RNA–Protein interactions for RNA: YNR011C

PRP2, Transcript of RNA-dependent DExD/H-box ATPase, yeastyeast

Gene PRP2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP2YNR011C ATG2P53855 1592 aa8.3□□□□□ -1.08
PRP2YNR011C ATG36P46983 293 aa8.3□□□□□ -1.08
PRP2YNR011C RTS3P53289 263 aa8.29□□□□□ -1.08
PRP2YNR011C GRX3Q03835 250 aa8.29□□□□□ -1.08
PRP2YNR011C SPC110P32380 944 aa8.29□□□□□ -1.08
PRP2YNR011C SPT21P35209 758 aa8.28□□□□□ -1.08
PRP2YNR011C NMD2P38798 1089 aaKnown RBP8.28□□□□□ -1.08
PRP2YNR011C VPS4P52917 437 aa8.28□□□□□ -1.08
PRP2YNR011C OSW7P43611 510 aa8.26□□□□□ -1.09
PRP2YNR011C ISW1P38144 1129 aa8.25□□□□□ -1.09
PRP2YNR011C YMR196WQ04336 1088 aa8.24□□□□□ -1.09
PRP2YNR011C YSH1Q06224 779 aaPredicted RBP8.24□□□□□ -1.09
PRP2YNR011C KIP3P53086 805 aaKnown RBP8.23□□□□□ -1.09
PRP2YNR011C LAM6Q08001 693 aa8.22□□□□□ -1.09
PRP2YNR011C BUD21Q08492 214 aaPredicted RBP8.21□□□□□ -1.09
PRP2YNR011C CDC11P32458 415 aa8.2□□□□□ -1.1
PRP2YNR011C PEA2P40091 420 aa8.2□□□□□ -1.1
PRP2YNR011C HSC82P15108 705 aaKnown RBP8.19□□□□□ -1.1
PRP2YNR011C BPT1P14772 1559 aa8.19□□□□□ -1.1
PRP2YNR011C TAF13P11747 167 aa8.18□□□□□ -1.1
PRP2YNR011C SSP1P38871 571 aa8.18□□□□□ -1.1
PRP2YNR011C NAB3P38996 802 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
PRP2YNR011C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
PRP2YNR011C DAL5P15365 543 aa8.17□□□□□ -1.1
PRP2YNR011C MYO2P19524 1574 aaKnown RBP8.17□□□□□ -1.1
PRP2YNR011C HOS4P40480 1083 aa8.16□□□□□ -1.1
PRP2YNR011C PET111P08468 800 aa8.16□□□□□ -1.1
PRP2YNR011C YJR008WP47085 338 aa8.16□□□□□ -1.1
PRP2YNR011C NST1P53935 1240 aa8.16□□□□□ -1.1
PRP2YNR011C ETT1Q08421 412 aaKnown RBP8.16□□□□□ -1.1
PRP2YNR011C SEC3P33332 1336 aaKnown RBP8.15□□□□□ -1.1
PRP2YNR011C RPT2P40327 437 aaKnown RBP8.15□□□□□ -1.1
PRP2YNR011C NNF2P53253 936 aa8.15□□□□□ -1.1
PRP2YNR011C YML020WQ03722 664 aa8.15□□□□□ -1.1
PRP2YNR011C GEF1P37020 779 aa8.15□□□□□ -1.11
PRP2YNR011C SEC20P28791 383 aa8.14□□□□□ -1.11
PRP2YNR011C ESP1Q03018 1630 aa8.14□□□□□ -1.11
PRP2YNR011C SKI3P17883 1432 aaKnown RBP8.13□□□□□ -1.11
PRP2YNR011C TY4A-JP47023 414 aa8.13□□□□□ -1.11
PRP2YNR011C NOP7P53261 605 aaKnown RBP8.13□□□□□ -1.11
PRP2YNR011C AIM21P40563 679 aa8.12□□□□□ -1.11
PRP2YNR011C ZDS1P50111 915 aaKnown RBP8.12□□□□□ -1.11
PRP2YNR011C APL5Q08951 932 aaKnown RBP8.12□□□□□ -1.11
PRP2YNR011C YPK9Q12697 1472 aa8.11□□□□□ -1.11
PRP2YNR011C FAR11P53917 953 aa8.11□□□□□ -1.11
PRP2YNR011C MCM1P11746 286 aa8.1□□□□□ -1.11
PRP2YNR011C CFT2Q12102 859 aaPredicted RBP8.1□□□□□ -1.11
PRP2YNR011C PDR1P12383 1068 aa8.1□□□□□ -1.11
PRP2YNR011C CLC1P17891 233 aa8.09□□□□□ -1.11
PRP2YNR011C SSF1P38789 453 aaPredicted RBP8.09□□□□□ -1.11
PRP2YNR011C YCF1P39109 1515 aaKnown RBP8.09□□□□□ -1.12
PRP2YNR011C SEC9P40357 651 aa8.08□□□□□ -1.12
PRP2YNR011C BRE1Q07457 700 aaKnown RBP8.08□□□□□ -1.12
PRP2YNR011C MTR4P47047 1073 aaKnown RBP8.07□□□□□ -1.12
PRP2YNR011C MSH4P40965 878 aaPredicted RBP8.06□□□□□ -1.12
PRP2YNR011C NOP8Q08287 484 aaPredicted RBP8.06□□□□□ -1.12
PRP2YNR011C TAN1P53072 289 aaPredicted RBP8.06□□□□□ -1.12
PRP2YNR011C SAP190P36123 1033 aa8.05□□□□□ -1.12
PRP2YNR011C MEH1Q02205 184 aa8.05□□□□□ -1.12
PRP2YNR011C RCF1Q03713 159 aa8.05□□□□□ -1.12
PRP2YNR011C RAD2P07276 1031 aa8.04□□□□□ -1.12
PRP2YNR011C YDR341CQ05506 607 aaKnown RBP8.04□□□□□ -1.12
PRP2YNR011C RPO31P04051 1460 aa8.04□□□□□ -1.12
PRP2YNR011C DJP1P40564 432 aa8.04□□□□□ -1.12
PRP2YNR011C CBF5P33322 483 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
PRP2YNR011C RRP14P36080 434 aaKnown RBP8.03□□□□□ -1.12
PRP2YNR011C LEM3P42838 414 aa8.03□□□□□ -1.12
PRP2YNR011C PSK2Q08217 1101 aa8.03□□□□□ -1.12
PRP2YNR011C DOS2P54858 310 aa8.02□□□□□ -1.13
PRP2YNR011C RPN7Q06103 429 aaKnown RBP8.02□□□□□ -1.13
PRP2YNR011C YLL054CQ12244 843 aa8.02□□□□□ -1.13
PRP2YNR011C LTV1P34078 463 aa8.01□□□□□ -1.13
PRP2YNR011C SPC42P36094 363 aa8.01□□□□□ -1.13
PRP2YNR011C PKH1Q03407 766 aa8.01□□□□□ -1.13
PRP2YNR011C GAL11P19659 1081 aa8.01□□□□□ -1.13
PRP2YNR011C TAF2P23255 1407 aa8.01□□□□□ -1.13
PRP2YNR011C RAD51P25454 400 aa8.01□□□□□ -1.13
PRP2YNR011C BYE1P36106 594 aa8.01□□□□□ -1.13
PRP2YNR011C GIR2Q03768 265 aaPredicted RBP8.01□□□□□ -1.13
PRP2YNR011C SCC2Q04002 1493 aa8.01□□□□□ -1.13
PRP2YNR011C TY1B-AO13527 1196 aaKnown RBP8□□□□□ -1.13
PRP2YNR011C ECM16Q04217 1267 aaKnown RBP7.99□□□□□ -1.13
PRP2YNR011C VID30P53076 958 aa7.99□□□□□ -1.13
PRP2YNR011C SYH1Q02875 849 aaKnown RBP7.99□□□□□ -1.13
PRP2YNR011C CLF1Q12309 687 aaPredicted RBP7.99□□□□□ -1.13
PRP2YNR011C SIC1P38634 284 aa7.98□□□□□ -1.13
PRP2YNR011C NPR3P38742 1146 aa7.98□□□□□ -1.13
PRP2YNR011C AIM20P40451 204 aa7.98□□□□□ -1.13
PRP2YNR011C RSC8P43609 557 aaKnown RBP7.98□□□□□ -1.13
PRP2YNR011C MET5P47169 1442 aa7.97□□□□□ -1.13
PRP2YNR011C SSA4P22202 642 aaKnown RBP7.97□□□□□ -1.13
PRP2YNR011C MSH3P25336 1018 aa7.97□□□□□ -1.13
PRP2YNR011C SEC27P41811 889 aaKnown RBP7.97□□□□□ -1.13
PRP2YNR011C FAP1P53971 965 aa7.97□□□□□ -1.13
PRP2YNR011C PIM1P36775 1133 aa7.97□□□□□ -1.13
PRP2YNR011C ALD3P54114 506 aa7.97□□□□□ -1.13
PRP2YNR011C TAF1P46677 1066 aa7.96□□□□□ -1.14
PRP2YNR011C IMH1Q06704 911 aaKnown RBP7.96□□□□□ -1.14
PRP2YNR011C GDE1Q02979 1223 aa7.95□□□□□ -1.14
PRP2YNR011C MPE1P35728 441 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms