RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeastyeast

Gene PCL1, Length 840 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL1YNL289W MTC1P47018 478 aaKnown RBP17.52■□□□□ 0.4
PCL1YNL289W DRS1P32892 752 aaKnown RBP17.08■□□□□ 0.32
PCL1YNL289W FAP1P53971 965 aa14.89□□□□□ -0.03
PCL1YNL289W DIP2Q12220 943 aaPredicted RBP14.71□□□□□ -0.05
PCL1YNL289W BFR2Q06631 534 aaKnown RBP14.54□□□□□ -0.08
PCL1YNL289W AVT3P36062 692 aa14.41□□□□□ -0.1
PCL1YNL289W PRI1P10363 409 aa14.36□□□□□ -0.11
PCL1YNL289W ISW2Q08773 1120 aa14.31□□□□□ -0.12
PCL1YNL289W RPG1P38249 964 aaKnown RBP14.18□□□□□ -0.14
PCL1YNL289W AAD16Q02895 342 aa14.15□□□□□ -0.14
PCL1YNL289W RSE1Q04693 1361 aaKnown RBP14□□□□□ -0.17
PCL1YNL289W PRY3P47033 881 aa13.98□□□□□ -0.17
PCL1YNL289W TSR3Q12094 313 aaKnown RBP13.61□□□□□ -0.23
PCL1YNL289W RPL17AP05740 184 aaKnown RBP13.53□□□□□ -0.24
PCL1YNL289W RPL17BP46990 184 aaKnown RBP13.53□□□□□ -0.24
PCL1YNL289W REB1P21538 810 aa13.36□□□□□ -0.27
PCL1YNL289W TFA1P36100 482 aa13.35□□□□□ -0.27
PCL1YNL289W YCK3P39962 524 aa13.33□□□□□ -0.28
PCL1YNL289W HAA1Q12753 694 aaKnown RBP13.14□□□□□ -0.31
PCL1YNL289W SPT21P35209 758 aa13.04□□□□□ -0.32
PCL1YNL289W MRPL32P25348 183 aa13.03□□□□□ -0.32
PCL1YNL289W RIM101P33400 625 aa12.73□□□□□ -0.37
PCL1YNL289W YKR023WP36119 530 aaKnown RBP12.72□□□□□ -0.37
PCL1YNL289W CDC27P38042 758 aa12.59□□□□□ -0.39
PCL1YNL289W HOP09932 586 aa12.45□□□□□ -0.42
PCL1YNL289W TFC8Q12308 588 aa12.44□□□□□ -0.42
PCL1YNL289W DCD1P06773 312 aa12.39□□□□□ -0.43
PCL1YNL289W OXP1P28273 1286 aa12.35□□□□□ -0.43
PCL1YNL289W YGL015CP33199 130 aa12.28□□□□□ -0.44
PCL1YNL289W MAP2P38174 421 aaKnown RBP12.09□□□□□ -0.47
PCL1YNL289W YIL055CP40523 627 aaKnown RBP12.08□□□□□ -0.48
PCL1YNL289W UBP10P53874 792 aaPredicted RBP12.08□□□□□ -0.48
PCL1YNL289W BCH2P36122 765 aa12.07□□□□□ -0.48
PCL1YNL289W PTP3P40048 928 aa12.06□□□□□ -0.48
PCL1YNL289W YAH1Q12184 172 aaKnown RBP12.05□□□□□ -0.48
PCL1YNL289W SCY1P53009 804 aa11.97□□□□□ -0.49
PCL1YNL289W RSM7P47150 247 aa11.94□□□□□ -0.5
PCL1YNL289W SSP1P38871 571 aa11.91□□□□□ -0.5
PCL1YNL289W YLR271WQ06152 274 aa11.9□□□□□ -0.5
PCL1YNL289W EPS1P40557 701 aa11.82□□□□□ -0.52
PCL1YNL289W AI2P03876 854 aa11.77□□□□□ -0.53
PCL1YNL289W SLX5P32828 619 aaKnown RBP11.75□□□□□ -0.53
PCL1YNL289W BDF1P35817 686 aa11.75□□□□□ -0.53
PCL1YNL289W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.73□□□□□ -0.53not detected
PCL1YNL289W BBC1P47068 1157 aa11.69□□□□□ -0.54
PCL1YNL289W PSD2P53037 1138 aaKnown RBP11.64□□□□□ -0.55
PCL1YNL289W MGA2P40578 1113 aa11.54□□□□□ -0.56
PCL1YNL289W TIF4632P39936 914 aaKnown RBP11.53□□□□□ -0.56
PCL1YNL289W CST9Q06032 482 aa11.52□□□□□ -0.57
PCL1YNL289W TGL3P40308 642 aa11.5□□□□□ -0.57
PCL1YNL289W MRM1P25270 412 aa11.39□□□□□ -0.59
PCL1YNL289W NSR1P27476 414 aaKnown RBP RIP-Chip data11.24□□□□□ -0.61not detected
PCL1YNL289W RCR1P38212 213 aa11.19□□□□□ -0.62
PCL1YNL289W RTG3P38165 486 aa11.18□□□□□ -0.62
PCL1YNL289W VPS29P38759 282 aa11.15□□□□□ -0.62
PCL1YNL289W YAP5P40574 245 aa11.15□□□□□ -0.62
PCL1YNL289W MST1P07236 462 aa11.13□□□□□ -0.63
PCL1YNL289W YOR238WQ08634 303 aa11.12□□□□□ -0.63
PCL1YNL289W YMR1P47147 688 aaKnown RBP RIP-Chip data11.05□□□□□ -0.64not detected
PCL1YNL289W RAM2P29703 316 aa11.04□□□□□ -0.64
PCL1YNL289W PIB1Q06651 286 aa11.02□□□□□ -0.65
PCL1YNL289W STS1P38637 319 aa11.01□□□□□ -0.65
PCL1YNL289W DBP1P24784 617 aaKnown RBP10.99□□□□□ -0.65
PCL1YNL289W YFR006WP43590 535 aa10.98□□□□□ -0.65
PCL1YNL289W BUD31P25337 157 aaPredicted RBP10.96□□□□□ -0.65
PCL1YNL289W MAK11P20484 414 aaKnown RBP10.88□□□□□ -0.67
PCL1YNL289W UBP9P39967 754 aa10.88□□□□□ -0.67
PCL1YNL289W GTT3P39996 337 aa10.85□□□□□ -0.67
PCL1YNL289W YBL029C-AQ3E756 94 aa10.84□□□□□ -0.67
PCL1YNL289W VMA1P17255 1071 aaKnown RBP10.82□□□□□ -0.68
PCL1YNL289W DMA1P38823 416 aa10.8□□□□□ -0.68
PCL1YNL289W WSC3Q12215 556 aa10.79□□□□□ -0.68
PCL1YNL289W VNX1P42839 908 aa10.76□□□□□ -0.69
PCL1YNL289W EDS1P38073 919 aa10.74□□□□□ -0.69
PCL1YNL289W SAM3Q08986 587 aa10.74□□□□□ -0.69
PCL1YNL289W COQ8P27697 501 aa10.73□□□□□ -0.69
PCL1YNL289W MIF2P35201 549 aa10.72□□□□□ -0.69
PCL1YNL289W YOL036WQ08206 761 aa10.7□□□□□ -0.7
PCL1YNL289W SET4P42948 560 aa10.66□□□□□ -0.7
PCL1YNL289W PTC3P34221 468 aaKnown RBP10.64□□□□□ -0.71
PCL1YNL289W SET1P38827 1080 aaKnown RBP10.64□□□□□ -0.71
PCL1YNL289W SPP1Q03012 353 aa10.64□□□□□ -0.71
PCL1YNL289W MSB4Q12317 492 aa10.64□□□□□ -0.71
PCL1YNL289W RQC2Q12532 1038 aaKnown RBP10.63□□□□□ -0.71
PCL1YNL289W TIF11P38912 153 aaKnown RBP10.62□□□□□ -0.71
PCL1YNL289W GYP5Q12344 894 aa10.6□□□□□ -0.71
PCL1YNL289W NOP53Q12080 455 aaKnown RBP10.57□□□□□ -0.72
PCL1YNL289W ULI1P43604 169 aa10.55□□□□□ -0.72
PCL1YNL289W GRE2Q12068 342 aaKnown RBP10.55□□□□□ -0.72
PCL1YNL289W EAP1P36041 632 aaKnown RBP10.52□□□□□ -0.73
PCL1YNL289W IOC2Q12072 812 aa10.52□□□□□ -0.73
PCL1YNL289W TRP5P00931 707 aaKnown RBP10.51□□□□□ -0.73
PCL1YNL289W ABP1P15891 592 aaKnown RBP10.51□□□□□ -0.73
PCL1YNL289W DCW1P36091 449 aa10.51□□□□□ -0.73
PCL1YNL289W ATH1P48016 1211 aa10.51□□□□□ -0.73
PCL1YNL289W GUT1P32190 709 aa10.49□□□□□ -0.73
PCL1YNL289W SIS1P25294 352 aaKnown RBP10.48□□□□□ -0.73
PCL1YNL289W HTA1P04911 132 aaKnown RBP10.46□□□□□ -0.73
PCL1YNL289W HTA2P04912 132 aa10.46□□□□□ -0.73
PCL1YNL289W YPR148CQ06523 435 aa10.45□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms