RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 DMXL1Q9Y485 3027 aa-0.52□□□□□ -2.49
RAB5A-207ENST00000473608 MGAM2Q2M2H8 2515 aa-0.52□□□□□ -2.49
RAB5A-207ENST00000473608 LTN1O94822 1766 aa-0.52□□□□□ -2.49
RAB5A-207ENST00000473608 MAP3K4Q9Y6R4 1608 aa-0.53□□□□□ -2.49
RAB5A-207ENST00000473608 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.53□□□□□ -2.49
RAB5A-207ENST00000473608 WDR87Q6ZQQ6 2873 aa-0.53□□□□□ -2.49
RAB5A-207ENST00000473608 UACAQ9BZF9 1416 aa-0.53□□□□□ -2.49
RAB5A-207ENST00000473608 LRRK2Q5S007 2527 aa-0.53□□□□□ -2.49
RAB5A-207ENST00000473608 CCDC168Q8NDH2 2452 aa-0.53□□□□□ -2.49
RAB5A-207ENST00000473608 UBR4Q5T4S7 5183 aa-0.53□□□□□ -2.5
RAB5A-207ENST00000473608 NCOA2Q15596 1464 aa-0.54□□□□□ -2.5
RAB5A-207ENST00000473608 C4AP0C0L4 1744 aa-0.54□□□□□ -2.5
RAB5A-207ENST00000473608 C4BP0C0L5 1744 aa-0.54□□□□□ -2.5
RAB5A-207ENST00000473608 DOT1LQ8TEK3 1739 aa-0.54□□□□□ -2.5
RAB5A-207ENST00000473608 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.54□□□□□ -2.5
RAB5A-207ENST00000473608 FAT3Q8TDW7 4589 aa-0.54□□□□□ -2.5
RAB5A-207ENST00000473608 UTP20O75691 2785 aaKnown RBP-0.55□□□□□ -2.5
RAB5A-207ENST00000473608 KANTRA0A1W2PQU2 76 aa-0.55□□□□□ -2.5
RAB5A-207ENST00000473608 EPPK1P58107 5090 aaKnown RBP-0.55□□□□□ -2.5
RAB5A-207ENST00000473608 MTORP42345 2549 aa-0.55□□□□□ -2.5
RAB5A-207ENST00000473608 NDUFB1O75438 58 aa-0.56□□□□□ -2.5
RAB5A-207ENST00000473608 KIAA1109Q2LD37 5005 aa-0.56□□□□□ -2.5
RAB5A-207ENST00000473608 KALRNO60229 2985 aa-0.56□□□□□ -2.5
RAB5A-207ENST00000473608 DNAH3Q8TD57 4116 aa-0.56□□□□□ -2.5
RAB5A-207ENST00000473608 LAMA1P25391 3075 aa-0.56□□□□□ -2.5
RAB5A-207ENST00000473608 VPS13DQ5THJ4 4388 aa-0.57□□□□□ -2.5
RAB5A-207ENST00000473608 URB2Q14146 1524 aaKnown RBP-0.57□□□□□ -2.5
RAB5A-207ENST00000473608 RNF213Q63HN8 5207 aa-0.57□□□□□ -2.5
RAB5A-207ENST00000473608 GCN1Q92616 2671 aaKnown RBP-0.57□□□□□ -2.5
RAB5A-207ENST00000473608 STARD9Q9P2P6 4700 aa-0.57□□□□□ -2.5
RAB5A-207ENST00000473608 CEP295Q9C0D2 2601 aa-0.58□□□□□ -2.5
RAB5A-207ENST00000473608 MED14O60244 1454 aa-0.58□□□□□ -2.5
RAB5A-207ENST00000473608 NBEAQ8NFP9 2946 aa-0.58□□□□□ -2.5
RAB5A-207ENST00000473608 FAM186AA6NE01 2351 aa-0.58□□□□□ -2.5
RAB5A-207ENST00000473608 DEFA5Q01523 94 aa-0.58□□□□□ -2.5
RAB5A-207ENST00000473608 NWD1Q149M9 1564 aa-0.58□□□□□ -2.5
RAB5A-207ENST00000473608 ITPR1Q14643 2758 aa-0.59□□□□□ -2.5
RAB5A-207ENST00000473608 NESP48681 1621 aa-0.59□□□□□ -2.5
RAB5A-207ENST00000473608 C3orf79P0CE67 100 aa-0.59□□□□□ -2.5
RAB5A-207ENST00000473608 SPRR2FQ96RM1 72 aa-0.59□□□□□ -2.5
RAB5A-207ENST00000473608 CUBNO60494 3623 aa-0.59□□□□□ -2.5
RAB5A-207ENST00000473608 ANKRD50Q9ULJ7 1429 aa-0.6□□□□□ -2.51
RAB5A-207ENST00000473608 ST20Q9HBF5 79 aa-0.6□□□□□ -2.51
RAB5A-207ENST00000473608 RYR2Q92736 4967 aa-0.6□□□□□ -2.51
RAB5A-207ENST00000473608 WIZO95785 1651 aa-0.61□□□□□ -2.51
RAB5A-207ENST00000473608 IFI6P09912 130 aa-0.61□□□□□ -2.51
RAB5A-207ENST00000473608 PRO3102Q9H379 93 aa-0.61□□□□□ -2.51
RAB5A-207ENST00000473608 CFAP46Q8IYW2 2715 aa-0.61□□□□□ -2.51
RAB5A-207ENST00000473608 PLXNC1O60486 1568 aa-0.62□□□□□ -2.51
RAB5A-207ENST00000473608 RB1CC1Q8TDY2 1594 aa-0.62□□□□□ -2.51
RAB5A-207ENST00000473608 PKHD1L1Q86WI1 4243 aa-0.62□□□□□ -2.51
RAB5A-207ENST00000473608 MAGI3Q5TCQ9 1506 aa-0.62□□□□□ -2.51
RAB5A-207ENST00000473608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.62□□□□□ -2.51
RAB5A-207ENST00000473608 H3BNG1 76 aa-0.62□□□□□ -2.51
RAB5A-207ENST00000473608 ARFGEF2Q9Y6D5 1785 aa-0.62□□□□□ -2.51
RAB5A-207ENST00000473608 PIK3C2BO00750 1634 aa-0.63□□□□□ -2.51
RAB5A-207ENST00000473608 UMAD1C9J7I0 102 aa-0.63□□□□□ -2.51
RAB5A-207ENST00000473608 LINC00158P58513 81 aa-0.63□□□□□ -2.51
RAB5A-207ENST00000473608 VPS13BQ7Z7G8 4022 aa-0.63□□□□□ -2.51
RAB5A-207ENST00000473608 COL6A5A8TX70 2615 aa-0.63□□□□□ -2.51
RAB5A-207ENST00000473608 FRYQ5TBA9 3013 aa-0.63□□□□□ -2.51
RAB5A-207ENST00000473608 MYO9AB2RTY4 2548 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 DIP2BQ9P265 1576 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 CCDC88BA6NC98 1476 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 LCE6AA0A183 80 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 C9orf92A6NGG3 77 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 MT1AP04731 61 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 DEFB121Q5J5C9 76 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 NBEAL2Q6ZNJ1 2754 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 MUC17Q685J3 4493 aa-0.64□□□□□ -2.51
RAB5A-207ENST00000473608 SCN11AQ9UI33 1791 aa-0.65□□□□□ -2.51
RAB5A-207ENST00000473608 ANK3Q12955 4377 aaKnown RBP-0.65□□□□□ -2.51
RAB5A-207ENST00000473608 IFI27P40305 119 aaPredicted RBP-0.65□□□□□ -2.51
RAB5A-207ENST00000473608 ADIRFQ15847 76 aa-0.65□□□□□ -2.51
RAB5A-207ENST00000473608 S100A13Q99584 98 aa-0.65□□□□□ -2.51
RAB5A-207ENST00000473608 DEPDC5O75140 1603 aa-0.66□□□□□ -2.51
RAB5A-207ENST00000473608 APOBP04114 4563 aaKnown RBP-0.66□□□□□ -2.52
RAB5A-207ENST00000473608 DNAH11Q96DT5 4516 aa-0.66□□□□□ -2.52
RAB5A-207ENST00000473608 H0YAA0 97 aa-0.67□□□□□ -2.52
RAB5A-207ENST00000473608 ATP5EP2Q5VTU8 51 aa-0.67□□□□□ -2.52
RAB5A-207ENST00000473608 LAMA3Q16787 3333 aa-0.68□□□□□ -2.52
RAB5A-207ENST00000473608 H3BUT2 72 aa-0.68□□□□□ -2.52
RAB5A-207ENST00000473608 TLN2Q9Y4G6 2542 aa-0.69□□□□□ -2.52
RAB5A-207ENST00000473608 LYNX1G3V0Z9 82 aa-0.69□□□□□ -2.52
RAB5A-207ENST00000473608 ACACBO00763 2458 aa-0.69□□□□□ -2.52
RAB5A-207ENST00000473608 SPTAN1Q13813 2472 aaKnown RBP-0.69□□□□□ -2.52
RAB5A-207ENST00000473608 LRBAP50851 2863 aa-0.69□□□□□ -2.52
RAB5A-207ENST00000473608 A0A0C4DFX4 3053 aa-0.69□□□□□ -2.52
RAB5A-207ENST00000473608 DDX60LQ5H9U9 1706 aaKnown RBP-0.69□□□□□ -2.52
RAB5A-207ENST00000473608 BIRC6Q9NR09 4857 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 ABCA13Q86UQ4 5058 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 NDUFA4O00483 81 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 HMGA1P17096 107 aaKnown RBP-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 DEFB1P60022 68 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 NREPQ16612 68 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 ERVK-7P63135 1459 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 CCDC18Q5T9S5 1454 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 RELNP78509 3460 aa-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 TLN1Q9Y490 2541 aaKnown RBP-0.7□□□□□ -2.52
RAB5A-207ENST00000473608 BPTFQ12830 3046 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms