RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	YNL195C	P40168	261 aa		0.36	□□□□□ -2.35
snR45	snR45	BOR1	P53838	576 aa		0.36	□□□□□ -2.35
snR45	snR45	YVH1	Q02256	364 aa	Known RBP	0.36	□□□□□ -2.35
snR45	snR45	GSH2	Q08220	491 aa		0.36	□□□□□ -2.35
snR45	snR45	FAL1	Q12099	399 aa	Known RBP	0.36	□□□□□ -2.35
snR45	snR45	POM34	Q12445	299 aa		0.36	□□□□□ -2.35
snR45	snR45	TY1B-DR3	Q99231	1755 aa		0.36	□□□□□ -2.35
snR45	snR45	ARO1	P08566	1588 aa	Known RBP	0.36	□□□□□ -2.35
snR45	snR45	VPS15	P22219	1454 aa		0.35	□□□□□ -2.35
snR45	snR45	PAN1	P32521	1480 aa		0.35	□□□□□ -2.35
snR45	snR45	CHD1	P32657	1468 aa		0.35	□□□□□ -2.35
snR45	snR45	YPK9	Q12697	1472 aa		0.35	□□□□□ -2.35
snR45	snR45	YRF1-3	P0CX14	1859 aa		0.35	□□□□□ -2.35
snR45	snR45	YRF1-7	P0CX15	1859 aa		0.35	□□□□□ -2.35
snR45	snR45	YRF1-6	P53819	1859 aa		0.35	□□□□□ -2.35
snR45	snR45	ESP1	Q03018	1630 aa		0.35	□□□□□ -2.35
snR45	snR45	ULS1	Q08562	1619 aa		0.35	□□□□□ -2.35
snR45	snR45	GDB1	Q06625	1536 aa		0.35	□□□□□ -2.35
snR45	snR45	PRP9	P19736	530 aa	Known RBP	0.35	□□□□□ -2.35
snR45	snR45	PRO3	P32263	286 aa	Known RBP	0.35	□□□□□ -2.35
snR45	snR45	MRP8	P35719	219 aa		0.35	□□□□□ -2.35
snR45	snR45	MAL31	P38156	614 aa		0.35	□□□□□ -2.35
snR45	snR45	SSF1	P38789	453 aa	Predicted RBP	0.35	□□□□□ -2.35
snR45	snR45	FAA4	P47912	694 aa	Known RBP	0.35	□□□□□ -2.35
snR45	snR45	YPT11	P48559	417 aa		0.35	□□□□□ -2.35
snR45	snR45	SNU56	Q03782	492 aa	Known RBP	0.35	□□□□□ -2.35
snR45	snR45	SPO75	Q07798	868 aa		0.35	□□□□□ -2.35
snR45	snR45	GET3	Q12154	354 aa	Known RBP	0.35	□□□□□ -2.35
snR45	snR45	TRM732	Q03496	1420 aa		0.35	□□□□□ -2.35
snR45	snR45	TY1B-NL2	Q99337	1749 aa	Known RBP	0.35	□□□□□ -2.35
snR45	snR45	YIL177C	P40434	1758 aa		0.34	□□□□□ -2.35
snR45	snR45	YJL225C	P40889	1758 aa		0.34	□□□□□ -2.35
snR45	snR45	FKS3	Q04952	1785 aa		0.34	□□□□□ -2.35
snR45	snR45	FAS1	P07149	2051 aa	Known RBP	0.34	□□□□□ -2.35
snR45	snR45	HAP1	P0CE41	1502 aa		0.34	□□□□□ -2.35
snR45	snR45	NUP170	P38181	1502 aa		0.34	□□□□□ -2.35
snR45	snR45	MSD1	P15179	658 aa	Known RBP	0.34	□□□□□ -2.36
snR45	snR45	YJU2	P28320	278 aa	Predicted RBP	0.34	□□□□□ -2.36
snR45	snR45	YBR284W	P38150	797 aa		0.34	□□□□□ -2.36
snR45	snR45	PCL6	P40038	420 aa		0.34	□□□□□ -2.36
snR45	snR45	YJR061W	P40355	935 aa		0.34	□□□□□ -2.36
snR45	snR45	IML1	P47170	1584 aa		0.34	□□□□□ -2.36
snR45	snR45	YGR283C	P53336	341 aa	Predicted RBP	0.34	□□□□□ -2.36
snR45	snR45	WAR1	Q03631	944 aa		0.34	□□□□□ -2.36
snR45	snR45	RRP5	Q05022	1729 aa	Known RBP	0.34	□□□□□ -2.36
snR45	snR45	YDR338C	Q05497	695 aa		0.34	□□□□□ -2.36
snR45	snR45	YPL216W	Q08964	1102 aa		0.34	□□□□□ -2.36
snR45	snR45	YOR131C	Q12486	218 aa		0.34	□□□□□ -2.36
snR45	snR45	URB1	P34241	1764 aa	Known RBP	0.34	□□□□□ -2.36
snR45	snR45	POL1	P13382	1468 aa		0.34	□□□□□ -2.36
snR45	snR45	YOR1	P53049	1477 aa		0.34	□□□□□ -2.36
snR45	snR45	BCK1	Q01389	1478 aa		0.34	□□□□□ -2.36
snR45	snR45	SCC2	Q04002	1493 aa		0.34	□□□□□ -2.36
snR45	snR45	POM152	P39685	1337 aa		0.34	□□□□□ -2.36
snR45	snR45	YBT1	P32386	1661 aa		0.33	□□□□□ -2.36
snR45	snR45	NUP188	P52593	1655 aa	Known RBP	0.33	□□□□□ -2.36
snR45	snR45	XRN1	P22147	1528 aa	Known RBP	0.33	□□□□□ -2.36
snR45	snR45	TY3B-G	Q99315	1547 aa		0.33	□□□□□ -2.36
snR45	snR45	FKS1	P38631	1876 aa	Known RBP	0.33	□□□□□ -2.36
snR45	snR45	ECM29	P38737	1868 aa		0.33	□□□□□ -2.36
snR45	snR45	MDN1	Q12019	4910 aa	Known RBP	0.33	□□□□□ -2.36
snR45	snR45	RIM15	P43565	1770 aa		0.33	□□□□□ -2.36
snR45	snR45	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	0.33	□□□□□ -2.36	not detected
snR45	snR45	SMK1	P41808	388 aa		0.33	□□□□□ -2.36
snR45	snR45	GYP8	P43570	497 aa		0.33	□□□□□ -2.36
snR45	snR45	BUD17	P53727	317 aa		0.33	□□□□□ -2.36
snR45	snR45	MFM1	Q02783	413 aa		0.33	□□□□□ -2.36
snR45	snR45	YDR514C	Q04408	483 aa		0.33	□□□□□ -2.36
snR45	snR45	PPT2	Q12036	173 aa		0.33	□□□□□ -2.36
snR45	snR45	BI3	Q9ZZW7	517 aa		0.33	□□□□□ -2.36
snR45	snR45	BUD3	P25558	1636 aa		0.33	□□□□□ -2.36
snR45	snR45	UFD4	P33202	1483 aa		0.33	□□□□□ -2.36
snR45	snR45	NUP159	P40477	1460 aa		0.33	□□□□□ -2.36
snR45	snR45	MLP2	P40457	1679 aa		0.33	□□□□□ -2.36
snR45	snR45	NUP192	P47054	1683 aa		0.33	□□□□□ -2.36
snR45	snR45	MOT1	P32333	1867 aa		0.33	□□□□□ -2.36
snR45	snR45	APC1	P53886	1748 aa		0.33	□□□□□ -2.36
snR45	snR45	SPP41	P38904	1435 aa		0.32	□□□□□ -2.36
snR45	snR45	CAT8	P39113	1433 aa		0.32	□□□□□ -2.36
snR45	snR45	ILS1	P09436	1072 aa	Known RBP	0.32	□□□□□ -2.36
snR45	snR45	SEC15	P22224	910 aa		0.32	□□□□□ -2.36
snR45	snR45	RPS2	P25443	254 aa	Known RBP	0.32	□□□□□ -2.36
snR45	snR45	PRS1	P32895	427 aa	Known RBP	0.32	□□□□□ -2.36
snR45	snR45	PAM1	P37304	830 aa	Known RBP	0.32	□□□□□ -2.36
snR45	snR45	BRN1	P38170	754 aa		0.32	□□□□□ -2.36
snR45	snR45	TIF4631	P39935	952 aa	Known RBP	0.32	□□□□□ -2.36
snR45	snR45	BNA2	P47125	453 aa		0.32	□□□□□ -2.36
snR45	snR45	RPN7	Q06103	429 aa	Known RBP	0.32	□□□□□ -2.36
snR45	snR45	YLL056C	Q12177	298 aa		0.32	□□□□□ -2.36
snR45	snR45	MYO4	P32492	1471 aa		0.32	□□□□□ -2.36
snR45	snR45	VMR1	P38735	1592 aa		0.32	□□□□□ -2.36
snR45	snR45	TY4B-H	P0C2J7	1802 aa		0.31	□□□□□ -2.36
snR45	snR45	TY4B-J	P47024	1803 aa		0.31	□□□□□ -2.36
snR45	snR45	SKI3	P17883	1432 aa	Known RBP	0.31	□□□□□ -2.36
snR45	snR45	SSN2	P38931	1420 aa		0.31	□□□□□ -2.36
snR45	snR45	SNT2	P53127	1403 aa		0.31	□□□□□ -2.36
snR45	snR45	YSP2	Q06681	1438 aa		0.31	□□□□□ -2.36
snR45	snR45	TRM3	Q07527	1436 aa		0.31	□□□□□ -2.36
snR45	snR45	SMC4	Q12267	1418 aa		0.31	□□□□□ -2.36
snR45	snR45	MMS22	Q06164	1454 aa		0.31	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms