RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C CBP3P21560 335 aa2.53□□□□□ -2
SOK2YMR016C FEN2P25621 512 aaKnown RBP2.53□□□□□ -2
SOK2YMR016C PRP45P28004 379 aaPredicted RBP2.53□□□□□ -2
SOK2YMR016C BEM3P32873 1128 aa2.53□□□□□ -2
SOK2YMR016C TGL1P34163 548 aa2.53□□□□□ -2
SOK2YMR016C GEX2P36173 615 aa2.53□□□□□ -2
SOK2YMR016C POL31P46957 487 aa2.53□□□□□ -2
SOK2YMR016C BNA3P47039 444 aaKnown RBP2.53□□□□□ -2
SOK2YMR016C CTK1Q03957 528 aaKnown RBP2.53□□□□□ -2
SOK2YMR016C SSP2Q08646 371 aa2.53□□□□□ -2
SOK2YMR016C VAS1P07806 1104 aaKnown RBP2.52□□□□□ -2.01
SOK2YMR016C MSM1P22438 575 aa2.52□□□□□ -2.01
SOK2YMR016C IFA38P38286 347 aa2.52□□□□□ -2.01
SOK2YMR016C PXA1P41909 870 aa2.52□□□□□ -2.01
SOK2YMR016C PAN2P53010 1115 aaPredicted RBP2.52□□□□□ -2.01
SOK2YMR016C HIM1Q06674 414 aa2.52□□□□□ -2.01
SOK2YMR016C TRM8Q12009 286 aa2.52□□□□□ -2.01
SOK2YMR016C ICL2Q12031 575 aa2.52□□□□□ -2.01
SOK2YMR016C NUP170P38181 1502 aa2.52□□□□□ -2.01
SOK2YMR016C YHR033WP38690 423 aa2.52□□□□□ -2.01
SOK2YMR016C STB5P38699 743 aa2.52□□□□□ -2.01
SOK2YMR016C MUP3P38734 546 aa2.52□□□□□ -2.01
SOK2YMR016C KHA1P40309 873 aa2.52□□□□□ -2.01
SOK2YMR016C NET1P47035 1189 aa2.52□□□□□ -2.01
SOK2YMR016C YCG1Q06680 1035 aa2.52□□□□□ -2.01
SOK2YMR016C OSW1Q08692 278 aa2.52□□□□□ -2.01
SOK2YMR016C VPS5Q92331 675 aa2.52□□□□□ -2.01
SOK2YMR016C THR1P17423 357 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C RPA135P22138 1203 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C MCM3P24279 971 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C CWH43P25618 953 aa2.51□□□□□ -2.01
SOK2YMR016C MVD1P32377 396 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C COS111P38308 924 aa2.51□□□□□ -2.01
SOK2YMR016C SFB3P38810 929 aa2.51□□□□□ -2.01
SOK2YMR016C YIL077CP40508 320 aa2.51□□□□□ -2.01
SOK2YMR016C COS12P53053 380 aa2.51□□□□□ -2.01
SOK2YMR016C RPS15Q01855 142 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C PSF3Q12146 194 aa2.51□□□□□ -2.01
SOK2YMR016C PCD1Q12524 340 aa2.51□□□□□ -2.01
SOK2YMR016C YOL087CQ99247 1116 aa2.51□□□□□ -2.01
SOK2YMR016C Q0010Q9ZZX9 128 aa2.51□□□□□ -2.01
SOK2YMR016C YRF1-1P0CX20 1796 aa2.51□□□□□ -2.01
SOK2YMR016C YRF1-5P0CX21 1796 aa2.51□□□□□ -2.01
SOK2YMR016C YRF1-8P0CX22 1796 aa2.51□□□□□ -2.01
SOK2YMR016C SNF1P06782 633 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C ADE3P07245 946 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C MTF2P10849 440 aa2.51□□□□□ -2.01
SOK2YMR016C DGR2P32330 852 aa2.51□□□□□ -2.01
SOK2YMR016C PHO11P35842 467 aa2.51□□□□□ -2.01
SOK2YMR016C YKR075CP36155 307 aa2.51□□□□□ -2.01
SOK2YMR016C APT2P36973 181 aa2.51□□□□□ -2.01
SOK2YMR016C APM3P38153 483 aa2.51□□□□□ -2.01
SOK2YMR016C PHO12P38693 467 aa2.51□□□□□ -2.01
SOK2YMR016C YHR097CP38809 366 aaKnown RBP2.51□□□□□ -2.01
SOK2YMR016C SAP185P40856 1058 aa2.51□□□□□ -2.01
SOK2YMR016C GSM1P42950 618 aa2.51□□□□□ -2.01
SOK2YMR016C CEF1Q03654 590 aaPredicted RBP2.51□□□□□ -2.01
SOK2YMR016C IZH3Q07959 543 aa2.51□□□□□ -2.01
SOK2YMR016C RGT2Q12300 763 aa2.51□□□□□ -2.01
SOK2YMR016C PGK1P00560 416 aaKnown RBP2.5□□□□□ -2.01
SOK2YMR016C SIR1P21691 654 aa2.5□□□□□ -2.01
SOK2YMR016C MRPL7P36519 292 aa2.5□□□□□ -2.01
SOK2YMR016C YPT10P38146 199 aa2.5□□□□□ -2.01
SOK2YMR016C FMP10P40098 244 aa2.5□□□□□ -2.01
SOK2YMR016C LRO1P40345 661 aa2.5□□□□□ -2.01
SOK2YMR016C MEP3P53390 489 aa2.5□□□□□ -2.01
SOK2YMR016C GTR1Q00582 310 aa2.5□□□□□ -2.01
SOK2YMR016C USA1Q03714 838 aa2.5□□□□□ -2.01
SOK2YMR016C VBA4Q04602 768 aaKnown RBP2.5□□□□□ -2.01
SOK2YMR016C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SOK2YMR016C NKP1Q12493 238 aa2.5□□□□□ -2.01
SOK2YMR016C HAP1P0CE41 1502 aa2.5□□□□□ -2.01
SOK2YMR016C PAN1P32521 1480 aa2.5□□□□□ -2.01
SOK2YMR016C ERG20P08524 352 aaKnown RBP2.5□□□□□ -2.01
SOK2YMR016C YCL049CP25577 312 aa2.5□□□□□ -2.01
SOK2YMR016C PRE2P30656 287 aaKnown RBP2.5□□□□□ -2.01
SOK2YMR016C TAM41P53230 385 aa2.5□□□□□ -2.01
SOK2YMR016C COX18P53239 316 aa2.5□□□□□ -2.01
SOK2YMR016C YNR061CP53747 219 aa2.5□□□□□ -2.01
SOK2YMR016C FDC1Q03034 503 aa2.5□□□□□ -2.01
SOK2YMR016C YKU80Q04437 629 aa2.5□□□□□ -2.01
SOK2YMR016C TY1B-BRQ12193 1756 aa2.49□□□□□ -2.01
SOK2YMR016C TY1B-GR3Q12316 1755 aa2.49□□□□□ -2.01
SOK2YMR016C TY1B-ORQ92393 1755 aa2.49□□□□□ -2.01
SOK2YMR016C RIM4P38741 713 aa2.49□□□□□ -2.01
SOK2YMR016C AXL2P38928 823 aa2.49□□□□□ -2.01
SOK2YMR016C STB2P46679 850 aa2.49□□□□□ -2.01
SOK2YMR016C MPS3P47069 682 aa2.49□□□□□ -2.01
SOK2YMR016C UPF3P48412 387 aaKnown RBP2.49□□□□□ -2.01
SOK2YMR016C YGR054WP53235 642 aaKnown RBP2.49□□□□□ -2.01
SOK2YMR016C HOL1P53389 586 aa2.49□□□□□ -2.01
SOK2YMR016C AIM6Q07716 390 aa2.49□□□□□ -2.01
SOK2YMR016C AAD4Q07747 329 aa2.49□□□□□ -2.01
SOK2YMR016C CHS5Q12114 671 aaKnown RBP2.49□□□□□ -2.01
SOK2YMR016C SUL2Q12325 893 aa2.49□□□□□ -2.01
SOK2YMR016C SPO14P36126 1683 aa2.49□□□□□ -2.01
SOK2YMR016C ERG11P10614 530 aa2.49□□□□□ -2.01
SOK2YMR016C BIK1P11709 440 aa2.49□□□□□ -2.01
SOK2YMR016C GUK1P15454 187 aaKnown RBP2.49□□□□□ -2.01
SOK2YMR016C MCM10P32354 571 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms