RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeastyeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COT1YOR316C TIF35Q04067 274 aaKnown RBP5.37□□□□□ -1.55
COT1YOR316C MED7Q08278 222 aa5.37□□□□□ -1.55
COT1YOR316C TAF10Q12030 206 aa5.37□□□□□ -1.55
COT1YOR316C CSF1Q12150 2958 aa5.37□□□□□ -1.55
COT1YOR316C HRT3Q12347 344 aa5.37□□□□□ -1.55
COT1YOR316C CTF3Q12748 733 aa5.37□□□□□ -1.55
COT1YOR316C TRA1P38811 3744 aa5.37□□□□□ -1.55
COT1YOR316C MSB1P21339 1137 aaKnown RBP5.36□□□□□ -1.55
COT1YOR316C KIN3P22209 435 aa5.36□□□□□ -1.55
COT1YOR316C BMH1P29311 267 aaKnown RBP5.36□□□□□ -1.55
COT1YOR316C SEC6P32844 805 aa5.36□□□□□ -1.55
COT1YOR316C SRX1P36077 127 aa5.36□□□□□ -1.55
COT1YOR316C GDH3P39708 457 aa5.36□□□□□ -1.55
COT1YOR316C SNF7P39929 240 aaKnown RBP5.36□□□□□ -1.55
COT1YOR316C YEN1P40028 759 aa5.36□□□□□ -1.55
COT1YOR316C NUP82P40368 713 aa5.36□□□□□ -1.55
COT1YOR316C DUG1P43616 481 aaKnown RBP5.36□□□□□ -1.55
COT1YOR316C UBA2P52488 636 aa5.36□□□□□ -1.55
COT1YOR316C YCG1Q06680 1035 aa5.36□□□□□ -1.55
COT1YOR316C PTC5Q12511 572 aa5.36□□□□□ -1.55
COT1YOR316C CYC7P00045 113 aa5.35□□□□□ -1.55
COT1YOR316C PRP9P19736 530 aaKnown RBP5.35□□□□□ -1.55
COT1YOR316C NNK1P36003 928 aa5.35□□□□□ -1.55
COT1YOR316C ADD66P36040 267 aa5.35□□□□□ -1.55
COT1YOR316C YKR051WP36142 418 aa5.35□□□□□ -1.55
COT1YOR316C BAT1P38891 393 aaKnown RBP5.35□□□□□ -1.55
COT1YOR316C ERP2P39704 215 aa5.35□□□□□ -1.55
COT1YOR316C CCT5P40413 562 aaKnown RBP5.35□□□□□ -1.55
COT1YOR316C RSM25P40496 264 aa5.35□□□□□ -1.55
COT1YOR316C IML2P47031 731 aa5.35□□□□□ -1.55
COT1YOR316C YGR153WP48238 217 aa5.35□□□□□ -1.55
COT1YOR316C NUP84P52891 726 aa5.35□□□□□ -1.55
COT1YOR316C YGL036WP53185 909 aaPredicted RBP5.35□□□□□ -1.55
COT1YOR316C NOP13P53883 403 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
COT1YOR316C PGA2P53903 129 aa5.35□□□□□ -1.55
COT1YOR316C SEG1Q04279 960 aa5.35□□□□□ -1.55
COT1YOR316C HEL2Q05580 639 aaKnown RBP5.35□□□□□ -1.55
COT1YOR316C HDA2Q06629 674 aa5.35□□□□□ -1.55
COT1YOR316C RTK1Q12100 620 aaPredicted RBP5.35□□□□□ -1.55
COT1YOR316C NDJ1Q12366 352 aa5.35□□□□□ -1.55
COT1YOR316C HIS4P00815 799 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C TPK1P06244 397 aa5.34□□□□□ -1.55
COT1YOR316C REV1P12689 985 aa5.34□□□□□ -1.55
COT1YOR316C RPA135P22138 1203 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C RPC53P25441 422 aa5.34□□□□□ -1.55
COT1YOR316C URA1P28272 314 aaPredicted RBP5.34□□□□□ -1.55
COT1YOR316C CCR4P31384 837 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C STE5P32917 917 aa5.34□□□□□ -1.55
COT1YOR316C PET112P33893 541 aa5.34□□□□□ -1.55
COT1YOR316C YKT6P36015 200 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C OMA1P36163 345 aa5.34□□□□□ -1.55
COT1YOR316C SIF2P38262 535 aa5.34□□□□□ -1.55
COT1YOR316C YBR238CP38330 731 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C SIP3P38717 1229 aa5.34□□□□□ -1.55
COT1YOR316C YHR054CP38780 354 aa5.34□□□□□ -1.55
COT1YOR316C NUP60P39705 539 aa5.34□□□□□ -1.55
COT1YOR316C YIL161WP40449 235 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C ULP2P40537 1034 aaPredicted RBP5.34□□□□□ -1.55
COT1YOR316C SCD6P45978 349 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
COT1YOR316C TOF2Q02208 771 aa5.34□□□□□ -1.55
COT1YOR316C SMA1Q02651 245 aa5.34□□□□□ -1.55
COT1YOR316C MRL1Q06815 381 aa5.34□□□□□ -1.55
COT1YOR316C SHS1Q07657 551 aa5.34□□□□□ -1.55
COT1YOR316C DDP1Q99321 188 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C UTP20P35194 2493 aaKnown RBP5.34□□□□□ -1.55
COT1YOR316C HIR1P32479 840 aa5.33□□□□□ -1.56
COT1YOR316C PET10P36139 283 aa5.33□□□□□ -1.56
COT1YOR316C UBP13P38187 747 aa5.33□□□□□ -1.56
COT1YOR316C HSE1P38753 452 aa5.33□□□□□ -1.56
COT1YOR316C SAH1P39954 449 aaKnown RBP5.33□□□□□ -1.56
COT1YOR316C YJR061WP40355 935 aa5.33□□□□□ -1.56
COT1YOR316C TDA7P53882 636 aaPredicted RBP5.33□□□□□ -1.56
COT1YOR316C VTC3Q02725 835 aa5.33□□□□□ -1.56
COT1YOR316C CLU1Q03690 1277 aaKnown RBP5.33□□□□□ -1.56
COT1YOR316C TPP1Q03796 238 aa5.33□□□□□ -1.56
COT1YOR316C RSA3Q05942 220 aaKnown RBP5.33□□□□□ -1.56
COT1YOR316C ADY4Q05955 493 aa5.33□□□□□ -1.56
COT1YOR316C GCR1P07261 785 aa5.32□□□□□ -1.56
COT1YOR316C YEL076C-AP0CX16 216 aa5.32□□□□□ -1.56
COT1YOR316C YLR464WP0CX17 216 aa5.32□□□□□ -1.56
COT1YOR316C RPL4AP10664 362 aaKnown RBP5.32□□□□□ -1.56
COT1YOR316C TAF13P11747 167 aa5.32□□□□□ -1.56
COT1YOR316C PFK1P16861 987 aaKnown RBP5.32□□□□□ -1.56
COT1YOR316C ISY1P21374 235 aaPredicted RBP5.32□□□□□ -1.56
COT1YOR316C LIP5P32875 414 aa5.32□□□□□ -1.56
COT1YOR316C SHE3P38272 425 aaKnown RBP5.32□□□□□ -1.56
COT1YOR316C ATG12P38316 186 aa5.32□□□□□ -1.56
COT1YOR316C ERC1P38767 581 aa5.32□□□□□ -1.56
COT1YOR316C YEL076CP39971 216 aa5.32□□□□□ -1.56
COT1YOR316C ERG10P41338 398 aaKnown RBP5.32□□□□□ -1.56
COT1YOR316C RPL4BP49626 362 aaKnown RBP5.32□□□□□ -1.56
COT1YOR316C EAF7P53911 425 aaKnown RBP5.32□□□□□ -1.56
COT1YOR316C CEG1Q01159 459 aaPredicted RBP5.32□□□□□ -1.56
COT1YOR316C WAR1Q03631 944 aa5.32□□□□□ -1.56
COT1YOR316C SNU56Q03782 492 aaKnown RBP5.32□□□□□ -1.56
COT1YOR316C RKM2Q03942 479 aa5.32□□□□□ -1.56
COT1YOR316C CUR1Q06469 252 aa5.32□□□□□ -1.56
COT1YOR316C NKP1Q12493 238 aa5.32□□□□□ -1.56
COT1YOR316C GCD1P09032 578 aaPredicted RBP5.31□□□□□ -1.56
COT1YOR316C PHO8P11491 566 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms