RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ATP5EP2Q5VTU8 51 aa0.3□□□□□ -2.36
HMGB1P17-201ENST00000403495 HEPN1Q6WQI6 88 aa0.3□□□□□ -2.36
HMGB1P17-201ENST00000403495 MKI67P46013 3256 aaKnown RBP0.3□□□□□ -2.36
HMGB1P17-201ENST00000403495 RGPD2P0DJD1 1756 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 RELNP78509 3460 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 ABCC1P33527 1531 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 QSER1Q2KHR3 1735 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 LAMA3Q16787 3333 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 DMXL2Q8TDJ6 3036 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 RRBP1Q9P2E9 1410 aaKnown RBP0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 USP34Q70CQ2 3546 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 NF1P21359 2839 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 MGAQ8IWI9 3026 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 A0A087WXM4 84 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 LOC730098B7Z3J9 87 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 APC2O95996 2303 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 MAGI3Q5TCQ9 1506 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 DNAH7Q8WXX0 4024 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 CFAP74Q9C0B2 1584 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 CACNA1CQ13936 2221 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 PIK3C2BO00750 1634 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 ASPMQ8IZT6 3477 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 VPS13CQ709C8 3753 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 DEFB121Q5J5C9 76 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 CDKN2A-AS1Q9UH64 79 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 CEP170BQ9Y4F5 1589 aaPredicted RBP0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 KIF20BQ96Q89 1820 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 CFAP54Q96N23 3096 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 ACACAQ13085 2346 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LAMA1P25391 3075 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 UMAD1C9J7I0 102 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 IFI6P09912 130 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LELP1Q5T871 98 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LRP2P98164 4655 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 COL14A1Q05707 1796 aaKnown RBP0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 HTTP42858 3142 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LOC400499M0QZD8 3231 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 BRCA2P51587 3418 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 CENPFP49454 3210 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 POLR1AO95602 1720 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 ZNF831Q5JPB2 1677 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 ANKARQ7Z5J8 1434 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 IFI27P40305 119 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 C18orf32Q8TCD1 76 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 DMXL1Q9Y485 3027 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 TACC2O95359 2948 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 HECTD4Q9Y4D8 3996 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 WNK2Q9Y3S1 2297 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 CUBNO60494 3623 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 SPTBN5Q9NRC6 3674 aaKnown RBP0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 PRM1P04553 51 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 SMIM13P0DJ93 91 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 COX6B2Q6YFQ2 88 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 MYO15AQ9UKN7 3530 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 BCORQ6W2J9 1755 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 HUWE1Q7Z6Z7 4374 aaKnown RBP0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 FRYQ5TBA9 3013 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 CSMD2Q7Z408 3487 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 NREPQ16612 68 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 WFDC13Q8IUB5 93 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 LRP1BQ9NZR2 4599 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 WDFY3Q8IZQ1 3526 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 CHD7Q9P2D1 2997 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 NWD1Q149M9 1564 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 VPS13AQ96RL7 3174 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 CCDC88BA6NC98 1476 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 DNAH14Q0VDD8 3507 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 TRIOO75962 3097 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 MYCBP2O75592 4640 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 PLCE1Q9P212 2302 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 ANKRD36A6QL64 1941 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 DOPEY2Q9Y3R5 2298 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 UBR3Q6ZT12 1888 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 STARD9Q9P2P6 4700 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 ATMQ13315 3056 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 LTN1O94822 1766 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 DNAJC13O75165 2243 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 ADGRG4Q8IZF6 3080 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 MUC3AQ02505 3323 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 NDUFA3O95167 84 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 MAP3K1Q13233 1512 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 RGPD8O14715 1765 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 RGPD5Q99666 1765 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 SVEP1Q4LDE5 3571 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 DYNC1H1Q14204 4646 aaKnown RBP0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 ALMS1Q8TCU4 4167 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PTPN23Q9H3S7 1636 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 FAT2Q9NYQ8 4349 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 ABCA8O94911 1581 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 SMG1Q96Q15 3661 aaKnown RBP0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 LYSTQ99698 3801 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 DOT1LQ8TEK3 1739 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PRUNE2Q8WUY3 3088 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 TNRC6CQ9HCJ0 1690 aaKnown RBP0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PRKDCP78527 4128 aaKnown RBP0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PKD1P98161 4303 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 LPAP08519 4548 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms