RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 TRAV21A0A0B4J279 112 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 TULP4Q9NRJ4 1543 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 TENM4Q6N022 2769 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 MKI67P46013 3256 aaKnown RBP0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 CSMD1Q96PZ7 3565 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 NBEAL2Q6ZNJ1 2754 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 ANKHD1Q8IWZ3 2542 aaKnown RBP0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 REV3LO60673 3130 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 CFAP47Q6ZTR5 3102 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 PDE4DIPQ5VU43 2346 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 SPTY2D1-AS1A0A0U1RR47 76 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 LCE6AA0A183 80 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 I3L2K1 104 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 COX7BP24311 80 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 NCBP2-AS2Q69YL0 99 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 DOT1LQ8TEK3 1739 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 DUOX1Q9NRD9 1551 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 IQGAP1P46940 1657 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 HTTP42858 3142 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 RANBP2P49792 3224 aaKnown RBP0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 MUC3AQ02505 3323 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 BRCA2P51587 3418 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 NCOR1O75376 2440 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 NCOR2Q9Y618 2525 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 SLIT1O75093 1534 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 HERC1Q15751 4861 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 NBEAQ8NFP9 2946 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 FRYLO94915 3013 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 NDUFA4O00483 81 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 IFI6P09912 130 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 FCER1GP30273 86 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 USMG5Q96IX5 58 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 CFAP54Q96N23 3096 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 C5orf42Q9H799 3197 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 SAMD9LQ8IVG5 1584 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 ZNF292O60281 2723 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 GCC2Q8IWJ2 1684 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 TNRC6CQ9HCJ0 1690 aaKnown RBP0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 GCN1Q92616 2671 aaKnown RBP0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 C4AP0C0L4 1744 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 C4BP0C0L5 1744 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 DDX60Q8IY21 1712 aaKnown RBP0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 TOGARAM1Q9Y4F4 1720 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 TRIOO75962 3097 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 CCDC168Q8NDH2 2452 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 ENHOQ6UWT2 76 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 ABRACLQ9P1F3 81 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 DOPEY2Q9Y3R5 2298 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 SPEGQ15772 3267 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 MYO9AB2RTY4 2548 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 LMO7Q8WWI1 1683 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 FRYQ5TBA9 3013 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 C2CD3Q4AC94 2353 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 CPSF4LA6NMK7 179 aaKnown RBP0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 CCL22O00626 93 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 COX6B2Q6YFQ2 88 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 KCNQ1DNQ9H478 68 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 VPS13AQ96RL7 3174 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 DEPDC5O75140 1603 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 DEFB131BA0A096LNP1 70 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 ETDCA0A1B0GVM5 59 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 H0YGX0 51 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 I3L3M4 83 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 SPTBN2O15020 2390 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 IGSF10Q6WRI0 2623 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 DMXL1Q9Y485 3027 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 ZZEF1O43149 2961 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 KALRNO60229 2985 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 USP34Q70CQ2 3546 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 CEP290O15078 2479 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 SMIM27A0A1W2PRY6 76 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 TMEM167BQ9NRX6 74 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 CRIPTQ9P021 101 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 LAMA3Q16787 3333 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 SSPOA2VEC9 5147 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 DNAH12Q6ZR08 3092 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 MROH2BQ7Z745 1585 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 XIRP2A4UGR9 3374 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 PDZD2O15018 2839 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 BSNQ9UPA5 3926 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 FAT4Q6V0I7 4981 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 M0R1W7 72 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 DCHS1Q96JQ0 3298 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 CLTCL1P53675 1640 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 CFAP46Q8IYW2 2715 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 URB1O60287 2271 aaKnown RBP0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 RELNP78509 3460 aa0.84□□□□□ -2.27
AP001960.1-201ENST00000506494 CDH23Q9H251 3354 aa0.84□□□□□ -2.28
AP001960.1-201ENST00000506494 LRRK2Q5S007 2527 aa0.84□□□□□ -2.28
AP001960.1-201ENST00000506494 COL12A1Q99715 3063 aa0.84□□□□□ -2.28
AP001960.1-201ENST00000506494 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 LOC400499M0QZD8 3231 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 LINC00959A0A1B0GUT2 108 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 LINC01546A6NGU7 62 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms