RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeastyeast

Gene PCL1, Length 840 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL1YNL289W LDB19Q12502 818 aa10.45□□□□□ -0.74
PCL1YNL289W SOL3P38858 249 aa10.42□□□□□ -0.74
PCL1YNL289W IFH1P39520 1085 aa10.4□□□□□ -0.74
PCL1YNL289W NST1P53935 1240 aa10.4□□□□□ -0.74
PCL1YNL289W SAS10Q12136 610 aaPredicted RBP10.4□□□□□ -0.74
PCL1YNL289W YEL023CP39992 682 aa10.37□□□□□ -0.75
PCL1YNL289W FKH1P40466 484 aa10.37□□□□□ -0.75
PCL1YNL289W RTG1P32607 177 aa10.35□□□□□ -0.75
PCL1YNL289W VPS70P47161 811 aa10.35□□□□□ -0.75
PCL1YNL289W DAN4P47179 1161 aa10.35□□□□□ -0.75
PCL1YNL289W YNL035CP53962 389 aaKnown RBP10.35□□□□□ -0.75
PCL1YNL289W YGR273CP53329 174 aa10.34□□□□□ -0.75
PCL1YNL289W JIP4Q03361 876 aa10.33□□□□□ -0.76
PCL1YNL289W AIR2Q12476 344 aaKnown RBP10.33□□□□□ -0.76
PCL1YNL289W PTC4P38089 393 aa10.31□□□□□ -0.76
PCL1YNL289W SEC61P32915 480 aa10.28□□□□□ -0.76
PCL1YNL289W ILV3P39522 585 aaKnown RBP10.28□□□□□ -0.76
PCL1YNL289W MPH3P0CE00 602 aa10.26□□□□□ -0.77
PCL1YNL289W AI4P03878 556 aa10.24□□□□□ -0.77
PCL1YNL289W NCR1Q12200 1170 aa10.24□□□□□ -0.77
PCL1YNL289W UBP14P38237 781 aaKnown RBP10.23□□□□□ -0.77
PCL1YNL289W VHR2P40041 505 aa10.22□□□□□ -0.77
PCL1YNL289W YLR326WQ06170 240 aaKnown RBP10.22□□□□□ -0.77
PCL1YNL289W KEX1P09620 729 aa10.2□□□□□ -0.78
PCL1YNL289W REF2P42073 533 aaPredicted RBP10.2□□□□□ -0.78
PCL1YNL289W CKB1P43639 278 aa10.18□□□□□ -0.78
PCL1YNL289W YDR090CQ03193 310 aa10.15□□□□□ -0.78
PCL1YNL289W PML39Q03760 334 aa10.15□□□□□ -0.78
PCL1YNL289W TFG1P41895 735 aaPredicted RBP10.13□□□□□ -0.79
PCL1YNL289W YDL129WQ07555 291 aa10.13□□□□□ -0.79
PCL1YNL289W PCS60P38137 543 aaKnown RBP RIP-Chip data10.12□□□□□ -0.79not detected
PCL1YNL289W MID1P41821 548 aa10.11□□□□□ -0.79
PCL1YNL289W SLI15P38283 698 aa10.1□□□□□ -0.79
PCL1YNL289W YJL171CP46992 396 aa10.1□□□□□ -0.79
PCL1YNL289W BMT6Q12291 365 aa10.1□□□□□ -0.79
PCL1YNL289W RAD54P32863 898 aa10.09□□□□□ -0.79
PCL1YNL289W PBS2P08018 668 aa10.08□□□□□ -0.8
PCL1YNL289W SAP30P38429 201 aa10.08□□□□□ -0.8
PCL1YNL289W COX6P00427 148 aa10.05□□□□□ -0.8
PCL1YNL289W MAK21Q12176 1025 aaKnown RBP10.04□□□□□ -0.8
PCL1YNL289W DSF2P38213 736 aa10.02□□□□□ -0.81
PCL1YNL289W YDR344CQ05510 147 aa10.02□□□□□ -0.81
PCL1YNL289W SPB4P25808 606 aaPredicted RBP10□□□□□ -0.81
PCL1YNL289W KIC1P38692 1080 aa10□□□□□ -0.81
PCL1YNL289W MPC54Q08550 464 aa9.99□□□□□ -0.81
PCL1YNL289W PEX29Q03370 554 aa9.97□□□□□ -0.81
PCL1YNL289W CDC73Q06697 393 aa9.97□□□□□ -0.81
PCL1YNL289W MAM3Q12296 706 aa9.95□□□□□ -0.82
PCL1YNL289W DPL1Q05567 589 aa9.93□□□□□ -0.82
PCL1YNL289W ORC6P38826 435 aa9.92□□□□□ -0.82
PCL1YNL289W IES2P40154 320 aa9.91□□□□□ -0.82
PCL1YNL289W ARH1P48360 493 aa9.91□□□□□ -0.82
PCL1YNL289W GAP1P19145 602 aaPredicted RBP9.88□□□□□ -0.83
PCL1YNL289W PRE3P38624 215 aa9.88□□□□□ -0.83
PCL1YNL289W NMA111P53920 997 aa9.88□□□□□ -0.83
PCL1YNL289W NUP42P49686 430 aaKnown RBP9.87□□□□□ -0.83
PCL1YNL289W ELP4Q02884 456 aaKnown RBP9.87□□□□□ -0.83
PCL1YNL289W HAP5Q02516 242 aa9.86□□□□□ -0.83
PCL1YNL289W CHL1P22516 861 aaPredicted RBP9.84□□□□□ -0.83
PCL1YNL289W RPP1BP10622 106 aaKnown RBP9.83□□□□□ -0.84
PCL1YNL289W ISU2Q12056 156 aa9.83□□□□□ -0.84
PCL1YNL289W DIT2P21595 489 aa9.82□□□□□ -0.84
PCL1YNL289W LEU3P08638 886 aa9.81□□□□□ -0.84
PCL1YNL289W CSC1Q06538 782 aa9.81□□□□□ -0.84
PCL1YNL289W RGR1P19263 1082 aa9.78□□□□□ -0.84
PCL1YNL289W SPT23P35210 1082 aa9.78□□□□□ -0.84
PCL1YNL289W MVP1P40959 511 aaKnown RBP9.78□□□□□ -0.84
PCL1YNL289W BNI4P53858 892 aa9.78□□□□□ -0.84
PCL1YNL289W PSE1P32337 1089 aaKnown RBP9.77□□□□□ -0.85
PCL1YNL289W TFB4Q12004 338 aa9.76□□□□□ -0.85
PCL1YNL289W PEX21P50091 288 aa9.74□□□□□ -0.85
PCL1YNL289W PDR1P12383 1068 aa9.73□□□□□ -0.85
PCL1YNL289W YRR1Q12172 810 aa9.73□□□□□ -0.85
PCL1YNL289W RAM1P22007 431 aa9.71□□□□□ -0.86
PCL1YNL289W YNR021WP53723 404 aaKnown RBP9.71□□□□□ -0.86
PCL1YNL289W TUM1Q08686 304 aaKnown RBP9.71□□□□□ -0.86
PCL1YNL289W PTC2P39966 464 aaKnown RBP9.7□□□□□ -0.86
PCL1YNL289W YPR109WQ06104 294 aa9.7□□□□□ -0.86
PCL1YNL289W YPR015CQ12531 247 aa9.69□□□□□ -0.86
PCL1YNL289W GLC3P32775 704 aa9.67□□□□□ -0.86
PCL1YNL289W YML082WQ04533 649 aaKnown RBP9.67□□□□□ -0.86
PCL1YNL289W BCK2P33306 851 aa9.63□□□□□ -0.87
PCL1YNL289W VRP1P37370 817 aa9.62□□□□□ -0.87
PCL1YNL289W NUD1P32336 851 aa9.61□□□□□ -0.87
PCL1YNL289W CLB5P30283 435 aa9.6□□□□□ -0.87
PCL1YNL289W STR2P47164 639 aa9.6□□□□□ -0.87
PCL1YNL289W TEA1P47988 759 aa9.59□□□□□ -0.87
PCL1YNL289W ISM1P48526 1002 aa9.58□□□□□ -0.88
PCL1YNL289W ATF2P53296 535 aa9.58□□□□□ -0.88
PCL1YNL289W RPN1P38764 993 aaKnown RBP9.57□□□□□ -0.88
PCL1YNL289W AIM7Q12156 149 aa9.57□□□□□ -0.88
PCL1YNL289W BUD20Q08004 166 aaPredicted RBP9.55□□□□□ -0.88
PCL1YNL289W NIS1P53939 407 aa9.53□□□□□ -0.88
PCL1YNL289W TY1A-DR4O74302 440 aa9.5□□□□□ -0.89
PCL1YNL289W TY1A-HP0C2I4 478 aaKnown RBP9.5□□□□□ -0.89
PCL1YNL289W TY1A-AP0CX57 440 aa9.5□□□□□ -0.89
PCL1YNL289W TY1A-PR1P0CX58 440 aa9.5□□□□□ -0.89
PCL1YNL289W TY1A-ORP0CX59 440 aa9.5□□□□□ -0.89
PCL1YNL289W TY1A-PR2P0CX60 440 aa9.5□□□□□ -0.89
PCL1YNL289W TY1A-DR5P0CX65 440 aa9.5□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms