RNA–Protein interactions for RNA: YPL037C

EGD1, Transcript of Subunit beta1 of the nascent polypeptide-associated complex (NAC), yeast

Gene EGD1, Length 474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EGD1	YPL037C	YNL035C	P53962	389 aa	Known RBP	5.39	□□□□□ -1.55
EGD1	YPL037C	LDB19	Q12502	818 aa		5.39	□□□□□ -1.55
EGD1	YPL037C	SET1	P38827	1080 aa	Known RBP	5.37	□□□□□ -1.55
EGD1	YPL037C	AIR2	Q12476	344 aa	Known RBP	5.36	□□□□□ -1.55
EGD1	YPL037C	PTC4	P38089	393 aa		5.35	□□□□□ -1.55
EGD1	YPL037C	RTG1	P32607	177 aa		5.34	□□□□□ -1.55
EGD1	YPL037C	DAN4	P47179	1161 aa		5.34	□□□□□ -1.55
EGD1	YPL037C	YPR148C	Q06523	435 aa		5.34	□□□□□ -1.55
EGD1	YPL037C	DCW1	P36091	449 aa		5.33	□□□□□ -1.56
EGD1	YPL037C	YEL023C	P39992	682 aa		5.33	□□□□□ -1.56
EGD1	YPL037C	TFG1	P41895	735 aa	Predicted RBP	5.32	□□□□□ -1.56
EGD1	YPL037C	NCR1	Q12200	1170 aa		5.32	□□□□□ -1.56
EGD1	YPL037C	AI4	P03878	556 aa		5.31	□□□□□ -1.56
EGD1	YPL037C	YJL171C	P46992	396 aa		5.3	□□□□□ -1.56
EGD1	YPL037C	NST1	P53935	1240 aa		5.3	□□□□□ -1.56
EGD1	YPL037C	MPH3	P0CE00	602 aa		5.29	□□□□□ -1.56
EGD1	YPL037C	YGR273C	P53329	174 aa		5.28	□□□□□ -1.56
EGD1	YPL037C	YDL129W	Q07555	291 aa		5.28	□□□□□ -1.56
EGD1	YPL037C	BMT6	Q12291	365 aa		5.28	□□□□□ -1.56
EGD1	YPL037C	DMA1	P38823	416 aa		5.26	□□□□□ -1.57
EGD1	YPL037C	SOL3	P38858	249 aa		5.26	□□□□□ -1.57
EGD1	YPL037C	SAS10	Q12136	610 aa	Predicted RBP	5.26	□□□□□ -1.57
EGD1	YPL037C	CKB1	P43639	278 aa		5.24	□□□□□ -1.57
EGD1	YPL037C	MAK21	Q12176	1025 aa	Known RBP	5.23	□□□□□ -1.57
EGD1	YPL037C	REF2	P42073	533 aa	Predicted RBP	5.2	□□□□□ -1.58
EGD1	YPL037C	KEX1	P09620	729 aa		5.19	□□□□□ -1.58
EGD1	YPL037C	UBP14	P38237	781 aa	Known RBP	5.19	□□□□□ -1.58
EGD1	YPL037C	RPP1B	P10622	106 aa	Known RBP	5.18	□□□□□ -1.58
EGD1	YPL037C	SAP30	P38429	201 aa		5.18	□□□□□ -1.58
EGD1	YPL037C	PML39	Q03760	334 aa		5.18	□□□□□ -1.58
EGD1	YPL037C	YLR326W	Q06170	240 aa	Known RBP	5.18	□□□□□ -1.58
EGD1	YPL037C	CHL1	P22516	861 aa	Predicted RBP	5.17	□□□□□ -1.58
EGD1	YPL037C	ILV3	P39522	585 aa	Known RBP	5.17	□□□□□ -1.58
EGD1	YPL037C	VPS70	P47161	811 aa		5.17	□□□□□ -1.58
EGD1	YPL037C	PRE3	P38624	215 aa		5.16	□□□□□ -1.58
EGD1	YPL037C	ARH1	P48360	493 aa		5.16	□□□□□ -1.58
EGD1	YPL037C	RAD54	P32863	898 aa		5.15	□□□□□ -1.59
EGD1	YPL037C	COX6	P00427	148 aa		5.14	□□□□□ -1.59
EGD1	YPL037C	SLI15	P38283	698 aa		5.14	□□□□□ -1.59
EGD1	YPL037C	KIC1	P38692	1080 aa		5.14	□□□□□ -1.59
EGD1	YPL037C	PEX29	Q03370	554 aa		5.14	□□□□□ -1.59
EGD1	YPL037C	VHR2	P40041	505 aa		5.13	□□□□□ -1.59
EGD1	YPL037C	YDR090C	Q03193	310 aa		5.13	□□□□□ -1.59
EGD1	YPL037C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
EGD1	YPL037C	DPL1	Q05567	589 aa		5.12	□□□□□ -1.59
EGD1	YPL037C	MPC54	Q08550	464 aa		5.12	□□□□□ -1.59
EGD1	YPL037C	SPT23	P35210	1082 aa		5.11	□□□□□ -1.59
EGD1	YPL037C	BNI4	P53858	892 aa		5.11	□□□□□ -1.59
EGD1	YPL037C	HAP5	Q02516	242 aa		5.11	□□□□□ -1.59
EGD1	YPL037C	PBS2	P08018	668 aa		5.1	□□□□□ -1.59
EGD1	YPL037C	DSF2	P38213	736 aa		5.1	□□□□□ -1.59
EGD1	YPL037C	MID1	P41821	548 aa		5.1	□□□□□ -1.59
EGD1	YPL037C	ELP4	Q02884	456 aa	Known RBP	5.1	□□□□□ -1.59
EGD1	YPL037C	ISU2	Q12056	156 aa		5.1	□□□□□ -1.59
EGD1	YPL037C	GAP1	P19145	602 aa	Predicted RBP	5.08	□□□□□ -1.6
EGD1	YPL037C	CSC1	Q06538	782 aa		5.08	□□□□□ -1.6
EGD1	YPL037C	TFB4	Q12004	338 aa		5.08	□□□□□ -1.6
EGD1	YPL037C	YML082W	Q04533	649 aa	Known RBP	5.07	□□□□□ -1.6
EGD1	YPL037C	BCK2	P33306	851 aa		5.06	□□□□□ -1.6
EGD1	YPL037C	NMA111	P53920	997 aa		5.06	□□□□□ -1.6
EGD1	YPL037C	PSE1	P32337	1089 aa	Known RBP	5.04	□□□□□ -1.6
EGD1	YPL037C	ORC6	P38826	435 aa		5.04	□□□□□ -1.6
EGD1	YPL037C	PTC2	P39966	464 aa	Known RBP	5.04	□□□□□ -1.6
EGD1	YPL037C	MAM3	Q12296	706 aa		5.04	□□□□□ -1.6
EGD1	YPL037C	CDC73	Q06697	393 aa		5.03	□□□□□ -1.6
EGD1	YPL037C	CLB5	P30283	435 aa		5.02	□□□□□ -1.61
EGD1	YPL037C	XDJ1	P39102	459 aa		5.01	□□□□□ -1.61
EGD1	YPL037C	PEX21	P50091	288 aa		5.01	□□□□□ -1.61
EGD1	YPL037C	SPB4	P25808	606 aa	Predicted RBP	5	□□□□□ -1.61
EGD1	YPL037C	YDR344C	Q05510	147 aa		5	□□□□□ -1.61
EGD1	YPL037C	RAM1	P22007	431 aa		4.98	□□□□□ -1.61
EGD1	YPL037C	MVP1	P40959	511 aa	Known RBP	4.98	□□□□□ -1.61
EGD1	YPL037C	LEU3	P08638	886 aa		4.97	□□□□□ -1.61
EGD1	YPL037C	RGR1	P19263	1082 aa		4.97	□□□□□ -1.61
EGD1	YPL037C	VRP1	P37370	817 aa		4.97	□□□□□ -1.61
EGD1	YPL037C	IES2	P40154	320 aa		4.97	□□□□□ -1.61
EGD1	YPL037C	NUP42	P49686	430 aa	Known RBP	4.97	□□□□□ -1.61
EGD1	YPL037C	SAS4	Q04003	481 aa		4.97	□□□□□ -1.61
EGD1	YPL037C	YNR021W	P53723	404 aa	Known RBP	4.95	□□□□□ -1.62
EGD1	YPL037C	YRR1	Q12172	810 aa		4.94	□□□□□ -1.62
EGD1	YPL037C	TUM1	Q08686	304 aa	Known RBP	4.93	□□□□□ -1.62
EGD1	YPL037C	YPR109W	Q06104	294 aa		4.92	□□□□□ -1.62
EGD1	YPL037C	AIM7	Q12156	149 aa		4.92	□□□□□ -1.62
EGD1	YPL037C	NUD1	P32336	851 aa		4.91	□□□□□ -1.62
EGD1	YPL037C	NPL4	P33755	580 aa		4.91	□□□□□ -1.62
EGD1	YPL037C	RTF1	P53064	558 aa		4.91	□□□□□ -1.62
EGD1	YPL037C	PDR1	P12383	1068 aa		4.9	□□□□□ -1.63
EGD1	YPL037C	YPR015C	Q12531	247 aa		4.9	□□□□□ -1.63
EGD1	YPL037C	MRF1	P30775	413 aa	Predicted RBP	4.89	□□□□□ -1.63
EGD1	YPL037C	TEA1	P47988	759 aa		4.89	□□□□□ -1.63
EGD1	YPL037C	PRT1	P06103	763 aa	Known RBP	4.88	□□□□□ -1.63
EGD1	YPL037C	SIT4	P20604	311 aa		4.88	□□□□□ -1.63
EGD1	YPL037C	DIT2	P21595	489 aa		4.88	□□□□□ -1.63
EGD1	YPL037C	STR2	P47164	639 aa		4.88	□□□□□ -1.63
EGD1	YPL037C	BUD20	Q08004	166 aa	Predicted RBP	4.87	□□□□□ -1.63
EGD1	YPL037C	GYP1	Q08484	637 aa		4.87	□□□□□ -1.63
EGD1	YPL037C	RPN1	P38764	993 aa	Known RBP	4.86	□□□□□ -1.63
EGD1	YPL037C	ISM1	P48526	1002 aa		4.86	□□□□□ -1.63
EGD1	YPL037C	PAT1	P25644	796 aa	Known RBP	4.85	□□□□□ -1.63
EGD1	YPL037C	ATF2	P53296	535 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms