RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C DPS1P04802 557 aaKnown RBP7.44□□□□□ -1.22
RPA43YOR340C DAN4P47179 1161 aa7.42□□□□□ -1.22
RPA43YOR340C JIP4Q03361 876 aa7.42□□□□□ -1.22
RPA43YOR340C VRP1P37370 817 aa7.4□□□□□ -1.22
RPA43YOR340C TFG1P41895 735 aaPredicted RBP7.38□□□□□ -1.23
RPA43YOR340C GYP5Q12344 894 aa7.37□□□□□ -1.23
RPA43YOR340C RAM2P29703 316 aa7.35□□□□□ -1.23
RPA43YOR340C HTA1P04911 132 aaKnown RBP7.34□□□□□ -1.23
RPA43YOR340C HTA2P04912 132 aa7.34□□□□□ -1.23
RPA43YOR340C YDL129WQ07555 291 aa7.34□□□□□ -1.23
RPA43YOR340C PTC4P38089 393 aa7.31□□□□□ -1.24
RPA43YOR340C YEL023CP39992 682 aa7.3□□□□□ -1.24
RPA43YOR340C YDR344CQ05510 147 aa7.3□□□□□ -1.24
RPA43YOR340C DMA1P38823 416 aa7.29□□□□□ -1.24
RPA43YOR340C DCW1P36091 449 aa7.28□□□□□ -1.24
RPA43YOR340C MAK11P20484 414 aaKnown RBP7.26□□□□□ -1.25
RPA43YOR340C MIF2P35201 549 aa7.21□□□□□ -1.26
RPA43YOR340C GRE2Q12068 342 aaKnown RBP7.21□□□□□ -1.26
RPA43YOR340C EDS1P38073 919 aa7.2□□□□□ -1.26
RPA43YOR340C COQ8P27697 501 aa7.17□□□□□ -1.26
RPA43YOR340C GUT1P32190 709 aa7.16□□□□□ -1.26
RPA43YOR340C PTC3P34221 468 aaKnown RBP7.15□□□□□ -1.26
RPA43YOR340C NST1P53935 1240 aa7.14□□□□□ -1.27
RPA43YOR340C ATH1P48016 1211 aa7.13□□□□□ -1.27
RPA43YOR340C PML39Q03760 334 aa7.13□□□□□ -1.27
RPA43YOR340C ARH1P48360 493 aa7.09□□□□□ -1.27
RPA43YOR340C ELP4Q02884 456 aaKnown RBP7.07□□□□□ -1.28
RPA43YOR340C AI4P03878 556 aa7.05□□□□□ -1.28
RPA43YOR340C SOL3P38858 249 aa7.05□□□□□ -1.28
RPA43YOR340C MPH3P0CE00 602 aa7.04□□□□□ -1.28
RPA43YOR340C SET1P38827 1080 aaKnown RBP7.04□□□□□ -1.28
RPA43YOR340C NOP53Q12080 455 aaKnown RBP7.04□□□□□ -1.28
RPA43YOR340C MID1P41821 548 aa7.02□□□□□ -1.29
RPA43YOR340C SPT23P35210 1082 aa6.99□□□□□ -1.29
RPA43YOR340C ILV3P39522 585 aaKnown RBP6.98□□□□□ -1.29
RPA43YOR340C BNI4P53858 892 aa6.95□□□□□ -1.3
RPA43YOR340C HAP5Q02516 242 aa6.95□□□□□ -1.3
RPA43YOR340C YPL062WQ02781 134 aa6.95□□□□□ -1.3
RPA43YOR340C PEX29Q03370 554 aa6.95□□□□□ -1.3
RPA43YOR340C YGR273CP53329 174 aa6.94□□□□□ -1.3
RPA43YOR340C YML082WQ04533 649 aaKnown RBP6.92□□□□□ -1.3
RPA43YOR340C MPC54Q08550 464 aa6.91□□□□□ -1.3
RPA43YOR340C IFH1P39520 1085 aa6.9□□□□□ -1.3
RPA43YOR340C SAS10Q12136 610 aaPredicted RBP6.9□□□□□ -1.3
RPA43YOR340C RAS1P01119 309 aa6.89□□□□□ -1.31
RPA43YOR340C PTC2P39966 464 aaKnown RBP6.87□□□□□ -1.31
RPA43YOR340C VPS70P47161 811 aa6.85□□□□□ -1.31
RPA43YOR340C YPR148CQ06523 435 aa6.85□□□□□ -1.31
RPA43YOR340C SLI15P38283 698 aa6.84□□□□□ -1.31
RPA43YOR340C KEX1P09620 729 aa6.83□□□□□ -1.32
RPA43YOR340C UBP14P38237 781 aaKnown RBP6.83□□□□□ -1.32
RPA43YOR340C NMA111P53920 997 aa6.83□□□□□ -1.32
RPA43YOR340C DPL1Q05567 589 aa6.83□□□□□ -1.32
RPA43YOR340C VHR2P40041 505 aa6.82□□□□□ -1.32
RPA43YOR340C YLR326WQ06170 240 aaKnown RBP6.81□□□□□ -1.32
RPA43YOR340C CKB1P43639 278 aa6.78□□□□□ -1.32
RPA43YOR340C PCS60P38137 543 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
RPA43YOR340C RAM1P22007 431 aa6.75□□□□□ -1.33
RPA43YOR340C ISU2Q12056 156 aa6.75□□□□□ -1.33
RPA43YOR340C YPR015CQ12531 247 aa6.75□□□□□ -1.33
RPA43YOR340C REF2P42073 533 aaPredicted RBP6.74□□□□□ -1.33
RPA43YOR340C YDR090CQ03193 310 aa6.74□□□□□ -1.33
RPA43YOR340C RAD54P32863 898 aa6.73□□□□□ -1.33
RPA43YOR340C TRK1P12685 1235 aa6.72□□□□□ -1.33
RPA43YOR340C SPB4P25808 606 aaPredicted RBP6.71□□□□□ -1.34
RPA43YOR340C CDC73Q06697 393 aa6.71□□□□□ -1.34
RPA43YOR340C PBS2P08018 668 aa6.68□□□□□ -1.34
RPA43YOR340C KIC1P38692 1080 aa6.66□□□□□ -1.34
RPA43YOR340C SAS4Q04003 481 aa6.65□□□□□ -1.34
RPA43YOR340C COX6P00427 148 aa6.64□□□□□ -1.35
RPA43YOR340C LEU3P08638 886 aa6.64□□□□□ -1.35
RPA43YOR340C AMS1P22855 1083 aa6.64□□□□□ -1.35
RPA43YOR340C DSF2P38213 736 aa6.62□□□□□ -1.35
RPA43YOR340C GYP1Q08484 637 aa6.62□□□□□ -1.35
RPA43YOR340C MAK21Q12176 1025 aaKnown RBP6.62□□□□□ -1.35
RPA43YOR340C MON2P48563 1636 aaPredicted RBP6.61□□□□□ -1.35
RPA43YOR340C RPP1BP10622 106 aaKnown RBP6.61□□□□□ -1.35
RPA43YOR340C PDR1P12383 1068 aa6.61□□□□□ -1.35
RPA43YOR340C SDH2P21801 266 aa6.61□□□□□ -1.35
RPA43YOR340C MAM3Q12296 706 aa6.6□□□□□ -1.35
RPA43YOR340C GAP1P19145 602 aaPredicted RBP6.58□□□□□ -1.36
RPA43YOR340C ORC6P38826 435 aa6.58□□□□□ -1.36
RPA43YOR340C IES2P40154 320 aa6.56□□□□□ -1.36
RPA43YOR340C CSC1Q06538 782 aa6.54□□□□□ -1.36
RPA43YOR340C YEL077CQ3E7X8 1277 aa6.54□□□□□ -1.36
RPA43YOR340C PEX21P50091 288 aa6.53□□□□□ -1.36
RPA43YOR340C TAF7Q05021 590 aa6.53□□□□□ -1.36
RPA43YOR340C YRR1Q12172 810 aa6.53□□□□□ -1.36
RPA43YOR340C INO80P53115 1489 aa6.53□□□□□ -1.36
RPA43YOR340C MRF1P30775 413 aaPredicted RBP6.52□□□□□ -1.37
RPA43YOR340C TUM1Q08686 304 aaKnown RBP6.52□□□□□ -1.37
RPA43YOR340C LEO1P38439 464 aa6.51□□□□□ -1.37
RPA43YOR340C MVP1P40959 511 aaKnown RBP6.51□□□□□ -1.37
RPA43YOR340C BUD20Q08004 166 aaPredicted RBP6.51□□□□□ -1.37
RPA43YOR340C TFB4Q12004 338 aa6.51□□□□□ -1.37
RPA43YOR340C RGR1P19263 1082 aa6.5□□□□□ -1.37
RPA43YOR340C PRT1P06103 763 aaKnown RBP6.49□□□□□ -1.37
RPA43YOR340C RPN1P38764 993 aaKnown RBP6.49□□□□□ -1.37
RPA43YOR340C STR2P47164 639 aa6.48□□□□□ -1.37
RPA43YOR340C NUP42P49686 430 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms