RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 GYP5Q12344 894 aa2.76□□□□□ -1.97
snR38snR38 PML39Q03760 334 aa2.75□□□□□ -1.97
snR38snR38 PEX29Q03370 554 aa2.74□□□□□ -1.97
snR38snR38 DCW1P36091 449 aa2.73□□□□□ -1.97
snR38snR38 MRM1P25270 412 aa2.72□□□□□ -1.97
snR38snR38 YFR006WP43590 535 aa2.7□□□□□ -1.98
snR38snR38 PTC2P39966 464 aaKnown RBP2.69□□□□□ -1.98
snR38snR38 YML082WQ04533 649 aaKnown RBP2.69□□□□□ -1.98
snR38snR38 YDR344CQ05510 147 aa2.69□□□□□ -1.98
snR38snR38 RAS1P01119 309 aa2.68□□□□□ -1.98
snR38snR38 YAH1Q12184 172 aaKnown RBP2.68□□□□□ -1.98
snR38snR38 GAR1P28007 205 aaKnown RBP2.67□□□□□ -1.98
snR38snR38 BNI4P53858 892 aa2.67□□□□□ -1.98
snR38snR38 HAP5Q02516 242 aa2.67□□□□□ -1.98
snR38snR38 GCR2Q01722 534 aa2.66□□□□□ -1.98
snR38snR38 AMS1P22855 1083 aa2.65□□□□□ -1.99
snR38snR38 RTG3P38165 486 aa2.65□□□□□ -1.99
snR38snR38 PSD2P53037 1138 aaKnown RBP2.65□□□□□ -1.99
snR38snR38 STS1P38637 319 aa2.64□□□□□ -1.99
snR38snR38 VPS29P38759 282 aa2.64□□□□□ -1.99
snR38snR38 MTC5Q03897 1148 aa2.62□□□□□ -1.99
snR38snR38 BRE2P43132 505 aa2.6□□□□□ -1.99
snR38snR38 GRE2Q12068 342 aaKnown RBP2.6□□□□□ -1.99
snR38snR38 MID1P41821 548 aa2.59□□□□□ -1.99
snR38snR38 GYP1Q08484 637 aa2.59□□□□□ -1.99
snR38snR38 YEL077CQ3E7X8 1277 aa2.59□□□□□ -1.99
snR38snR38 YLR271WQ06152 274 aa2.56□□□□□ -2
snR38snR38 SAS4Q04003 481 aa2.55□□□□□ -2
snR38snR38 BFR2Q06631 534 aaKnown RBP2.55□□□□□ -2
snR38snR38 MRF1P30775 413 aaPredicted RBP2.54□□□□□ -2
snR38snR38 ATH1P48016 1211 aa2.54□□□□□ -2
snR38snR38 GUT1P32190 709 aa2.52□□□□□ -2.01
snR38snR38 ARP8Q12386 881 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
snR38snR38 AI4P03878 556 aa2.51□□□□□ -2.01
snR38snR38 NMA111P53920 997 aa2.51□□□□□ -2.01
snR38snR38 MPC54Q08550 464 aa2.5□□□□□ -2.01
snR38snR38 ENV9Q08651 330 aa2.5□□□□□ -2.01
snR38snR38 MPH3P0CE00 602 aa2.49□□□□□ -2.01
snR38snR38 MET22P32179 357 aa2.47□□□□□ -2.01
snR38snR38 YDR444WQ04093 687 aa2.46□□□□□ -2.02
snR38snR38 DPL1Q05567 589 aa2.46□□□□□ -2.02
snR38snR38 ERG12P07277 443 aa2.44□□□□□ -2.02
snR38snR38 YPR015CQ12531 247 aa2.44□□□□□ -2.02
snR38snR38 NST1P53935 1240 aa2.43□□□□□ -2.02
snR38snR38 MIF2P35201 549 aa2.42□□□□□ -2.02
snR38snR38 MGA2P40578 1113 aa2.42□□□□□ -2.02
snR38snR38 ISU2Q12056 156 aa2.42□□□□□ -2.02
snR38snR38 SDH2P21801 266 aa2.41□□□□□ -2.02
snR38snR38 RAM1P22007 431 aa2.41□□□□□ -2.02
snR38snR38 PTC3P34221 468 aaKnown RBP2.41□□□□□ -2.02
snR38snR38 RCR1P38212 213 aa2.41□□□□□ -2.02
snR38snR38 AIR1P40507 360 aaKnown RBP2.41□□□□□ -2.02
snR38snR38 CDC4P07834 779 aa2.4□□□□□ -2.03
snR38snR38 CST9Q06032 482 aa2.4□□□□□ -2.03
snR38snR38 LCB5Q06147 687 aaKnown RBP2.4□□□□□ -2.03
snR38snR38 YDL176WQ12027 708 aa2.39□□□□□ -2.03
snR38snR38 NRD1P53617 575 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
snR38snR38 SOL3P38858 249 aa2.37□□□□□ -2.03
snR38snR38 TRK2P28584 889 aa2.36□□□□□ -2.03
snR38snR38 SLI15P38283 698 aa2.36□□□□□ -2.03
snR38snR38 PUS1Q12211 544 aaKnown RBP2.36□□□□□ -2.03
snR38snR38 ILV3P39522 585 aaKnown RBP2.35□□□□□ -2.03
snR38snR38 PRT1P06103 763 aaKnown RBP2.34□□□□□ -2.03
snR38snR38 RPP1BP10622 106 aaKnown RBP2.34□□□□□ -2.03
snR38snR38 SSP1P38871 571 aa2.34□□□□□ -2.03
snR38snR38 LSB3P43603 459 aaKnown RBP2.33□□□□□ -2.04
snR38snR38 MAK11P20484 414 aaKnown RBP2.32□□□□□ -2.04
snR38snR38 ICP55P40051 511 aa2.32□□□□□ -2.04
snR38snR38 CLA4P48562 842 aa2.32□□□□□ -2.04
snR38snR38 YGR035CP53222 116 aa2.32□□□□□ -2.04
snR38snR38 YGR273CP53329 174 aa2.32□□□□□ -2.04
snR38snR38 YPR204WQ08995 1032 aa2.32□□□□□ -2.04
snR38snR38 PDR1P12383 1068 aa2.31□□□□□ -2.04
snR38snR38 CST6P40535 587 aa2.31□□□□□ -2.04
snR38snR38 HED1Q03937 162 aa2.31□□□□□ -2.04
snR38snR38 LAM6Q08001 693 aa2.31□□□□□ -2.04
snR38snR38 SPT16P32558 1035 aaKnown RBP2.3□□□□□ -2.04
snR38snR38 EDS1P38073 919 aa2.3□□□□□ -2.04
snR38snR38 HST3P53687 447 aa2.3□□□□□ -2.04
snR38snR38 RRD1P40454 393 aaKnown RBP2.29□□□□□ -2.04
snR38snR38 CAF120P53836 1060 aa2.29□□□□□ -2.04
snR38snR38 FRK1Q03002 865 aaPredicted RBP2.29□□□□□ -2.04
snR38snR38 PAT1P25644 796 aaKnown RBP2.27□□□□□ -2.05
snR38snR38 ASH1P34233 588 aa2.27□□□□□ -2.05
snR38snR38 YLR346CQ06139 101 aa2.27□□□□□ -2.05
snR38snR38 PHM7Q12252 991 aa2.27□□□□□ -2.05
snR38snR38 AFT1P22149 690 aa2.26□□□□□ -2.05
snR38snR38 COQ8P27697 501 aa2.26□□□□□ -2.05
snR38snR38 NPL4P33755 580 aa2.26□□□□□ -2.05
snR38snR38 ACO2P39533 789 aa2.26□□□□□ -2.05
snR38snR38 BUD20Q08004 166 aaPredicted RBP2.26□□□□□ -2.05
snR38snR38 NOP53Q12080 455 aaKnown RBP2.26□□□□□ -2.05
snR38snR38 TFA1P36100 482 aa2.25□□□□□ -2.05
snR38snR38 CDC73Q06697 393 aa2.25□□□□□ -2.05
snR38snR38 BDP1P46678 594 aa2.24□□□□□ -2.05
snR38snR38 SBP1P10080 294 aaKnown RBP2.23□□□□□ -2.05
snR38snR38 PEX21P50091 288 aa2.23□□□□□ -2.05
snR38snR38 HPF1Q05164 967 aa2.23□□□□□ -2.05
snR38snR38 KEX1P09620 729 aa2.21□□□□□ -2.06
snR38snR38 YJR115WP47152 169 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms