RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
DNMT3A-201ENST00000264709 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
DNMT3A-201ENST00000264709 Q6ZSA8 131 aa7.08□□□□□ -1.28
DNMT3A-201ENST00000264709 EYSQ5T1H1 3165 aa7.07□□□□□ -1.28
DNMT3A-201ENST00000264709 PLAC8Q9NZF1 115 aa7.07□□□□□ -1.28
DNMT3A-201ENST00000264709 CELSR1Q9NYQ6 3014 aa7.06□□□□□ -1.28
DNMT3A-201ENST00000264709 PKD1L1Q8TDX9 2849 aa7.05□□□□□ -1.28
DNMT3A-201ENST00000264709 MYO15AQ9UKN7 3530 aa7.05□□□□□ -1.28
DNMT3A-201ENST00000264709 KRTAP16-1A8MUX0 517 aa7.03□□□□□ -1.28
DNMT3A-201ENST00000264709 LOC400499M0QZD8 3231 aa7.03□□□□□ -1.28
DNMT3A-201ENST00000264709 SRRM2Q9UQ35 2752 aaKnown RBP7.01□□□□□ -1.29
DNMT3A-201ENST00000264709 M0R2T5 61 aa6.98□□□□□ -1.29
DNMT3A-201ENST00000264709 S4R3F8 94 aa6.98□□□□□ -1.29
DNMT3A-201ENST00000264709 ANAPC11Q9NYG5 84 aa6.97□□□□□ -1.29
DNMT3A-201ENST00000264709 FBN1P35555 2871 aaKnown RBP6.97□□□□□ -1.29
DNMT3A-201ENST00000264709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.29
DNMT3A-201ENST00000264709 ROMO1P60602 79 aa6.96□□□□□ -1.3
DNMT3A-201ENST00000264709 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
DNMT3A-201ENST00000264709 R4GN34 69 aa6.92□□□□□ -1.3
DNMT3A-201ENST00000264709 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
DNMT3A-201ENST00000264709 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
DNMT3A-201ENST00000264709 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.3
DNMT3A-201ENST00000264709 WDFY3Q8IZQ1 3526 aa6.89□□□□□ -1.31
DNMT3A-201ENST00000264709 KRTAP1-5Q9BYS1 174 aa6.87□□□□□ -1.31
DNMT3A-201ENST00000264709 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
DNMT3A-201ENST00000264709 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
DNMT3A-201ENST00000264709 KRTAP13-1Q8IUC0 172 aa6.86□□□□□ -1.31
DNMT3A-201ENST00000264709 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
DNMT3A-201ENST00000264709 SPEGQ15772 3267 aa6.85□□□□□ -1.31
DNMT3A-201ENST00000264709 A8MU10 97 aa6.8□□□□□ -1.32
DNMT3A-201ENST00000264709 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
DNMT3A-201ENST00000264709 PANO1I0J062 215 aa6.76□□□□□ -1.33
DNMT3A-201ENST00000264709 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
DNMT3A-201ENST00000264709 NOTCH2NLQ7Z3S9 236 aa6.75□□□□□ -1.33
DNMT3A-201ENST00000264709 M0QZ58 72 aa6.73□□□□□ -1.33
DNMT3A-201ENST00000264709 COL7A1Q02388 2944 aa6.69□□□□□ -1.34
DNMT3A-201ENST00000264709 LAMA5O15230 3695 aa6.68□□□□□ -1.34
DNMT3A-201ENST00000264709 SPENQ96T58 3664 aaKnown RBP6.67□□□□□ -1.34
DNMT3A-201ENST00000264709 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
DNMT3A-201ENST00000264709 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
DNMT3A-201ENST00000264709 C20orf166-AS1Q96NR2 134 aa6.66□□□□□ -1.34
DNMT3A-201ENST00000264709 ZFHX3Q15911 3703 aa6.65□□□□□ -1.34
DNMT3A-201ENST00000264709 A8MUU9 505 aa6.65□□□□□ -1.35
DNMT3A-201ENST00000264709 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
DNMT3A-201ENST00000264709 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
DNMT3A-201ENST00000264709 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
DNMT3A-201ENST00000264709 DCHS1Q96JQ0 3298 aa6.62□□□□□ -1.35
DNMT3A-201ENST00000264709 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
DNMT3A-201ENST00000264709 Q5VSD8 79 aa6.59□□□□□ -1.35
DNMT3A-201ENST00000264709 SMG1Q96Q15 3661 aaKnown RBP6.58□□□□□ -1.36
DNMT3A-201ENST00000264709 DMDP11532 3685 aa6.56□□□□□ -1.36
DNMT3A-201ENST00000264709 ASPMQ8IZT6 3477 aa6.55□□□□□ -1.36
DNMT3A-201ENST00000264709 ZFHX4Q86UP3 3567 aa6.54□□□□□ -1.36
DNMT3A-201ENST00000264709 RELNP78509 3460 aa6.54□□□□□ -1.36
DNMT3A-201ENST00000264709 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
DNMT3A-201ENST00000264709 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
DNMT3A-201ENST00000264709 H0YAA0 97 aa6.46□□□□□ -1.37
DNMT3A-201ENST00000264709 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
DNMT3A-201ENST00000264709 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
DNMT3A-201ENST00000264709 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
DNMT3A-201ENST00000264709 KRTAP10-2P60368 255 aa6.4□□□□□ -1.39
DNMT3A-201ENST00000264709 CSMD1Q96PZ7 3565 aa6.39□□□□□ -1.39
DNMT3A-201ENST00000264709 SVEP1Q4LDE5 3571 aa6.33□□□□□ -1.4
DNMT3A-201ENST00000264709 TNP1P09430 55 aa6.32□□□□□ -1.4
DNMT3A-201ENST00000264709 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
DNMT3A-201ENST00000264709 TRRAPQ9Y4A5 3859 aa6.3□□□□□ -1.4
DNMT3A-201ENST00000264709 P0C880 135 aa6.27□□□□□ -1.41
DNMT3A-201ENST00000264709 AKAP9Q99996 3911 aa6.26□□□□□ -1.41
DNMT3A-201ENST00000264709 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
DNMT3A-201ENST00000264709 NBPF19A0A087WUL8 3843 aa6.22□□□□□ -1.41
DNMT3A-201ENST00000264709 MUC3AQ02505 3323 aa6.21□□□□□ -1.42
DNMT3A-201ENST00000264709 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
DNMT3A-201ENST00000264709 CUBNO60494 3623 aa6.18□□□□□ -1.42
DNMT3A-201ENST00000264709 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
DNMT3A-201ENST00000264709 BSNQ9UPA5 3926 aa6.07□□□□□ -1.44
DNMT3A-201ENST00000264709 XP32Q5T750 250 aa6.01□□□□□ -1.45
DNMT3A-201ENST00000264709 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
DNMT3A-201ENST00000264709 KRTAP10-8P60410 259 aa5.97□□□□□ -1.45
DNMT3A-201ENST00000264709 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
DNMT3A-201ENST00000264709 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
DNMT3A-201ENST00000264709 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
DNMT3A-201ENST00000264709 CSMD2Q7Z408 3487 aa5.84□□□□□ -1.47
DNMT3A-201ENST00000264709 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
DNMT3A-201ENST00000264709 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
DNMT3A-201ENST00000264709 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
DNMT3A-201ENST00000264709 CSMD3Q7Z407 3707 aa5.71□□□□□ -1.5
DNMT3A-201ENST00000264709 ALMS1Q8TCU4 4167 aa5.71□□□□□ -1.5
DNMT3A-201ENST00000264709 ZNF469Q96JG9 3925 aaPredicted RBP5.71□□□□□ -1.5
DNMT3A-201ENST00000264709 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
DNMT3A-201ENST00000264709 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
DNMT3A-201ENST00000264709 INE1O15225 51 aa5.61□□□□□ -1.51
DNMT3A-201ENST00000264709 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
DNMT3A-201ENST00000264709 A0A1B0GVY2 172 aa5.6□□□□□ -1.51
DNMT3A-201ENST00000264709 HECTD4Q9Y4D8 3996 aa5.55□□□□□ -1.52
DNMT3A-201ENST00000264709 KRTAP3-3Q9BYR6 98 aa5.55□□□□□ -1.52
DNMT3A-201ENST00000264709 LYSTQ99698 3801 aa5.51□□□□□ -1.53
DNMT3A-201ENST00000264709 CMYA5Q8N3K9 4069 aa5.36□□□□□ -1.55
DNMT3A-201ENST00000264709 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
DNMT3A-201ENST00000264709 ANK3Q12955 4377 aaKnown RBP5.35□□□□□ -1.55
DNMT3A-201ENST00000264709 ANK2Q01484 3957 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms