RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W BCK2P33306 851 aa9.81□□□□□ -0.84
RCL1YOL010W RCR1P38212 213 aa9.8□□□□□ -0.84
RCL1YOL010W JIP4Q03361 876 aa9.8□□□□□ -0.84
RCL1YOL010W ECM5Q03214 1411 aa9.8□□□□□ -0.84
RCL1YOL010W SPT6P23615 1451 aaKnown RBP9.79□□□□□ -0.84
RCL1YOL010W HSL1P34244 1518 aa9.79□□□□□ -0.84
RCL1YOL010W YDL129WQ07555 291 aa9.79□□□□□ -0.84
RCL1YOL010W GYP5Q12344 894 aa9.79□□□□□ -0.84
RCL1YOL010W ABP1P15891 592 aaKnown RBP9.76□□□□□ -0.85
RCL1YOL010W CHL1P22516 861 aaPredicted RBP9.76□□□□□ -0.85
RCL1YOL010W HTA1P04911 132 aaKnown RBP9.74□□□□□ -0.85
RCL1YOL010W HTA2P04912 132 aa9.74□□□□□ -0.85
RCL1YOL010W DCW1P36091 449 aa9.73□□□□□ -0.85
RCL1YOL010W PRE3P38624 215 aa9.72□□□□□ -0.85
RCL1YOL010W SGS1P35187 1447 aa9.7□□□□□ -0.86
RCL1YOL010W YEL023CP39992 682 aa9.69□□□□□ -0.86
RCL1YOL010W PTC4P38089 393 aa9.67□□□□□ -0.86
RCL1YOL010W BUD4P47136 1447 aa9.65□□□□□ -0.86
RCL1YOL010W THO2P53552 1597 aaKnown RBP9.63□□□□□ -0.87
RCL1YOL010W MDS3P53094 1487 aa9.63□□□□□ -0.87
RCL1YOL010W REV3P14284 1504 aa9.57□□□□□ -0.88
RCL1YOL010W YDR344CQ05510 147 aa9.57□□□□□ -0.88
RCL1YOL010W VRP1P37370 817 aa9.55□□□□□ -0.88
RCL1YOL010W HIR3P47171 1648 aa9.54□□□□□ -0.88
RCL1YOL010W PML39Q03760 334 aa9.53□□□□□ -0.88
RCL1YOL010W XDJ1P39102 459 aa9.51□□□□□ -0.89
RCL1YOL010W GRE2Q12068 342 aaKnown RBP9.51□□□□□ -0.89
RCL1YOL010W ELP4Q02884 456 aaKnown RBP9.5□□□□□ -0.89
RCL1YOL010W MIF2P35201 549 aa9.49□□□□□ -0.89
RCL1YOL010W PEP1P32319 1579 aa9.43□□□□□ -0.9
RCL1YOL010W BPT1P14772 1559 aa9.41□□□□□ -0.9
RCL1YOL010W DPS1P04802 557 aaKnown RBP9.4□□□□□ -0.9
RCL1YOL010W ATH1P48016 1211 aa9.4□□□□□ -0.9
RCL1YOL010W ARH1P48360 493 aa9.37□□□□□ -0.91
RCL1YOL010W GUT1P32190 709 aa9.36□□□□□ -0.91
RCL1YOL010W MID1P41821 548 aa9.36□□□□□ -0.91
RCL1YOL010W PTC3P34221 468 aaKnown RBP9.35□□□□□ -0.91
RCL1YOL010W EDS1P38073 919 aa9.35□□□□□ -0.91
RCL1YOL010W MAK11P20484 414 aaKnown RBP9.32□□□□□ -0.92
RCL1YOL010W NST1P53935 1240 aa9.3□□□□□ -0.92
RCL1YOL010W XRN1P22147 1528 aaKnown RBP9.3□□□□□ -0.92
RCL1YOL010W PEX29Q03370 554 aa9.29□□□□□ -0.92
RCL1YOL010W ATG2P53855 1592 aa9.29□□□□□ -0.92
RCL1YOL010W RAM2P29703 316 aa9.27□□□□□ -0.93
RCL1YOL010W SPT23P35210 1082 aa9.26□□□□□ -0.93
RCL1YOL010W SOL3P38858 249 aa9.25□□□□□ -0.93
RCL1YOL010W YCF1P39109 1515 aaKnown RBP9.23□□□□□ -0.93
RCL1YOL010W MPH3P0CE00 602 aa9.21□□□□□ -0.94
RCL1YOL010W COQ8P27697 501 aa9.21□□□□□ -0.94
RCL1YOL010W HAP5Q02516 242 aa9.21□□□□□ -0.94
RCL1YOL010W AI4P03878 556 aa9.2□□□□□ -0.94
RCL1YOL010W ILV3P39522 585 aaKnown RBP9.18□□□□□ -0.94
RCL1YOL010W SRC1Q03707 834 aa9.17□□□□□ -0.94
RCL1YOL010W TAF2P23255 1407 aa9.14□□□□□ -0.95
RCL1YOL010W BNI4P53858 892 aa9.14□□□□□ -0.95
RCL1YOL010W PTC2P39966 464 aaKnown RBP9.13□□□□□ -0.95
RCL1YOL010W YML082WQ04533 649 aaKnown RBP9.1□□□□□ -0.95
RCL1YOL010W MPC54Q08550 464 aa9.1□□□□□ -0.95
RCL1YOL010W SKI3P17883 1432 aaKnown RBP9.09□□□□□ -0.95
RCL1YOL010W SSK2P53599 1579 aa9.07□□□□□ -0.96
RCL1YOL010W YGR273CP53329 174 aa9.05□□□□□ -0.96
RCL1YOL010W RGA2Q06407 1009 aa9.04□□□□□ -0.96
RCL1YOL010W MYO2P19524 1574 aaKnown RBP9.03□□□□□ -0.96
RCL1YOL010W NMA111P53920 997 aa9.03□□□□□ -0.96
RCL1YOL010W LTE1P07866 1435 aa9.01□□□□□ -0.97
RCL1YOL010W MET5P47169 1442 aa9□□□□□ -0.97
RCL1YOL010W SLI15P38283 698 aa8.99□□□□□ -0.97
RCL1YOL010W BNI1P41832 1953 aa8.98□□□□□ -0.97
RCL1YOL010W RAS1P01119 309 aa8.97□□□□□ -0.97
RCL1YOL010W CDC25P04821 1589 aa8.97□□□□□ -0.97
RCL1YOL010W RGA1P39083 1007 aa8.96□□□□□ -0.98
RCL1YOL010W DPL1Q05567 589 aa8.96□□□□□ -0.98
RCL1YOL010W UFD4P33202 1483 aa8.96□□□□□ -0.98
RCL1YOL010W NOP53Q12080 455 aaKnown RBP8.95□□□□□ -0.98
RCL1YOL010W YPR015CQ12531 247 aa8.94□□□□□ -0.98
RCL1YOL010W RPA190P10964 1664 aaKnown RBP8.94□□□□□ -0.98
RCL1YOL010W DNF1P32660 1571 aa8.92□□□□□ -0.98
RCL1YOL010W SIN3P22579 1536 aa8.91□□□□□ -0.98
RCL1YOL010W ITT1Q04638 464 aa8.91□□□□□ -0.98
RCL1YOL010W ESC1Q03661 1658 aaKnown RBP8.89□□□□□ -0.99
RCL1YOL010W RAM1P22007 431 aa8.87□□□□□ -0.99
RCL1YOL010W CHD1P32657 1468 aa8.87□□□□□ -0.99
RCL1YOL010W GEA2P39993 1459 aaKnown RBP8.86□□□□□ -0.99
RCL1YOL010W GYP1Q08484 637 aa8.85□□□□□ -0.99
RCL1YOL010W ISU2Q12056 156 aa8.85□□□□□ -0.99
RCL1YOL010W RKR1Q04781 1562 aa8.85□□□□□ -0.99
RCL1YOL010W MMS1Q06211 1407 aa8.83□□□□□ -1
RCL1YOL010W KEX1P09620 729 aa8.83□□□□□ -1
RCL1YOL010W ESP1Q03018 1630 aa8.83□□□□□ -1
RCL1YOL010W AMS1P22855 1083 aa8.81□□□□□ -1
RCL1YOL010W RPO31P04051 1460 aa8.81□□□□□ -1
RCL1YOL010W CDC73Q06697 393 aa8.8□□□□□ -1
RCL1YOL010W RQC2Q12532 1038 aaKnown RBP8.8□□□□□ -1
RCL1YOL010W SCC2Q04002 1493 aa8.79□□□□□ -1
RCL1YOL010W TRK1P12685 1235 aa8.79□□□□□ -1
RCL1YOL010W IRC20Q06554 1556 aa8.78□□□□□ -1
RCL1YOL010W PDR1P12383 1068 aa8.76□□□□□ -1.01
RCL1YOL010W PAN1P32521 1480 aa8.75□□□□□ -1.01
RCL1YOL010W YPK9Q12697 1472 aa8.73□□□□□ -1.01
RCL1YOL010W SDH2P21801 266 aa8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms