RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 TRAV21A0A0B4J279 112 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 TULP4Q9NRJ4 1543 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 TENM4Q6N022 2769 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 MKI67P46013 3256 aaKnown RBP0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 CSMD1Q96PZ7 3565 aa0.92□□□□□ -2.26
AP001960.1-201ENST00000506494 NBEAL2Q6ZNJ1 2754 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 ANKHD1Q8IWZ3 2542 aaKnown RBP0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 REV3LO60673 3130 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 CFAP47Q6ZTR5 3102 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 PDE4DIPQ5VU43 2346 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 SPTY2D1-AS1A0A0U1RR47 76 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 LCE6AA0A183 80 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 I3L2K1 104 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 COX7BP24311 80 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 NCBP2-AS2Q69YL0 99 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 DOT1LQ8TEK3 1739 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 DUOX1Q9NRD9 1551 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 IQGAP1P46940 1657 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 HTTP42858 3142 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 RANBP2P49792 3224 aaKnown RBP0.91□□□□□ -2.26
AP001960.1-201ENST00000506494 MUC3AQ02505 3323 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 BRCA2P51587 3418 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 NCOR1O75376 2440 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 NCOR2Q9Y618 2525 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 SLIT1O75093 1534 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 HERC1Q15751 4861 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 NBEAQ8NFP9 2946 aa0.9□□□□□ -2.26
AP001960.1-201ENST00000506494 FRYLO94915 3013 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 NDUFA4O00483 81 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 IFI6P09912 130 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 FCER1GP30273 86 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 USMG5Q96IX5 58 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 CFAP54Q96N23 3096 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 C5orf42Q9H799 3197 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 SAMD9LQ8IVG5 1584 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 ZNF292O60281 2723 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 GCC2Q8IWJ2 1684 aa0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 TNRC6CQ9HCJ0 1690 aaKnown RBP0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 GCN1Q92616 2671 aaKnown RBP0.9□□□□□ -2.27
AP001960.1-201ENST00000506494 C4AP0C0L4 1744 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 C4BP0C0L5 1744 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 DDX60Q8IY21 1712 aaKnown RBP0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 TOGARAM1Q9Y4F4 1720 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 TRIOO75962 3097 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 CCDC168Q8NDH2 2452 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 ENHOQ6UWT2 76 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 ABRACLQ9P1F3 81 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 DOPEY2Q9Y3R5 2298 aa0.89□□□□□ -2.27
AP001960.1-201ENST00000506494 SPEGQ15772 3267 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 MYO9AB2RTY4 2548 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 LMO7Q8WWI1 1683 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 FRYQ5TBA9 3013 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 C2CD3Q4AC94 2353 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 CPSF4LA6NMK7 179 aaKnown RBP0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 CCL22O00626 93 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 COX6B2Q6YFQ2 88 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 KCNQ1DNQ9H478 68 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 VPS13AQ96RL7 3174 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 DEPDC5O75140 1603 aa0.88□□□□□ -2.27
AP001960.1-201ENST00000506494 DEFB131BA0A096LNP1 70 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 ETDCA0A1B0GVM5 59 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 H0YGX0 51 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 I3L3M4 83 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 SPTBN2O15020 2390 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 IGSF10Q6WRI0 2623 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 DMXL1Q9Y485 3027 aa0.87□□□□□ -2.27
AP001960.1-201ENST00000506494 ZZEF1O43149 2961 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 KALRNO60229 2985 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 USP34Q70CQ2 3546 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 CEP290O15078 2479 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 SMIM27A0A1W2PRY6 76 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 TMEM167BQ9NRX6 74 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 CRIPTQ9P021 101 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 LAMA3Q16787 3333 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 SSPOA2VEC9 5147 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 DNAH12Q6ZR08 3092 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 MROH2BQ7Z745 1585 aa0.86□□□□□ -2.27
AP001960.1-201ENST00000506494 XIRP2A4UGR9 3374 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 PDZD2O15018 2839 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 BSNQ9UPA5 3926 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 FAT4Q6V0I7 4981 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 M0R1W7 72 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 DCHS1Q96JQ0 3298 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 CLTCL1P53675 1640 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 CFAP46Q8IYW2 2715 aa0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 URB1O60287 2271 aaKnown RBP0.85□□□□□ -2.27
AP001960.1-201ENST00000506494 RELNP78509 3460 aa0.84□□□□□ -2.27
AP001960.1-201ENST00000506494 CDH23Q9H251 3354 aa0.84□□□□□ -2.28
AP001960.1-201ENST00000506494 LRRK2Q5S007 2527 aa0.84□□□□□ -2.28
AP001960.1-201ENST00000506494 COL12A1Q99715 3063 aa0.84□□□□□ -2.28
AP001960.1-201ENST00000506494 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 LOC400499M0QZD8 3231 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 LINC00959A0A1B0GUT2 108 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 LINC01546A6NGU7 62 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms