RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C TY1B-ER2Q03619 1755 aa5.75□□□□□ -1.49
GDE1YPL110C TY1B-MR1Q04214 1755 aa5.75□□□□□ -1.49
GDE1YPL110C TY1B-MR2Q04670 1755 aaKnown RBP5.75□□□□□ -1.49
GDE1YPL110C TY1B-LR1Q12088 1755 aaKnown RBP5.75□□□□□ -1.49
GDE1YPL110C TY1B-NL1Q12112 1755 aa5.75□□□□□ -1.49
GDE1YPL110C TY1B-GR1Q12141 1755 aa5.75□□□□□ -1.49
GDE1YPL110C TY1B-BLQ12490 1755 aa5.75□□□□□ -1.49
GDE1YPL110C SPT7P35177 1332 aa5.74□□□□□ -1.49
GDE1YPL110C MLP2P40457 1679 aa5.71□□□□□ -1.49
GDE1YPL110C QCR6P00127 147 aa5.71□□□□□ -1.5
GDE1YPL110C HSP82P02829 709 aaKnown RBP5.71□□□□□ -1.5
GDE1YPL110C RPO31P04051 1460 aa5.71□□□□□ -1.5
GDE1YPL110C MDG1P53885 366 aa5.7□□□□□ -1.5
GDE1YPL110C RPA190P10964 1664 aaKnown RBP5.7□□□□□ -1.5
GDE1YPL110C TOP1P04786 769 aa5.69□□□□□ -1.5
GDE1YPL110C YGR130CP53278 816 aa5.69□□□□□ -1.5
GDE1YPL110C ENP1P38333 483 aaKnown RBP5.68□□□□□ -1.5
GDE1YPL110C RPO21P04050 1733 aaKnown RBP5.67□□□□□ -1.5
GDE1YPL110C RIX1P38883 763 aaPredicted RBP5.67□□□□□ -1.5
GDE1YPL110C YTA7P40340 1379 aa5.66□□□□□ -1.5
GDE1YPL110C UFD4P33202 1483 aa5.66□□□□□ -1.5
GDE1YPL110C FPR3P38911 411 aaKnown RBP5.66□□□□□ -1.5
GDE1YPL110C YCF1P39109 1515 aaKnown RBP5.65□□□□□ -1.5
GDE1YPL110C POL1P13382 1468 aa5.65□□□□□ -1.5
GDE1YPL110C DNA2P38859 1522 aa5.65□□□□□ -1.51
GDE1YPL110C TIF4632P39936 914 aaKnown RBP5.64□□□□□ -1.51
GDE1YPL110C MDS3P53094 1487 aa5.64□□□□□ -1.51
GDE1YPL110C IRC20Q06554 1556 aa5.64□□□□□ -1.51
GDE1YPL110C PSH1Q12161 406 aa5.63□□□□□ -1.51
GDE1YPL110C SPT2P06843 333 aaPredicted RBP5.62□□□□□ -1.51
GDE1YPL110C PTP3P40048 928 aa5.62□□□□□ -1.51
GDE1YPL110C NTE1Q04958 1679 aa5.62□□□□□ -1.51
GDE1YPL110C MMS22Q06164 1454 aa5.61□□□□□ -1.51
GDE1YPL110C VPS4P52917 437 aa5.61□□□□□ -1.51
GDE1YPL110C HIF1Q12373 385 aa5.61□□□□□ -1.51
GDE1YPL110C SCC2Q04002 1493 aa5.61□□□□□ -1.51
GDE1YPL110C SPC110P32380 944 aa5.6□□□□□ -1.51
GDE1YPL110C PIL1P53252 339 aaKnown RBP5.6□□□□□ -1.51
GDE1YPL110C RPN1P38764 993 aaKnown RBP5.59□□□□□ -1.51
GDE1YPL110C SEC3P33332 1336 aaKnown RBP5.59□□□□□ -1.51
GDE1YPL110C BUD4P47136 1447 aa5.59□□□□□ -1.51
GDE1YPL110C NOP8Q08287 484 aaPredicted RBP5.59□□□□□ -1.52
GDE1YPL110C MYO4P32492 1471 aa5.58□□□□□ -1.52
GDE1YPL110C STH1P32597 1359 aa5.57□□□□□ -1.52
GDE1YPL110C SPT16P32558 1035 aaKnown RBP5.57□□□□□ -1.52
GDE1YPL110C RPS0AP32905 252 aaKnown RBP5.57□□□□□ -1.52
GDE1YPL110C CLC1P17891 233 aa5.57□□□□□ -1.52
GDE1YPL110C TLG1Q03322 224 aa5.57□□□□□ -1.52
GDE1YPL110C RLP24Q07915 199 aaKnown RBP5.57□□□□□ -1.52
GDE1YPL110C PDR5P33302 1511 aaKnown RBP5.57□□□□□ -1.52
GDE1YPL110C YNL011CP53980 444 aa5.56□□□□□ -1.52
GDE1YPL110C SPT21P35209 758 aa5.56□□□□□ -1.52
GDE1YPL110C FPR4Q06205 392 aaPredicted RBP5.56□□□□□ -1.52
GDE1YPL110C NMD2P38798 1089 aaKnown RBP5.55□□□□□ -1.52
GDE1YPL110C BRL1P38770 471 aa5.55□□□□□ -1.52
GDE1YPL110C NHA1Q99271 985 aa5.55□□□□□ -1.52
GDE1YPL110C IME2P32581 645 aa5.53□□□□□ -1.52
GDE1YPL110C YOR1P53049 1477 aa5.53□□□□□ -1.52
GDE1YPL110C GIN4Q12263 1142 aa5.53□□□□□ -1.52
GDE1YPL110C CDC25P04821 1589 aa5.52□□□□□ -1.53
GDE1YPL110C SMC4Q12267 1418 aa5.52□□□□□ -1.53
GDE1YPL110C ULS1Q08562 1619 aa5.5□□□□□ -1.53
GDE1YPL110C PDR12Q02785 1511 aa5.5□□□□□ -1.53
GDE1YPL110C TOA1P32773 286 aa5.5□□□□□ -1.53
GDE1YPL110C ATG36P46983 293 aa5.5□□□□□ -1.53
GDE1YPL110C YML020WQ03722 664 aa5.5□□□□□ -1.53
GDE1YPL110C FUN12P39730 1002 aaKnown RBP5.5□□□□□ -1.53
GDE1YPL110C CKB1P43639 278 aa5.5□□□□□ -1.53
GDE1YPL110C STU1P38198 1513 aa5.5□□□□□ -1.53
GDE1YPL110C BYE1P36106 594 aa5.5□□□□□ -1.53
GDE1YPL110C RKR1Q04781 1562 aa5.49□□□□□ -1.53
GDE1YPL110C YRF1-1P0CX20 1796 aa5.49□□□□□ -1.53
GDE1YPL110C YRF1-5P0CX21 1796 aa5.49□□□□□ -1.53
GDE1YPL110C YRF1-8P0CX22 1796 aa5.49□□□□□ -1.53
GDE1YPL110C MPP10P47083 593 aaKnown RBP5.49□□□□□ -1.53
GDE1YPL110C SUB1P54000 292 aaKnown RBP5.49□□□□□ -1.53
GDE1YPL110C RNA1P11745 407 aaKnown RBP5.48□□□□□ -1.53
GDE1YPL110C VPS72Q03388 795 aa5.48□□□□□ -1.53
GDE1YPL110C PET111P08468 800 aa5.48□□□□□ -1.53
GDE1YPL110C YBT1P32386 1661 aa5.48□□□□□ -1.53
GDE1YPL110C SPO14P36126 1683 aa5.47□□□□□ -1.53
GDE1YPL110C ESC1Q03661 1658 aaKnown RBP5.46□□□□□ -1.53
GDE1YPL110C SSP1P38871 571 aa5.46□□□□□ -1.54
GDE1YPL110C PEA2P40091 420 aa5.45□□□□□ -1.54
GDE1YPL110C SWE1P32944 819 aa5.45□□□□□ -1.54
GDE1YPL110C BRN1P38170 754 aa5.45□□□□□ -1.54
GDE1YPL110C NST1P53935 1240 aa5.45□□□□□ -1.54
GDE1YPL110C GRX3Q03835 250 aa5.44□□□□□ -1.54
GDE1YPL110C YSH1Q06224 779 aaPredicted RBP5.44□□□□□ -1.54
GDE1YPL110C SSA1P10591 642 aaKnown RBP5.44□□□□□ -1.54
GDE1YPL110C SSA2P10592 639 aaKnown RBP5.44□□□□□ -1.54
GDE1YPL110C ETT1Q08421 412 aaKnown RBP5.44□□□□□ -1.54
GDE1YPL110C SAP190P36123 1033 aa5.44□□□□□ -1.54
GDE1YPL110C TRM732Q03496 1420 aa5.43□□□□□ -1.54
GDE1YPL110C CHC1P22137 1653 aaKnown RBP5.43□□□□□ -1.54
GDE1YPL110C TAN1P53072 289 aaPredicted RBP5.43□□□□□ -1.54
GDE1YPL110C BPT1P14772 1559 aa5.42□□□□□ -1.54
GDE1YPL110C CDC11P32458 415 aa5.42□□□□□ -1.54
GDE1YPL110C SIC1P38634 284 aa5.42□□□□□ -1.54
GDE1YPL110C APL5Q08951 932 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms