RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TGP01266 2768 aa4.58□□□□□ -1.68
APOB-201ENST00000233242 ZZEF1O43149 2961 aa4.56□□□□□ -1.68
APOB-201ENST00000233242 KRTAP13-2Q52LG2 175 aa4.55□□□□□ -1.68
APOB-201ENST00000233242 PDZD2O15018 2839 aa4.54□□□□□ -1.68
APOB-201ENST00000233242 TNP1P09430 55 aa4.53□□□□□ -1.68
APOB-201ENST00000233242 FREM2Q5SZK8 3169 aa4.51□□□□□ -1.69
APOB-201ENST00000233242 RANBP2P49792 3224 aaKnown RBP4.5□□□□□ -1.69
APOB-201ENST00000233242 P0C880 135 aa4.5□□□□□ -1.69
APOB-201ENST00000233242 H0YAA0 97 aa4.49□□□□□ -1.69
APOB-201ENST00000233242 COL12A1Q99715 3063 aa4.48□□□□□ -1.69
APOB-201ENST00000233242 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
APOB-201ENST00000233242 CRYBG3Q68DQ2 2970 aa4.47□□□□□ -1.69
APOB-201ENST00000233242 ATMQ13315 3056 aa4.45□□□□□ -1.7
APOB-201ENST00000233242 FBN2P35556 2912 aa4.44□□□□□ -1.7
APOB-201ENST00000233242 HTTP42858 3142 aa4.43□□□□□ -1.7
APOB-201ENST00000233242 ADGRG4Q8IZF6 3080 aa4.42□□□□□ -1.7
APOB-201ENST00000233242 TNRC18O15417 2968 aaPredicted RBP4.41□□□□□ -1.7
APOB-201ENST00000233242 LAMA1P25391 3075 aa4.4□□□□□ -1.7
APOB-201ENST00000233242 REV3LO60673 3130 aa4.36□□□□□ -1.71
APOB-201ENST00000233242 MXRA5Q9NR99 2828 aa4.35□□□□□ -1.71
APOB-201ENST00000233242 HRNRQ86YZ3 2850 aaPredicted RBP4.34□□□□□ -1.71
APOB-201ENST00000233242 BOD1L1Q8NFC6 3051 aa4.34□□□□□ -1.71
APOB-201ENST00000233242 UTRNP46939 3433 aa4.34□□□□□ -1.72
APOB-201ENST00000233242 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
APOB-201ENST00000233242 PKD1L1Q8TDX9 2849 aa4.32□□□□□ -1.72
APOB-201ENST00000233242 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
APOB-201ENST00000233242 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
APOB-201ENST00000233242 MKI67P46013 3256 aaKnown RBP4.28□□□□□ -1.72
APOB-201ENST00000233242 XP32Q5T750 250 aa4.28□□□□□ -1.72
APOB-201ENST00000233242 VWFP04275 2813 aa4.27□□□□□ -1.73
APOB-201ENST00000233242 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
APOB-201ENST00000233242 DMXL1Q9Y485 3027 aa4.25□□□□□ -1.73
APOB-201ENST00000233242 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
APOB-201ENST00000233242 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
APOB-201ENST00000233242 CELSR1Q9NYQ6 3014 aa4.21□□□□□ -1.74
APOB-201ENST00000233242 LAMA3Q16787 3333 aa4.21□□□□□ -1.74
APOB-201ENST00000233242 CFAP47Q6ZTR5 3102 aa4.16□□□□□ -1.74
APOB-201ENST00000233242 UNC80Q8N2C7 3258 aa4.16□□□□□ -1.74
APOB-201ENST00000233242 XIRP2A4UGR9 3374 aa4.16□□□□□ -1.74
APOB-201ENST00000233242 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
APOB-201ENST00000233242 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
APOB-201ENST00000233242 COL6A3P12111 3177 aa4.13□□□□□ -1.75
APOB-201ENST00000233242 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
APOB-201ENST00000233242 CELSR3Q9NYQ7 3312 aa4.11□□□□□ -1.75
APOB-201ENST00000233242 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
APOB-201ENST00000233242 KRTAP21-3Q3LHN1 58 aa4.09□□□□□ -1.76
APOB-201ENST00000233242 COL7A1Q02388 2944 aa4.07□□□□□ -1.76
APOB-201ENST00000233242 MEGF8Q7Z7M0 2845 aa4.07□□□□□ -1.76
APOB-201ENST00000233242 FBN3Q75N90 2809 aa4.06□□□□□ -1.76
APOB-201ENST00000233242 FBN1P35555 2871 aaKnown RBP4.05□□□□□ -1.76
APOB-201ENST00000233242 BRCA2P51587 3418 aa4.03□□□□□ -1.76
APOB-201ENST00000233242 INE1O15225 51 aa4.03□□□□□ -1.76
APOB-201ENST00000233242 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
APOB-201ENST00000233242 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
APOB-201ENST00000233242 KRTAP3-1Q9BYR8 98 aa3.98□□□□□ -1.77
APOB-201ENST00000233242 A0A1B0GVY2 172 aa3.98□□□□□ -1.77
APOB-201ENST00000233242 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
APOB-201ENST00000233242 EYSQ5T1H1 3165 aa3.95□□□□□ -1.78
APOB-201ENST00000233242 VCANP13611 3396 aa3.91□□□□□ -1.78
APOB-201ENST00000233242 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
APOB-201ENST00000233242 USP34Q70CQ2 3546 aa3.84□□□□□ -1.79
APOB-201ENST00000233242 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
APOB-201ENST00000233242 MYO15AQ9UKN7 3530 aa3.81□□□□□ -1.8
APOB-201ENST00000233242 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
APOB-201ENST00000233242 DNAH14Q0VDD8 3507 aa3.8□□□□□ -1.8
APOB-201ENST00000233242 CDH23Q9H251 3354 aa3.79□□□□□ -1.8
APOB-201ENST00000233242 SPEGQ15772 3267 aa3.79□□□□□ -1.8
APOB-201ENST00000233242 LOC400499M0QZD8 3231 aa3.74□□□□□ -1.81
APOB-201ENST00000233242 SZT2Q5T011 3432 aa3.74□□□□□ -1.81
APOB-201ENST00000233242 KRTAP3-3Q9BYR6 98 aa3.73□□□□□ -1.81
APOB-201ENST00000233242 DCHS1Q96JQ0 3298 aa3.7□□□□□ -1.82
APOB-201ENST00000233242 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
APOB-201ENST00000233242 ZFHX3Q15911 3703 aa3.63□□□□□ -1.83
APOB-201ENST00000233242 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
APOB-201ENST00000233242 SPTBN5Q9NRC6 3674 aaKnown RBP3.59□□□□□ -1.83
APOB-201ENST00000233242 ZFHX4Q86UP3 3567 aa3.58□□□□□ -1.84
APOB-201ENST00000233242 AKAP9Q99996 3911 aa3.57□□□□□ -1.84
APOB-201ENST00000233242 WDFY3Q8IZQ1 3526 aa3.57□□□□□ -1.84
APOB-201ENST00000233242 TRRAPQ9Y4A5 3859 aa3.55□□□□□ -1.84
APOB-201ENST00000233242 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
APOB-201ENST00000233242 NBPF19A0A087WUL8 3843 aa3.51□□□□□ -1.85
APOB-201ENST00000233242 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
APOB-201ENST00000233242 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
APOB-201ENST00000233242 RELNP78509 3460 aa3.43□□□□□ -1.86
APOB-201ENST00000233242 ALMS1Q8TCU4 4167 aa3.4□□□□□ -1.86
APOB-201ENST00000233242 DMDP11532 3685 aa3.39□□□□□ -1.87
APOB-201ENST00000233242 SMG1Q96Q15 3661 aaKnown RBP3.37□□□□□ -1.87
APOB-201ENST00000233242 CSMD1Q96PZ7 3565 aa3.36□□□□□ -1.87
APOB-201ENST00000233242 SPENQ96T58 3664 aaKnown RBP3.35□□□□□ -1.87
APOB-201ENST00000233242 LAMA5O15230 3695 aa3.35□□□□□ -1.87
APOB-201ENST00000233242 LORP23490 312 aaPredicted RBP3.35□□□□□ -1.87
APOB-201ENST00000233242 VPS13CQ709C8 3753 aa3.34□□□□□ -1.87
APOB-201ENST00000233242 DNAH1Q9P2D7 4330 aa3.34□□□□□ -1.87
APOB-201ENST00000233242 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
APOB-201ENST00000233242 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
APOB-201ENST00000233242 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
APOB-201ENST00000233242 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
APOB-201ENST00000233242 MUC3AQ02505 3323 aa3.29□□□□□ -1.88
APOB-201ENST00000233242 ANK3Q12955 4377 aaKnown RBP3.28□□□□□ -1.88
APOB-201ENST00000233242 CUBNO60494 3623 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms