RNA–Protein interactions for RNA: YNL245C

CWC25, Transcript of Splicing factor required for the first step of pre-mRNA splicing, yeastyeast

Gene CWC25, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWC25YNL245C YGR273CP53329 174 aa10.71□□□□□ -0.69
CWC25YNL245C YNR021WP53723 404 aaKnown RBP10.71□□□□□ -0.69
CWC25YNL245C DCW1P36091 449 aa10.7□□□□□ -0.7
CWC25YNL245C UBP14P38237 781 aaKnown RBP10.7□□□□□ -0.7
CWC25YNL245C YLR326WQ06170 240 aaKnown RBP10.69□□□□□ -0.7
CWC25YNL245C NUP42P49686 430 aaKnown RBP10.68□□□□□ -0.7
CWC25YNL245C YDR090CQ03193 310 aa10.68□□□□□ -0.7
CWC25YNL245C DIT2P21595 489 aa10.67□□□□□ -0.7
CWC25YNL245C SOL3P38858 249 aa10.67□□□□□ -0.7
CWC25YNL245C WSC3Q12215 556 aa10.67□□□□□ -0.7
CWC25YNL245C ABP1P15891 592 aaKnown RBP10.66□□□□□ -0.7
CWC25YNL245C GLC3P32775 704 aa10.65□□□□□ -0.7
CWC25YNL245C MSB4Q12317 492 aa10.63□□□□□ -0.71
CWC25YNL245C HTA1P04911 132 aaKnown RBP10.62□□□□□ -0.71
CWC25YNL245C HTA2P04912 132 aa10.62□□□□□ -0.71
CWC25YNL245C KIC1P38692 1080 aa10.62□□□□□ -0.71
CWC25YNL245C KEX1P09620 729 aa10.61□□□□□ -0.71
CWC25YNL245C KIN1P13185 1064 aa10.6□□□□□ -0.71
CWC25YNL245C RAD54P32863 898 aa10.6□□□□□ -0.71
CWC25YNL245C DMA2P53924 522 aa10.59□□□□□ -0.71
CWC25YNL245C NST1P53935 1240 aa10.59□□□□□ -0.71
CWC25YNL245C PCS60P38137 543 aaKnown RBP RIP-Chip data10.57□□□□□ -0.72not detected
CWC25YNL245C AIM7Q12156 149 aa10.57□□□□□ -0.72
CWC25YNL245C YBL029C-AQ3E756 94 aa10.56□□□□□ -0.72
CWC25YNL245C ATF2P53296 535 aa10.53□□□□□ -0.72
CWC25YNL245C AI4P03878 556 aa10.51□□□□□ -0.73
CWC25YNL245C MPH3P0CE00 602 aa10.51□□□□□ -0.73
CWC25YNL245C EAP1P36041 632 aaKnown RBP10.51□□□□□ -0.73
CWC25YNL245C ILV3P39522 585 aaKnown RBP10.51□□□□□ -0.73
CWC25YNL245C YEL023CP39992 682 aa10.51□□□□□ -0.73
CWC25YNL245C VNX1P42839 908 aa10.51□□□□□ -0.73
CWC25YNL245C TRP5P00931 707 aaKnown RBP10.48□□□□□ -0.73
CWC25YNL245C UBP9P39967 754 aa10.45□□□□□ -0.74
CWC25YNL245C PSE1P32337 1089 aaKnown RBP10.44□□□□□ -0.74
CWC25YNL245C TIF11P38912 153 aaKnown RBP10.44□□□□□ -0.74
CWC25YNL245C ULI1P43604 169 aa10.44□□□□□ -0.74
CWC25YNL245C DAN4P47179 1161 aa10.44□□□□□ -0.74
CWC25YNL245C PTC4P38089 393 aa10.43□□□□□ -0.74
CWC25YNL245C ORC6P38826 435 aa10.43□□□□□ -0.74
CWC25YNL245C SPP1Q03012 353 aa10.43□□□□□ -0.74
CWC25YNL245C SLI15P38283 698 aa10.4□□□□□ -0.74
CWC25YNL245C JIP4Q03361 876 aa10.39□□□□□ -0.75
CWC25YNL245C GUA1P38625 525 aaKnown RBP10.38□□□□□ -0.75
CWC25YNL245C IOC2Q12072 812 aa10.35□□□□□ -0.75
CWC25YNL245C RGR1P19263 1082 aa10.32□□□□□ -0.76
CWC25YNL245C RPP1BP10622 106 aaKnown RBP10.31□□□□□ -0.76
CWC25YNL245C TEA1P47988 759 aa10.31□□□□□ -0.76
CWC25YNL245C YNL035CP53962 389 aaKnown RBP10.31□□□□□ -0.76
CWC25YNL245C CDC73Q06697 393 aa10.31□□□□□ -0.76
CWC25YNL245C MVP1P40959 511 aaKnown RBP10.3□□□□□ -0.76
CWC25YNL245C HGH1P48362 394 aaKnown RBP10.29□□□□□ -0.76
CWC25YNL245C GAP1P19145 602 aaPredicted RBP10.28□□□□□ -0.76
CWC25YNL245C CSC1Q06538 782 aa10.28□□□□□ -0.76
CWC25YNL245C LDB19Q12502 818 aa10.28□□□□□ -0.76
CWC25YNL245C PML39Q03760 334 aa10.27□□□□□ -0.77
CWC25YNL245C RTG1P32607 177 aa10.26□□□□□ -0.77
CWC25YNL245C MID1P41821 548 aa10.26□□□□□ -0.77
CWC25YNL245C HPC2Q01448 625 aa10.25□□□□□ -0.77
CWC25YNL245C CLB5P30283 435 aa10.24□□□□□ -0.77
CWC25YNL245C CSN12P47130 423 aa10.23□□□□□ -0.77
CWC25YNL245C PEX21P50091 288 aa10.22□□□□□ -0.77
CWC25YNL245C YPR109WQ06104 294 aa10.22□□□□□ -0.77
CWC25YNL245C SEC61P32915 480 aa10.21□□□□□ -0.77
CWC25YNL245C TFB4Q12004 338 aa10.21□□□□□ -0.77
CWC25YNL245C SSA2P10592 639 aaKnown RBP10.2□□□□□ -0.78
CWC25YNL245C TFB3Q03290 321 aa10.2□□□□□ -0.78
CWC25YNL245C DPL1Q05567 589 aa10.2□□□□□ -0.78
CWC25YNL245C MPC54Q08550 464 aa10.19□□□□□ -0.78
CWC25YNL245C RLF2Q12495 606 aa10.18□□□□□ -0.78
CWC25YNL245C NIS1P53939 407 aa10.17□□□□□ -0.78
CWC25YNL245C PEX29Q03370 554 aa10.17□□□□□ -0.78
CWC25YNL245C TUM1Q08686 304 aaKnown RBP10.17□□□□□ -0.78
CWC25YNL245C BRL1P38770 471 aa10.16□□□□□ -0.78
CWC25YNL245C TFG1P41895 735 aaPredicted RBP10.16□□□□□ -0.78
CWC25YNL245C TYW1Q08960 810 aaKnown RBP10.16□□□□□ -0.78
CWC25YNL245C KTR1P27810 393 aaKnown RBP10.15□□□□□ -0.78
CWC25YNL245C BUD31P25337 157 aaPredicted RBP10.14□□□□□ -0.79
CWC25YNL245C YMR196WQ04336 1088 aa10.14□□□□□ -0.79
CWC25YNL245C NCR1Q12200 1170 aa10.14□□□□□ -0.79
CWC25YNL245C FPK1P53739 893 aa10.13□□□□□ -0.79
CWC25YNL245C PKC1P24583 1151 aa10.11□□□□□ -0.79
CWC25YNL245C ISU2Q12056 156 aa10.11□□□□□ -0.79
CWC25YNL245C YRR1Q12172 810 aa10.11□□□□□ -0.79
CWC25YNL245C NMA111P53920 997 aa10.1□□□□□ -0.79
CWC25YNL245C YDL129WQ07555 291 aa10.1□□□□□ -0.79
CWC25YNL245C GLN1P32288 370 aaKnown RBP10.09□□□□□ -0.79
CWC25YNL245C HST2P53686 357 aa10.09□□□□□ -0.79
CWC25YNL245C SCJ1P25303 377 aa10.06□□□□□ -0.8
CWC25YNL245C FKH1P40466 484 aa10.06□□□□□ -0.8
CWC25YNL245C MMP1Q12372 583 aa10.06□□□□□ -0.8
CWC25YNL245C SIT4P20604 311 aa10.04□□□□□ -0.8
CWC25YNL245C ESS1P22696 170 aa10.04□□□□□ -0.8
CWC25YNL245C PKH3Q03306 898 aaPredicted RBP10.03□□□□□ -0.8
CWC25YNL245C SAP30P38429 201 aa10.02□□□□□ -0.81
CWC25YNL245C YJL007CP47080 104 aa9.99□□□□□ -0.81
CWC25YNL245C HAP5Q02516 242 aa9.99□□□□□ -0.81
CWC25YNL245C PDR1P12383 1068 aa9.98□□□□□ -0.81
CWC25YNL245C YJU3P28321 313 aa9.98□□□□□ -0.81
CWC25YNL245C NUD1P32336 851 aa9.98□□□□□ -0.81
CWC25YNL245C RAD59Q12223 238 aa9.98□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms