RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeastyeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC2YNL272C UFD4P33202 1483 aa6.51□□□□□ -1.37
SEC2YNL272C BPT1P14772 1559 aa6.51□□□□□ -1.37
SEC2YNL272C VMA1P17255 1071 aaKnown RBP6.5□□□□□ -1.37
SEC2YNL272C YPR148CQ06523 435 aa6.49□□□□□ -1.37
SEC2YNL272C SCC2Q04002 1493 aa6.49□□□□□ -1.37
SEC2YNL272C RPO31P04051 1460 aa6.46□□□□□ -1.38
SEC2YNL272C PTC3P34221 468 aaKnown RBP6.45□□□□□ -1.38
SEC2YNL272C VPS70P47161 811 aa6.44□□□□□ -1.38
SEC2YNL272C NOP53Q12080 455 aaKnown RBP6.42□□□□□ -1.38
SEC2YNL272C SAM3Q08986 587 aa6.42□□□□□ -1.38
SEC2YNL272C IFH1P39520 1085 aa6.41□□□□□ -1.38
SEC2YNL272C POL1P13382 1468 aa6.41□□□□□ -1.38
SEC2YNL272C GTT3P39996 337 aa6.41□□□□□ -1.38
SEC2YNL272C YCF1P39109 1515 aaKnown RBP6.4□□□□□ -1.38
SEC2YNL272C STU1P38198 1513 aa6.4□□□□□ -1.39
SEC2YNL272C TOP2P06786 1428 aaKnown RBP6.39□□□□□ -1.39
SEC2YNL272C RKR1Q04781 1562 aa6.38□□□□□ -1.39
SEC2YNL272C YOL036WQ08206 761 aa6.37□□□□□ -1.39
SEC2YNL272C CHD1P32657 1468 aa6.36□□□□□ -1.39
SEC2YNL272C GRE2Q12068 342 aaKnown RBP6.36□□□□□ -1.39
SEC2YNL272C YBL029C-AQ3E756 94 aa6.36□□□□□ -1.39
SEC2YNL272C SET4P42948 560 aa6.35□□□□□ -1.39
SEC2YNL272C WSC3Q12215 556 aa6.35□□□□□ -1.39
SEC2YNL272C CKB1P43639 278 aa6.34□□□□□ -1.39
SEC2YNL272C GYP5Q12344 894 aa6.34□□□□□ -1.39
SEC2YNL272C YOR1P53049 1477 aa6.34□□□□□ -1.39
SEC2YNL272C ATH1P48016 1211 aa6.34□□□□□ -1.39
SEC2YNL272C TY2B-LR1P0C2J3 1770 aa6.33□□□□□ -1.4
SEC2YNL272C TY2B-FP0CX63 1770 aa6.33□□□□□ -1.4
SEC2YNL272C TY2B-GR2P0CX64 1770 aa6.33□□□□□ -1.4
SEC2YNL272C TY2B-CP25384 1770 aa6.33□□□□□ -1.4
SEC2YNL272C TY2B-DR2Q03494 1770 aa6.33□□□□□ -1.4
SEC2YNL272C TY1B-DR1Q03855 1755 aa6.33□□□□□ -1.4
SEC2YNL272C TY2B-DR3Q07791 1770 aaKnown RBP6.33□□□□□ -1.4
SEC2YNL272C TY2B-OR1Q12113 1770 aa6.33□□□□□ -1.4
SEC2YNL272C TY2B-DR1Q12472 1770 aa6.33□□□□□ -1.4
SEC2YNL272C TY2B-OR2Q12501 1770 aa6.33□□□□□ -1.4
SEC2YNL272C GUT1P32190 709 aa6.33□□□□□ -1.4
SEC2YNL272C CDC25P04821 1589 aa6.32□□□□□ -1.4
SEC2YNL272C SMC4Q12267 1418 aa6.32□□□□□ -1.4
SEC2YNL272C LEU3P08638 886 aa6.32□□□□□ -1.4
SEC2YNL272C SOL3P38858 249 aa6.31□□□□□ -1.4
SEC2YNL272C YTA7P40340 1379 aa6.3□□□□□ -1.4
SEC2YNL272C PAN1P32521 1480 aa6.3□□□□□ -1.4
SEC2YNL272C MMS22Q06164 1454 aa6.3□□□□□ -1.4
SEC2YNL272C DCW1P36091 449 aa6.3□□□□□ -1.4
SEC2YNL272C VNX1P42839 908 aa6.3□□□□□ -1.4
SEC2YNL272C PBS2P08018 668 aa6.29□□□□□ -1.4
SEC2YNL272C SPB4P25808 606 aaPredicted RBP6.29□□□□□ -1.4
SEC2YNL272C NST1P53935 1240 aa6.29□□□□□ -1.4
SEC2YNL272C MSB4Q12317 492 aa6.29□□□□□ -1.4
SEC2YNL272C REF2P42073 533 aaPredicted RBP6.28□□□□□ -1.4
SEC2YNL272C DNF1P32660 1571 aa6.28□□□□□ -1.4
SEC2YNL272C DSF2P38213 736 aa6.27□□□□□ -1.41
SEC2YNL272C YGR273CP53329 174 aa6.27□□□□□ -1.41
SEC2YNL272C SPP41P38904 1435 aa6.27□□□□□ -1.41
SEC2YNL272C TY1B-DR3Q99231 1755 aa6.27□□□□□ -1.41
SEC2YNL272C VHR2P40041 505 aa6.27□□□□□ -1.41
SEC2YNL272C TY1B-BRQ12193 1756 aa6.26□□□□□ -1.41
SEC2YNL272C TY1B-GR3Q12316 1755 aa6.26□□□□□ -1.41
SEC2YNL272C TY1B-ORQ92393 1755 aa6.26□□□□□ -1.41
SEC2YNL272C UBP14P38237 781 aaKnown RBP6.26□□□□□ -1.41
SEC2YNL272C TY2B-BQ12491 1770 aa6.26□□□□□ -1.41
SEC2YNL272C UBP9P39967 754 aa6.25□□□□□ -1.41
SEC2YNL272C HTA1P04911 132 aaKnown RBP6.25□□□□□ -1.41
SEC2YNL272C HTA2P04912 132 aa6.25□□□□□ -1.41
SEC2YNL272C ABP1P15891 592 aaKnown RBP6.25□□□□□ -1.41
SEC2YNL272C YLR326WQ06170 240 aaKnown RBP6.25□□□□□ -1.41
SEC2YNL272C YDR090CQ03193 310 aa6.24□□□□□ -1.41
SEC2YNL272C TRM732Q03496 1420 aa6.24□□□□□ -1.41
SEC2YNL272C TRP5P00931 707 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C TY1B-HO13535 1793 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-DR5P0C2I2 1755 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-DR6P0C2I3 1755 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-LR2P0C2I5 1755 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-LR3P0C2I6 1755 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C TY1B-PR1P0C2I9 1755 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C TY1B-PR2P0C2J0 1756 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-PR3P0C2J1 1755 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C TY1B-JR1P47098 1755 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-ML2Q03434 1755 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C TY1B-ER1Q03612 1755 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-ML1Q04711 1755 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C TY1B-GR2Q12269 1755 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-OLQ12273 1755 aa6.23□□□□□ -1.41
SEC2YNL272C TY1B-PLQ12414 1755 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C BUD31P25337 157 aaPredicted RBP6.23□□□□□ -1.41
SEC2YNL272C TIF11P38912 153 aaKnown RBP6.23□□□□□ -1.41
SEC2YNL272C MYO4P32492 1471 aa6.23□□□□□ -1.41
SEC2YNL272C ESC1Q03661 1658 aaKnown RBP6.22□□□□□ -1.41
SEC2YNL272C TSC11P40061 1430 aa6.22□□□□□ -1.41
SEC2YNL272C ILV3P39522 585 aaKnown RBP6.22□□□□□ -1.41
SEC2YNL272C SPP1Q03012 353 aa6.22□□□□□ -1.41
SEC2YNL272C YEL023CP39992 682 aa6.21□□□□□ -1.42
SEC2YNL272C ULI1P43604 169 aa6.21□□□□□ -1.42
SEC2YNL272C COX6P00427 148 aa6.2□□□□□ -1.42
SEC2YNL272C KEX1P09620 729 aa6.2□□□□□ -1.42
SEC2YNL272C EAP1P36041 632 aaKnown RBP6.2□□□□□ -1.42
SEC2YNL272C IOC2Q12072 812 aa6.2□□□□□ -1.42
SEC2YNL272C MET5P47169 1442 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms