RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 VPS13DQ5THJ4 4388 aa7.98□□□□□ -1.13
H3F3B-201ENST00000254810 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
H3F3B-201ENST00000254810 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
H3F3B-201ENST00000254810 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.13
H3F3B-201ENST00000254810 SPINK7P58062 85 aa7.96□□□□□ -1.14
H3F3B-201ENST00000254810 KMT2AQ03164 3969 aa7.96□□□□□ -1.14
H3F3B-201ENST00000254810 Q5W150 140 aa7.95□□□□□ -1.14
H3F3B-201ENST00000254810 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
H3F3B-201ENST00000254810 A6NN06 94 aa7.94□□□□□ -1.14
H3F3B-201ENST00000254810 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
H3F3B-201ENST00000254810 CDC42SE1Q9NRR8 79 aa7.94□□□□□ -1.14
H3F3B-201ENST00000254810 KTN1-AS1Q86SY8 53 aa7.93□□□□□ -1.14
H3F3B-201ENST00000254810 MDFIQ99750 246 aa7.93□□□□□ -1.14
H3F3B-201ENST00000254810 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
H3F3B-201ENST00000254810 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
H3F3B-201ENST00000254810 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
H3F3B-201ENST00000254810 SPINK6Q6UWN8 80 aa7.91□□□□□ -1.14
H3F3B-201ENST00000254810 KRTAP13-3Q3SY46 172 aa7.9□□□□□ -1.14
H3F3B-201ENST00000254810 FBN3Q75N90 2809 aa7.9□□□□□ -1.14
H3F3B-201ENST00000254810 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.15
H3F3B-201ENST00000254810 PRKDCP78527 4128 aaKnown RBP7.89□□□□□ -1.15
H3F3B-201ENST00000254810 A0A087WTM6 91 aa7.87□□□□□ -1.15
H3F3B-201ENST00000254810 ZNF706Q9Y5V0 76 aaPredicted RBP7.86□□□□□ -1.15
H3F3B-201ENST00000254810 ZNF861PO60384 105 aa7.86□□□□□ -1.15
H3F3B-201ENST00000254810 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
H3F3B-201ENST00000254810 DNAH6Q9C0G6 4158 aa7.84□□□□□ -1.15
H3F3B-201ENST00000254810 RTL8CO15255 209 aa7.84□□□□□ -1.15
H3F3B-201ENST00000254810 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.16
H3F3B-201ENST00000254810 CIRBP-AS1Q8TBR5 109 aa7.81□□□□□ -1.16
H3F3B-201ENST00000254810 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
H3F3B-201ENST00000254810 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
H3F3B-201ENST00000254810 DNAH5Q8TE73 4624 aa7.79□□□□□ -1.16
H3F3B-201ENST00000254810 TGP01266 2768 aa7.78□□□□□ -1.16
H3F3B-201ENST00000254810 NUPR2A6NF83 97 aa7.77□□□□□ -1.17
H3F3B-201ENST00000254810 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
H3F3B-201ENST00000254810 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
H3F3B-201ENST00000254810 ACYP2P14621 99 aa7.73□□□□□ -1.17
H3F3B-201ENST00000254810 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
H3F3B-201ENST00000254810 LRP1BQ9NZR2 4599 aa7.71□□□□□ -1.18
H3F3B-201ENST00000254810 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
H3F3B-201ENST00000254810 C8orf87E5RJ46 101 aa7.67□□□□□ -1.18
H3F3B-201ENST00000254810 LINC00313P59037 77 aa7.67□□□□□ -1.18
H3F3B-201ENST00000254810 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
H3F3B-201ENST00000254810 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
H3F3B-201ENST00000254810 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.18
H3F3B-201ENST00000254810 SSBP3-AS1Q7Z2R9 100 aa7.64□□□□□ -1.19
H3F3B-201ENST00000254810 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
H3F3B-201ENST00000254810 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
H3F3B-201ENST00000254810 A0A1B0GU69 56 aa7.63□□□□□ -1.19
H3F3B-201ENST00000254810 KRTAP10-2P60368 255 aa7.59□□□□□ -1.19
H3F3B-201ENST00000254810 PKD1P98161 4303 aa7.59□□□□□ -1.19
H3F3B-201ENST00000254810 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
H3F3B-201ENST00000254810 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
H3F3B-201ENST00000254810 C1orf134Q5TEV5 83 aa7.58□□□□□ -1.2
H3F3B-201ENST00000254810 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
H3F3B-201ENST00000254810 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
H3F3B-201ENST00000254810 FAT2Q9NYQ8 4349 aa7.54□□□□□ -1.2
H3F3B-201ENST00000254810 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
H3F3B-201ENST00000254810 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
H3F3B-201ENST00000254810 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
H3F3B-201ENST00000254810 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
H3F3B-201ENST00000254810 LY6G6CO95867 125 aa7.5□□□□□ -1.21
H3F3B-201ENST00000254810 UQCR11O14957 56 aa7.49□□□□□ -1.21
H3F3B-201ENST00000254810 KRTAP10-1P60331 282 aa7.48□□□□□ -1.21
H3F3B-201ENST00000254810 SPINK1P00995 79 aa7.46□□□□□ -1.21
H3F3B-201ENST00000254810 Q8N1X5 172 aa7.46□□□□□ -1.22
H3F3B-201ENST00000254810 Q6ZSA8 131 aa7.43□□□□□ -1.22
H3F3B-201ENST00000254810 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
H3F3B-201ENST00000254810 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
H3F3B-201ENST00000254810 PKHD1P08F94 4074 aa7.37□□□□□ -1.23
H3F3B-201ENST00000254810 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
H3F3B-201ENST00000254810 SACSQ9NZJ4 4579 aa7.33□□□□□ -1.24
H3F3B-201ENST00000254810 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
H3F3B-201ENST00000254810 H0YAA0 97 aa7.31□□□□□ -1.24
H3F3B-201ENST00000254810 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
H3F3B-201ENST00000254810 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
H3F3B-201ENST00000254810 FAT1Q14517 4588 aa7.25□□□□□ -1.25
H3F3B-201ENST00000254810 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
H3F3B-201ENST00000254810 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
H3F3B-201ENST00000254810 A8MUU9 505 aa7.23□□□□□ -1.25
H3F3B-201ENST00000254810 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
H3F3B-201ENST00000254810 APOBP04114 4563 aaKnown RBP7.19□□□□□ -1.26
H3F3B-201ENST00000254810 KRTAP21-3Q3LHN1 58 aa7.18□□□□□ -1.26
H3F3B-201ENST00000254810 A0A1B0GU33 70 aa7.17□□□□□ -1.26
H3F3B-201ENST00000254810 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
H3F3B-201ENST00000254810 SMR3BP02814 79 aaPredicted RBP7.15□□□□□ -1.26
H3F3B-201ENST00000254810 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
H3F3B-201ENST00000254810 RPS29P62273 56 aaKnown RBP7.14□□□□□ -1.27
H3F3B-201ENST00000254810 FLG2Q5D862 2391 aaPredicted RBP7.13□□□□□ -1.27
H3F3B-201ENST00000254810 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
H3F3B-201ENST00000254810 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
H3F3B-201ENST00000254810 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
H3F3B-201ENST00000254810 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
H3F3B-201ENST00000254810 H3BS24 57 aa7.03□□□□□ -1.28
H3F3B-201ENST00000254810 FAT3Q8TDW7 4589 aa7.03□□□□□ -1.28
H3F3B-201ENST00000254810 HSPG2P98160 4391 aa7.01□□□□□ -1.29
H3F3B-201ENST00000254810 LRP1Q07954 4544 aaKnown RBP6.99□□□□□ -1.29
H3F3B-201ENST00000254810 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.29
H3F3B-201ENST00000254810 TNXBP22105 4242 aa6.95□□□□□ -1.3
H3F3B-201ENST00000254810 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms