RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 DCHS2Q6V1P9 2916 aa10.84□□□□□ -0.67
BPTF-201ENST00000306378 GOLGB1Q14789 3259 aaKnown RBP10.84□□□□□ -0.67
BPTF-201ENST00000306378 Q5VSD8 79 aa10.82□□□□□ -0.68
BPTF-201ENST00000306378 DMXL2Q8TDJ6 3036 aa10.76□□□□□ -0.69
BPTF-201ENST00000306378 Q6ZRN7 208 aaPredicted RBP10.72□□□□□ -0.69
BPTF-201ENST00000306378 KRTAP13-1Q8IUC0 172 aa10.71□□□□□ -0.69
BPTF-201ENST00000306378 H0YAA0 97 aa10.69□□□□□ -0.7
BPTF-201ENST00000306378 WDFY4Q6ZS81 3184 aa10.69□□□□□ -0.7
BPTF-201ENST00000306378 KRTAP10-1P60331 282 aa10.65□□□□□ -0.71
BPTF-201ENST00000306378 FBN2P35556 2912 aa10.64□□□□□ -0.71
BPTF-201ENST00000306378 MXRA5Q9NR99 2828 aa10.6□□□□□ -0.71
BPTF-201ENST00000306378 VWFP04275 2813 aa10.56□□□□□ -0.72
BPTF-201ENST00000306378 FREM2Q5SZK8 3169 aa10.52□□□□□ -0.72
BPTF-201ENST00000306378 KRTAP10-2P60368 255 aa10.52□□□□□ -0.73
BPTF-201ENST00000306378 HRNRQ86YZ3 2850 aaPredicted RBP10.51□□□□□ -0.73
BPTF-201ENST00000306378 TENM4Q6N022 2769 aa10.49□□□□□ -0.73
BPTF-201ENST00000306378 LAMA1P25391 3075 aa10.45□□□□□ -0.74
BPTF-201ENST00000306378 KRTAP13-2Q52LG2 175 aa10.44□□□□□ -0.74
BPTF-201ENST00000306378 PKD1L1Q8TDX9 2849 aa10.43□□□□□ -0.74
BPTF-201ENST00000306378 TENM2Q9NT68 2774 aa10.4□□□□□ -0.74
BPTF-201ENST00000306378 XIRP2A4UGR9 3374 aa10.39□□□□□ -0.75
BPTF-201ENST00000306378 DMXL1Q9Y485 3027 aa10.36□□□□□ -0.75
BPTF-201ENST00000306378 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
BPTF-201ENST00000306378 CELSR1Q9NYQ6 3014 aa10.33□□□□□ -0.76
BPTF-201ENST00000306378 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
BPTF-201ENST00000306378 ATMQ13315 3056 aa10.28□□□□□ -0.76
BPTF-201ENST00000306378 PRO2289Q9P1D8 64 aa10.26□□□□□ -0.77
BPTF-201ENST00000306378 BOD1L1Q8NFC6 3051 aa10.26□□□□□ -0.77
BPTF-201ENST00000306378 COL7A1Q02388 2944 aa10.24□□□□□ -0.77
BPTF-201ENST00000306378 ZFHX3Q15911 3703 aa10.17□□□□□ -0.78
BPTF-201ENST00000306378 HTTP42858 3142 aa10.17□□□□□ -0.78
BPTF-201ENST00000306378 USP34Q70CQ2 3546 aa10.15□□□□□ -0.79
BPTF-201ENST00000306378 ADGRG4Q8IZF6 3080 aa10.14□□□□□ -0.79
BPTF-201ENST00000306378 INE1O15225 51 aa10.14□□□□□ -0.79
BPTF-201ENST00000306378 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
BPTF-201ENST00000306378 REV3LO60673 3130 aa10.03□□□□□ -0.8
BPTF-201ENST00000306378 COL6A3P12111 3177 aa10.02□□□□□ -0.81
BPTF-201ENST00000306378 KRTAP13-4Q3LI77 160 aa10□□□□□ -0.81
BPTF-201ENST00000306378 XP32Q5T750 250 aa9.99□□□□□ -0.81
BPTF-201ENST00000306378 UNC80Q8N2C7 3258 aa9.98□□□□□ -0.81
BPTF-201ENST00000306378 TPRXLQ17RH7 258 aa9.97□□□□□ -0.81
BPTF-201ENST00000306378 MEGF8Q7Z7M0 2845 aa9.96□□□□□ -0.81
BPTF-201ENST00000306378 MKI67P46013 3256 aaKnown RBP9.96□□□□□ -0.82
BPTF-201ENST00000306378 KRTAP13-3Q3SY46 172 aa9.9□□□□□ -0.82
BPTF-201ENST00000306378 CELSR3Q9NYQ7 3312 aa9.83□□□□□ -0.84
BPTF-201ENST00000306378 KRTAP1-4P0C5Y4 121 aa9.82□□□□□ -0.84
BPTF-201ENST00000306378 KRTAP12-2P59991 146 aa9.76□□□□□ -0.85
BPTF-201ENST00000306378 LAMA3Q16787 3333 aa9.7□□□□□ -0.86
BPTF-201ENST00000306378 FBN3Q75N90 2809 aa9.68□□□□□ -0.86
BPTF-201ENST00000306378 DNAH14Q0VDD8 3507 aa9.65□□□□□ -0.87
BPTF-201ENST00000306378 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
BPTF-201ENST00000306378 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
BPTF-201ENST00000306378 KRTAP15-1Q3LI76 137 aa9.58□□□□□ -0.88
BPTF-201ENST00000306378 FBN1P35555 2871 aaKnown RBP9.58□□□□□ -0.88
BPTF-201ENST00000306378 SPTBN5Q9NRC6 3674 aaKnown RBP9.53□□□□□ -0.88
BPTF-201ENST00000306378 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
BPTF-201ENST00000306378 VCANP13611 3396 aa9.5□□□□□ -0.89
BPTF-201ENST00000306378 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
BPTF-201ENST00000306378 BRCA2P51587 3418 aa9.46□□□□□ -0.9
BPTF-201ENST00000306378 SPEGQ15772 3267 aa9.36□□□□□ -0.91
BPTF-201ENST00000306378 MYO15AQ9UKN7 3530 aa9.29□□□□□ -0.92
BPTF-201ENST00000306378 KRTAP23-1A1A580 65 aa9.29□□□□□ -0.92
BPTF-201ENST00000306378 NBPF19A0A087WUL8 3843 aa9.28□□□□□ -0.92
BPTF-201ENST00000306378 KRTAP21-3Q3LHN1 58 aa9.26□□□□□ -0.93
BPTF-201ENST00000306378 A0A1B0GVY2 172 aa9.24□□□□□ -0.93
BPTF-201ENST00000306378 CDH23Q9H251 3354 aa9.2□□□□□ -0.94
BPTF-201ENST00000306378 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
BPTF-201ENST00000306378 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
BPTF-201ENST00000306378 ZFHX4Q86UP3 3567 aa9.08□□□□□ -0.96
BPTF-201ENST00000306378 EYSQ5T1H1 3165 aa9.07□□□□□ -0.96
BPTF-201ENST00000306378 WDFY3Q8IZQ1 3526 aa9□□□□□ -0.97
BPTF-201ENST00000306378 SMG1Q96Q15 3661 aaKnown RBP8.99□□□□□ -0.97
BPTF-201ENST00000306378 KRTAP3-1Q9BYR8 98 aa8.99□□□□□ -0.97
BPTF-201ENST00000306378 AKAP9Q99996 3911 aa8.99□□□□□ -0.97
BPTF-201ENST00000306378 DMDP11532 3685 aa8.89□□□□□ -0.99
BPTF-201ENST00000306378 SZT2Q5T011 3432 aa8.86□□□□□ -0.99
BPTF-201ENST00000306378 LOC400499M0QZD8 3231 aa8.85□□□□□ -0.99
BPTF-201ENST00000306378 KRTAP10-12P60413 245 aa8.81□□□□□ -1
BPTF-201ENST00000306378 LAMA5O15230 3695 aa8.75□□□□□ -1.01
BPTF-201ENST00000306378 VPS13CQ709C8 3753 aa8.74□□□□□ -1.01
BPTF-201ENST00000306378 ALMS1Q8TCU4 4167 aa8.74□□□□□ -1.01
BPTF-201ENST00000306378 RELNP78509 3460 aa8.73□□□□□ -1.01
BPTF-201ENST00000306378 TRRAPQ9Y4A5 3859 aa8.71□□□□□ -1.02
BPTF-201ENST00000306378 ASPMQ8IZT6 3477 aa8.68□□□□□ -1.02
BPTF-201ENST00000306378 DCHS1Q96JQ0 3298 aa8.65□□□□□ -1.02
BPTF-201ENST00000306378 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
BPTF-201ENST00000306378 KRTAP12-3P60328 96 aa8.59□□□□□ -1.03
BPTF-201ENST00000306378 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
BPTF-201ENST00000306378 BSNQ9UPA5 3926 aa8.49□□□□□ -1.05
BPTF-201ENST00000306378 CSMD1Q96PZ7 3565 aa8.41□□□□□ -1.06
BPTF-201ENST00000306378 DNAH3Q8TD57 4116 aa8.21□□□□□ -1.09
BPTF-201ENST00000306378 CSMD3Q7Z407 3707 aa8.14□□□□□ -1.11
BPTF-201ENST00000306378 LCE3AQ5TA76 89 aa8.14□□□□□ -1.11
BPTF-201ENST00000306378 LYSTQ99698 3801 aa8.13□□□□□ -1.11
BPTF-201ENST00000306378 MUC3AQ02505 3323 aa8.11□□□□□ -1.11
BPTF-201ENST00000306378 KRTAP19-4Q3LI73 84 aa8.09□□□□□ -1.11
BPTF-201ENST00000306378 CMYA5Q8N3K9 4069 aa8.06□□□□□ -1.12
BPTF-201ENST00000306378 SVEP1Q4LDE5 3571 aa8.03□□□□□ -1.12
BPTF-201ENST00000306378 KRTAP10-5P60370 271 aa8□□□□□ -1.13
BPTF-201ENST00000306378 CUBNO60494 3623 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms