS1-201ENST00000313863 CSMD3Q7Z407 3707 aa8.19□□□□□ -1.1
MKS1-201ENST00000313863 A0A087X002 238 aa8.18□□□□□ -1.1
MKS1-201ENST00000313863 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
MKS1-201ENST00000313863 RBM12B-AS1Q9P1G2 102 aa8.18□□□□□ -1.1
MKS1-201ENST00000313863 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
MKS1-201ENST00000313863 VPS13DQ5THJ4 4388 aa8.18□□□□□ -1.1
MKS1-201ENST00000313863 ACYP2P14621 99 aa8.17□□□□□ -1.1
MKS1-201ENST00000313863 SPINK6Q6UWN8 80 aa8.17□□□□□ -1.1
MKS1-201ENST00000313863 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
MKS1-201ENST00000313863 IGLV7-43P04211 117 aa8.15□□□□□ -1.1
MKS1-201ENST00000313863 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.1
MKS1-201ENST00000313863 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
MKS1-201ENST00000313863 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
MKS1-201ENST00000313863 Q5W150 140 aa8.12□□□□□ -1.11
MKS1-201ENST00000313863 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
MKS1-201ENST00000313863 DNAH17Q9UFH2 4485 aa8.1□□□□□ -1.11
MKS1-201ENST00000313863 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
MKS1-201ENST00000313863 DNAH8Q96JB1 4490 aa8.09□□□□□ -1.11
MKS1-201ENST00000313863 SPINK7P58062 85 aa8.08□□□□□ -1.12
MKS1-201ENST00000313863 LINC00313P59037 77 aa8.07□□□□□ -1.12
MKS1-201ENST00000313863 DMAC1Q96GE9 116 aa8.07□□□□□ -1.12
MKS1-201ENST00000313863 C1orf134Q5TEV5 83 aa8.07□□□□□ -1.12
MKS1-201ENST00000313863 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
MKS1-201ENST00000313863 PRKDCP78527 4128 aaKnown RBP8.03□□□□□ -1.12
MKS1-201ENST00000313863 STARD9Q9P2P6 4700 aa8.03□□□□□ -1.12
MKS1-201ENST00000313863 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
MKS1-201ENST00000313863 IGKV2-30P06310 120 aa8.01□□□□□ -1.13
MKS1-201ENST00000313863 DNAH2Q9P225 4427 aa7.98□□□□□ -1.13
MKS1-201ENST00000313863 A0A1B0GU69 56 aa7.97□□□□□ -1.13
MKS1-201ENST00000313863 FRAS1Q86XX4 4008 aa7.97□□□□□ -1.13
MKS1-201ENST00000313863 MEGF8Q7Z7M0 2845 aa7.95□□□□□ -1.14
MKS1-201ENST00000313863 FBN3Q75N90 2809 aa7.93□□□□□ -1.14
MKS1-201ENST00000313863 KMT2AQ03164 3969 aa7.92□□□□□ -1.14
MKS1-201ENST00000313863 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
MKS1-201ENST00000313863 KRTAP13-2Q52LG2 175 aa7.91□□□□□ -1.14
MKS1-201ENST00000313863 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
MKS1-201ENST00000313863 LY6G6CO95867 125 aa7.89□□□□□ -1.15
MKS1-201ENST00000313863 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
MKS1-201ENST00000313863 TGP01266 2768 aa7.88□□□□□ -1.15
MKS1-201ENST00000313863 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
MKS1-201ENST00000313863 DNAH6Q9C0G6 4158 aa7.87□□□□□ -1.15
MKS1-201ENST00000313863 UQCR11O14957 56 aa7.87□□□□□ -1.15
MKS1-201ENST00000313863 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
MKS1-201ENST00000313863 IGKV2D-30A0A075B6S6 120 aa7.85□□□□□ -1.15
MKS1-201ENST00000313863 Q6ZSA8 131 aa7.85□□□□□ -1.15
MKS1-201ENST00000313863 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
MKS1-201ENST00000313863 KRTAP10-2P60368 255 aa7.84□□□□□ -1.15
MKS1-201ENST00000313863 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
MKS1-201ENST00000313863 KRTAP21-3Q3LHN1 58 aa7.83□□□□□ -1.16
MKS1-201ENST00000313863 DNAH5Q8TE73 4624 aa7.82□□□□□ -1.16
MKS1-201ENST00000313863 SPINK1P00995 79 aa7.8□□□□□ -1.16
MKS1-201ENST00000313863 KRTAP1-4P0C5Y4 121 aa7.8□□□□□ -1.16
MKS1-201ENST00000313863 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
MKS1-201ENST00000313863 TYMSOSQ8TAI1 123 aa7.77□□□□□ -1.17
MKS1-201ENST00000313863 PRAC1Q96KF2 57 aa7.75□□□□□ -1.17
MKS1-201ENST00000313863 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
MKS1-201ENST00000313863 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
MKS1-201ENST00000313863 ADM2Q7Z4H4 148 aa7.71□□□□□ -1.18
MKS1-201ENST00000313863 LRP1BQ9NZR2 4599 aa7.69□□□□□ -1.18
MKS1-201ENST00000313863 PKD1P98161 4303 aa7.67□□□□□ -1.18
MKS1-201ENST00000313863 LINC00304Q8N9R0 145 aa7.67□□□□□ -1.18
MKS1-201ENST00000313863 Q8N1X5 172 aa7.63□□□□□ -1.19
MKS1-201ENST00000313863 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
MKS1-201ENST00000313863 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
MKS1-201ENST00000313863 A8MUU9 505 aa7.56□□□□□ -1.2
MKS1-201ENST00000313863 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
MKS1-201ENST00000313863 CSAG1Q6PB30 78 aa7.52□□□□□ -1.21
MKS1-201ENST00000313863 SACSQ9NZJ4 4579 aa7.52□□□□□ -1.21
MKS1-201ENST00000313863 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
MKS1-201ENST00000313863 A0A1B0GU33 70 aa7.49□□□□□ -1.21
MKS1-201ENST00000313863 C9orf92A6NGG3 77 aa7.47□□□□□ -1.21
MKS1-201ENST00000313863 H0YAA0 97 aa7.47□□□□□ -1.21
MKS1-201ENST00000313863 HYDINQ4G0P3 5121 aa7.47□□□□□ -1.21
MKS1-201ENST00000313863 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
MKS1-201ENST00000313863 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
MKS1-201ENST00000313863 H3BS24 57 aa7.42□□□□□ -1.22
MKS1-201ENST00000313863 K7ERS5 55 aa7.4□□□□□ -1.23
MKS1-201ENST00000313863 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
MKS1-201ENST00000313863 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
MKS1-201ENST00000313863 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
MKS1-201ENST00000313863 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
MKS1-201ENST00000313863 PKHD1P08F94 4074 aa7.34□□□□□ -1.23
MKS1-201ENST00000313863 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
MKS1-201ENST00000313863 KRTAP10-4P60372 401 aaPredicted RBP7.32□□□□□ -1.24
MKS1-201ENST00000313863 DYNC1H1Q14204 4646 aaKnown RBP7.32□□□□□ -1.24
MKS1-201ENST00000313863 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
MKS1-201ENST00000313863 ROMO1P60602 79 aa7.25□□□□□ -1.25
MKS1-201ENST00000313863 FAT1Q14517 4588 aa7.22□□□□□ -1.25
MKS1-201ENST00000313863 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
MKS1-201ENST00000313863 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
MKS1-201ENST00000313863 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
MKS1-201ENST00000313863 S4R3F8 94 aa7.12□□□□□ -1.27
MKS1-201ENST00000313863 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms