RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeastyeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA49YNL248C THO2P53552 1597 aaKnown RBP7.96□□□□□ -1.14
RPA49YNL248C NCR1Q12200 1170 aa7.95□□□□□ -1.14
RPA49YNL248C KOG1P38873 1557 aa7.94□□□□□ -1.14
RPA49YNL248C SAM3Q08986 587 aa7.94□□□□□ -1.14
RPA49YNL248C YNL035CP53962 389 aaKnown RBP7.93□□□□□ -1.14
RPA49YNL248C SIN3P22579 1536 aa7.93□□□□□ -1.14
RPA49YNL248C SEC61P32915 480 aa7.91□□□□□ -1.14
RPA49YNL248C RCR1P38212 213 aa7.9□□□□□ -1.14
RPA49YNL248C SSK2P53599 1579 aa7.89□□□□□ -1.15
RPA49YNL248C BUD4P47136 1447 aa7.88□□□□□ -1.15
RPA49YNL248C SKI3P17883 1432 aaKnown RBP7.86□□□□□ -1.15
RPA49YNL248C ECM5Q03214 1411 aa7.86□□□□□ -1.15
RPA49YNL248C MYO2P19524 1574 aaKnown RBP7.84□□□□□ -1.15
RPA49YNL248C ESP1Q03018 1630 aa7.83□□□□□ -1.16
RPA49YNL248C DAN4P47179 1161 aa7.82□□□□□ -1.16
RPA49YNL248C JIP4Q03361 876 aa7.79□□□□□ -1.16
RPA49YNL248C GYP5Q12344 894 aa7.79□□□□□ -1.16
RPA49YNL248C TFG1P41895 735 aaPredicted RBP7.78□□□□□ -1.16
RPA49YNL248C ABP1P15891 592 aaKnown RBP7.77□□□□□ -1.17
RPA49YNL248C ATG2P53855 1592 aa7.76□□□□□ -1.17
RPA49YNL248C SAP30P38429 201 aa7.76□□□□□ -1.17
RPA49YNL248C STU1P38198 1513 aa7.74□□□□□ -1.17
RPA49YNL248C HTA1P04911 132 aaKnown RBP7.74□□□□□ -1.17
RPA49YNL248C HTA2P04912 132 aa7.74□□□□□ -1.17
RPA49YNL248C DCW1P36091 449 aa7.74□□□□□ -1.17
RPA49YNL248C YDL129WQ07555 291 aa7.73□□□□□ -1.17
RPA49YNL248C SAS10Q12136 610 aaPredicted RBP7.73□□□□□ -1.17
RPA49YNL248C POL1P13382 1468 aa7.73□□□□□ -1.17
RPA49YNL248C MMS22Q06164 1454 aa7.73□□□□□ -1.17
RPA49YNL248C YPK9Q12697 1472 aa7.73□□□□□ -1.17
RPA49YNL248C YTA7P40340 1379 aa7.72□□□□□ -1.17
RPA49YNL248C CHD1P32657 1468 aa7.71□□□□□ -1.18
RPA49YNL248C MDS3P53094 1487 aa7.71□□□□□ -1.18
RPA49YNL248C PTC4P38089 393 aa7.71□□□□□ -1.18
RPA49YNL248C YEL023CP39992 682 aa7.7□□□□□ -1.18
RPA49YNL248C CHL1P22516 861 aaPredicted RBP7.68□□□□□ -1.18
RPA49YNL248C PEP1P32319 1579 aa7.67□□□□□ -1.18
RPA49YNL248C BCK2P33306 851 aa7.66□□□□□ -1.18
RPA49YNL248C PRE3P38624 215 aa7.66□□□□□ -1.18
RPA49YNL248C SCC2Q04002 1493 aa7.65□□□□□ -1.18
RPA49YNL248C RKR1Q04781 1562 aa7.65□□□□□ -1.18
RPA49YNL248C BPT1P14772 1559 aa7.63□□□□□ -1.19
RPA49YNL248C YOR1P53049 1477 aa7.62□□□□□ -1.19
RPA49YNL248C RPO31P04051 1460 aa7.62□□□□□ -1.19
RPA49YNL248C UFD4P33202 1483 aa7.62□□□□□ -1.19
RPA49YNL248C GRE2Q12068 342 aaKnown RBP7.61□□□□□ -1.19
RPA49YNL248C TAF7Q05021 590 aa7.6□□□□□ -1.19
RPA49YNL248C RQC2Q12532 1038 aaKnown RBP7.6□□□□□ -1.19
RPA49YNL248C YDR344CQ05510 147 aa7.59□□□□□ -1.19
RPA49YNL248C TOP2P06786 1428 aaKnown RBP7.59□□□□□ -1.19
RPA49YNL248C MYO4P32492 1471 aa7.57□□□□□ -1.2
RPA49YNL248C RAM2P29703 316 aa7.57□□□□□ -1.2
RPA49YNL248C SMC4Q12267 1418 aa7.57□□□□□ -1.2
RPA49YNL248C MAK11P20484 414 aaKnown RBP7.56□□□□□ -1.2
RPA49YNL248C MIF2P35201 549 aa7.56□□□□□ -1.2
RPA49YNL248C EDS1P38073 919 aa7.56□□□□□ -1.2
RPA49YNL248C PML39Q03760 334 aa7.56□□□□□ -1.2
RPA49YNL248C YCF1P39109 1515 aaKnown RBP7.54□□□□□ -1.2
RPA49YNL248C PTC3P34221 468 aaKnown RBP7.54□□□□□ -1.2
RPA49YNL248C STH1P32597 1359 aa7.54□□□□□ -1.2
RPA49YNL248C GUT1P32190 709 aa7.53□□□□□ -1.2
RPA49YNL248C IFH1P39520 1085 aa7.52□□□□□ -1.21
RPA49YNL248C ATH1P48016 1211 aa7.52□□□□□ -1.21
RPA49YNL248C NST1P53935 1240 aa7.52□□□□□ -1.21
RPA49YNL248C VRP1P37370 817 aa7.5□□□□□ -1.21
RPA49YNL248C ELP4Q02884 456 aaKnown RBP7.49□□□□□ -1.21
RPA49YNL248C SNQ2P32568 1501 aaKnown RBP7.48□□□□□ -1.21
RPA49YNL248C XDJ1P39102 459 aa7.48□□□□□ -1.21
RPA49YNL248C COQ8P27697 501 aa7.47□□□□□ -1.21
RPA49YNL248C SOL3P38858 249 aa7.47□□□□□ -1.21
RPA49YNL248C MID1P41821 548 aa7.46□□□□□ -1.22
RPA49YNL248C IKI3Q06706 1349 aaKnown RBP7.46□□□□□ -1.22
RPA49YNL248C TY2B-LR1P0C2J3 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TY2B-FP0CX63 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TY2B-GR2P0CX64 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TY2B-CP25384 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TY2B-DR2Q03494 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TY1B-DR1Q03855 1755 aa7.46□□□□□ -1.22
RPA49YNL248C TY2B-DR3Q07791 1770 aaKnown RBP7.46□□□□□ -1.22
RPA49YNL248C TY2B-OR1Q12113 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TY2B-DR1Q12472 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TY2B-OR2Q12501 1770 aa7.46□□□□□ -1.22
RPA49YNL248C TRM732Q03496 1420 aa7.45□□□□□ -1.22
RPA49YNL248C ARH1P48360 493 aa7.45□□□□□ -1.22
RPA49YNL248C SPP41P38904 1435 aa7.44□□□□□ -1.22
RPA49YNL248C TY1B-DR3Q99231 1755 aa7.43□□□□□ -1.22
RPA49YNL248C MPH3P0CE00 602 aa7.41□□□□□ -1.22
RPA49YNL248C AI4P03878 556 aa7.4□□□□□ -1.22
RPA49YNL248C TY2B-BQ12491 1770 aa7.4□□□□□ -1.23
RPA49YNL248C MLP2P40457 1679 aa7.39□□□□□ -1.23
RPA49YNL248C PDR15Q04182 1529 aaKnown RBP7.39□□□□□ -1.23
RPA49YNL248C ILV3P39522 585 aaKnown RBP7.39□□□□□ -1.23
RPA49YNL248C RTT106P40161 455 aa7.39□□□□□ -1.23
RPA49YNL248C TSC11P40061 1430 aa7.38□□□□□ -1.23
RPA49YNL248C GEA1P47102 1408 aaPredicted RBP7.38□□□□□ -1.23
RPA49YNL248C SPT23P35210 1082 aa7.36□□□□□ -1.23
RPA49YNL248C CDC25P04821 1589 aa7.36□□□□□ -1.23
RPA49YNL248C VTH1P40438 1549 aa7.36□□□□□ -1.23
RPA49YNL248C VTH2P40890 1549 aa7.36□□□□□ -1.23
RPA49YNL248C PAN1P32521 1480 aa7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms